assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_901827185.1_ASM90182718v1	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	1	442075-443018	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6e,cas5,cas7,cse2gr11,cas8e,cas2,cas1,cas3	DinG,WYL,cas6e,cas5,cas7,cse2gr11,cas8e,cas2,cas1,cas3,c2c9_V-U4,DEDDh,cas14i	Type I-E	CGAGCTATCCCCGCTTGCGCGGGGGAGAC,CGAGCTATCCCCGCTTGCGCGGGGGAGAC,CGAGCTATCCCCGCTTGCGCGGGGGAGAC	29,29,29	0	0	NA	NA	NA:NA:NA	15,15,14	15	TypeI-E	csa3,WYL,DEDDh,DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,cas2,cas1,c2c9_V-U4,cas14i	NA|336aa|up_9|NZ_LR594672.1_432106_433114_+,NA|314aa|up_8|NZ_LR594672.1_433188_434130_-,NA|250aa|up_7|NZ_LR594672.1_434348_435098_-,NA|128aa|up_6|NZ_LR594672.1_435129_435513_-,NA|132aa|down_7|NZ_LR594672.1_463146_463542_+	NA|336aa|up_9|NZ_LR594672.1_432106_433114_+	NA	NA|314aa|up_8|NZ_LR594672.1_433188_434130_-	NA	NA|250aa|up_7|NZ_LR594672.1_434348_435098_-	NA	NA|128aa|up_6|NZ_LR594672.1_435129_435513_-	NA	NA|366aa|up_5|NZ_LR594672.1_435599_436697_-	cd16413, DGQHR_domain, DGQHR motif containing domain	cas6e|218aa|up_4|NZ_LR594672.1_437248_437902_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|226aa|up_3|NZ_LR594672.1_437907_438585_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|390aa|up_2|NZ_LR594672.1_438594_439764_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|163aa|up_1|NZ_LR594672.1_439818_440307_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|524aa|up_0|NZ_LR594672.1_440303_441875_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas2|121aa|down_0|NZ_LR594672.1_443051_443414_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|199aa|down_1|NZ_LR594672.1_443637_444234_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas3|858aa|down_2|NZ_LR594672.1_445248_447822_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|100aa|down_3|NZ_LR594672.1_447977_448277_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|1078aa|down_4|NZ_LR594672.1_448664_451898_-	PRK05672, dnaE2, error-prone DNA polymerase; Validated	NA|341aa|down_5|NZ_LR594672.1_452060_453083_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|3216aa|down_6|NZ_LR594672.1_453392_463040_+	NF012200, choice_anch_D, choice-of-anchor D domain-containing protein	NA|132aa|down_7|NZ_LR594672.1_463146_463542_+	NA	NA|455aa|down_8|NZ_LR594672.1_463951_465316_-	cd03468, PolY_like, DNA Polymerase Y-family	NA|281aa|down_9|NZ_LR594672.1_465260_466103_-	NF033429, ImuA_translesion, translesion DNA synthesis-associated protein ImuA
GCF_901827185.1_ASM90182718v1	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	2	661875-662054	2	CRISPRCasFinder	no		DinG,WYL,cas6e,cas5,cas7,cse2gr11,cas8e,cas2,cas1,cas3,c2c9_V-U4,DEDDh,cas14i	Orphan	TGTGAGCTTTTTGAGGGACCTTC	23	0	0	NA	NA	NA	3	3	Orphan	csa3,WYL,DEDDh,DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,cas2,cas1,c2c9_V-U4,cas14i	NA|115aa|up_6|NZ_LR594672.1_656277_656622_-,NA|185aa|up_5|NZ_LR594672.1_656815_657370_-,NA|383aa|up_3|NZ_LR594672.1_658572_659721_-,NA|163aa|up_0|NZ_LR594672.1_660596_661085_-,NA|253aa|down_1|NZ_LR594672.1_663897_664656_-,NA|143aa|down_3|NZ_LR594672.1_665712_666141_-,NA|94aa|down_4|NZ_LR594672.1_666364_666646_+,NA|98aa|down_5|NZ_LR594672.1_666729_667023_+,NA|235aa|down_6|NZ_LR594672.1_667117_667822_+,NA|140aa|down_7|NZ_LR594672.1_668463_668883_+,NA|115aa|down_8|NZ_LR594672.1_668896_669241_+,NA|110aa|down_9|NZ_LR594672.1_669283_669613_+	