assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_901543415.1_42545_E02	NZ_LR594041	Streptococcus gordonii strain NCTC9124 chromosome 1	1	549038-549118	1	CRISPRCasFinder	no		cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	Orphan	AAGAGGGTCCTTCTCTATCTGAAC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	NA|139aa|up_9|NZ_LR594041.1_537018_537435_-,NA	NA|139aa|up_9|NZ_LR594041.1_537018_537435_-	NA	NA|158aa|up_8|NZ_LR594041.1_537613_538087_+	PRK00464, nrdR, transcriptional repressor NrdR	NA|385aa|up_7|NZ_LR594041.1_538087_539242_+	COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair]	NA|300aa|up_6|NZ_LR594041.1_539242_540142_+	PRK08939, PRK08939, primosomal protein DnaI; Reviewed	NA|239aa|up_5|NZ_LR594041.1_540138_540855_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|437aa|up_4|NZ_LR594041.1_540897_542208_+	PRK00093, PRK00093, GTP-binding protein Der; Reviewed	NA|1030aa|up_3|NZ_LR594041.1_542534_545624_+	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	NA|444aa|up_2|NZ_LR594041.1_546483_547815_+	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional	NA|170aa|up_1|NZ_LR594041.1_547827_548337_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|167aa|up_0|NZ_LR594041.1_548340_548841_+	COG0456, RimI, Acetyltransferases [General function prediction only]	NA|161aa|down_0|NZ_LR594041.1_550645_551128_+	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|311aa|down_1|NZ_LR594041.1_551828_552761_-	PRK02463, PRK02463, OxaA-like protein precursor; Provisional	NA|93aa|down_2|NZ_LR594041.1_552837_553116_-	PRK14434, PRK14434, acylphosphatase; Provisional	NA|247aa|down_3|NZ_LR594041.1_553184_553925_+	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|164aa|down_4|NZ_LR594041.1_553969_554461_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|229aa|down_5|NZ_LR594041.1_554478_555165_+	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|567aa|down_6|NZ_LR594041.1_555649_557350_+	PRK07282, PRK07282, acetolactate synthase large subunit	NA|159aa|down_7|NZ_LR594041.1_557342_557819_+	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|341aa|down_8|NZ_LR594041.1_557910_558933_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|417aa|down_9|NZ_LR594041.1_559119_560370_+	PRK08639, PRK08639, threonine dehydratase; Validated
GCF_901543415.1_42545_E02	NZ_LR594041	Streptococcus gordonii strain NCTC9124 chromosome 1	2	1454423-1457296	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	Type II-C,Type II-A,Type II-B	GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	43,43,22	43	TypeII-C,TypeII-A,TypeII-B	cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	NA,NA	NA|428aa|up_9|NZ_LR594041.1_1442904_1444188_