NA|342aa|up_9|NZ_LR594672.1_652092_653118_+	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	NA|150aa|up_8|NZ_LR594672.1_653101_653551_+	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|365aa|up_7|NZ_LR594672.1_654258_655353_+	COG4974, XerD, Site-specific recombinase XerD [DNA replication, recombination, and repair]	NA|115aa|up_6|NZ_LR594672.1_656277_656622_-	NA	NA|185aa|up_5|NZ_LR594672.1_656815_657370_-	NA	NA|292aa|up_4|NZ_LR594672.1_657635_658511_+	cd07998, WGR_DNA_ligase, WGR domain of bacterial DNA ligases	NA|383aa|up_3|NZ_LR594672.1_658572_659721_-	NA	NA|104aa|up_2|NZ_LR594672.1_659836_660148_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|74aa|up_1|NZ_LR594672.1_660299_660521_+	pfam09926, DUF2158, Uncharacterized small protein (DUF2158)	NA|163aa|up_0|NZ_LR594672.1_660596_661085_-	NA	NA|501aa|down_0|NZ_LR594672.1_662398_663901_+	pfam01051, Rep_3, Initiator Replication protein	NA|253aa|down_1|NZ_LR594672.1_663897_664656_-	NA	NA|267aa|down_2|NZ_LR594672.1_664922_665723_-	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|143aa|down_3|NZ_LR594672.1_665712_666141_-	NA	NA|94aa|down_4|NZ_LR594672.1_666364_666646_+	NA	NA|98aa|down_5|NZ_LR594672.1_666729_667023_+	NA	NA|235aa|down_6|NZ_LR594672.1_667117_667822_+	NA	NA|140aa|down_7|NZ_LR594672.1_668463_668883_+	NA	NA|115aa|down_8|NZ_LR594672.1_668896_669241_+	NA	NA|110aa|down_9|NZ_LR594672.1_669283_669613_+	NA
GCF_901827185.1_ASM90182718v1	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	3	662061-662218	2,3	PILER-CR,CRISPRCasFinder	no		DinG,WYL,cas6e,cas5,cas7,cse2gr11,cas8e,cas2,cas1,cas3,c2c9_V-U4,DEDDh,cas14i	Orphan	CGACATGTGAGCTTTTTGAGGGACCTAC,TGTGAGCTTTTTGAGGGACCTTC	28,23	0	0	NA	NA	NA:NA	2,2	2	Orphan	csa3,WYL,DEDDh,DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,cas2,cas1,c2c9_V-U4,cas14i	NA|115aa|up_6|NZ_LR594672.1_656277_656622_-,NA|185aa|up_5|NZ_LR594672.1_656815_657370_-,NA|383aa|up_3|NZ_LR594672.1_658572_659721_-,NA|163aa|up_0|NZ_LR594672.1_660596_661085_-,NA|253aa|down_1|NZ_LR594672.1_663897_664656_-,NA|143aa|down_3|NZ_LR594672.1_665712_666141_-,NA|94aa|down_4|NZ_LR594672.1_666364_666646_+,NA|98aa|down_5|NZ_LR594672.1_666729_667023_+,NA|235aa|down_6|NZ_LR594672.1_667117_667822_+,NA|140aa|down_7|NZ_LR594672.1_668463_668883_+,NA|115aa|down_8|NZ_LR594672.1_668896_669241_+,NA|110aa|down_9|NZ_LR594672.1_669283_669613_+	NA|342aa|up_9|NZ_LR594672.1_652092_653118_+	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	NA|150aa|up_8|NZ_LR594672.1_653101_653551_+	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|365aa|up_7|NZ_LR594672.1_654258_655353_+	COG4974, XerD, Site-specific recombinase XerD [DNA replication, recombination, and repair]	NA|115aa|up_6|NZ_LR594672.1_656277_656622_-	NA	NA|185aa|up_5|NZ_LR594672.1_656815_657370_-	NA	NA|292aa|up_4|NZ_LR594672.1_657635_658511_+	cd07998, WGR_DNA_ligase, WGR domain of bacterial DNA ligases	NA|383aa|up_3|NZ_LR594672.1_658572_659721_-	NA	NA|104aa|up_2|NZ_LR594672.1_659836_660148_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|74aa|up_1|NZ_LR594672.1_660299_660521_+	pfam09926, DUF2158, Uncharacterized small protein (DUF2158)	NA|163aa|up_0|NZ_LR594672.1_660596_661085_-	NA	NA|501aa|down_0|NZ_LR594672.1_662398_663901_+	pfam01051, Rep_3, Initiator Replication protein	NA|253aa|down_1|NZ_LR594672.1_663897_664656_-	NA	NA|267aa|down_2|NZ_LR594672.1_664922_665723_-	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|143aa|down_3|NZ_LR594672.1_665712_666141_-	NA	NA|94aa|down_4|NZ_LR594672.1_666364_666646_+	NA	NA|98aa|down_5|NZ_LR594672.1_666729_667023_+	NA	NA|235aa|down_6|NZ_LR594672.1_667117_667822_+	NA	NA|140aa|down_7|NZ_LR594672.1_668463_668883_+	NA	NA|115aa|down_8|NZ_LR594672.1_668896_669241_+	NA	NA|110aa|down_9|NZ_LR594672.1_669283_669613_+	NA
GCF_901827185.1_ASM90182718v1	NZ_LR594671	Variovorax sp. PBL-E5 chromosome 1	1	5577655-5577809	1	CRISPRCasFinder	no		csa3,WYL,DEDDh,DinG,cas3	Orphan	CCGGTCTCGCCCTGTGCGCCGGTGTAGCCGGTATTGCC	38	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,cas2,cas1,c2c9_V-U4,cas14i	NA|84aa|up_3|NZ_LR594671.1_5575301_5575553_-,NA|65aa|down_0|NZ_LR594671.1_5578075_5578270_-,NA|278aa|down_9|NZ_LR594671.1_5587967_5588801_+	NA|223aa|up_9|NZ_LR594671.1_5569958_5570627_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|227aa|up_8|NZ_LR594671.1_5570630_5571311_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|284aa|up_7|NZ_LR594671.1_5571335_5572187_-	cd13621, PBP2_AA_binding_like_3, Substrate-binding domain of putative amino acid-binding protein; the type 2 periplasmic-binding protein fold	NA|317aa|up_6|NZ_LR594671.1_5572244_5573195_-	cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids	NA|261aa|up_5|NZ_LR594671.1_5573228_5574011_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|354aa|up_4|NZ_LR594671.1_5574204_5575266_+	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|84aa|up_3|NZ_LR594671.1_5575301_5575553_-	NA	NA|247aa|up_2|NZ_LR594671.1_5575725_5576466_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|203aa|up_1|NZ_LR594671.1_5576685_5577294_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|91aa|up_0|NZ_LR594671.1_5577304_5577577_-	pfam07369, DUF1488, Protein of unknown function (DUF1488)	NA|65aa|down_0|NZ_LR594671.1_5578075_5578270_-	NA	NA|386aa|down_1|NZ_LR594671.1_5578611_5579769_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|306aa|down_2|NZ_LR594671.1_5579815_5580733_-	PRK12684, PRK12684, CysB family HTH-type transcriptional regulator	NA|501aa|down_3|NZ_LR594671.1_5580844_5582347_+	cd01359, Argininosuccinate_lyase, Argininosuccinate lyase (argininosuccinase, ASAL)	NA|320aa|down_4|NZ_LR594671.1_5582343_5583303_+	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold	NA|315aa|down_5|NZ_LR594671.1_5583345_5584290_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|328aa|down_6|NZ_LR594671.1_5584416_5585400_+	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold	NA|386aa|down_7|NZ_LR594671.1_5585410_5586568_+	PRK08163, PRK08163, 3-hydroxybenzoate 6-monooxygenase	NA|353aa|down_8|NZ_LR594671.1_5586738_5587797_+	cd19091, AKR_PsAKR, Polaromonas Sp	NA|278aa|down_9|NZ_LR594671.1_5587967_5588801_+	NA
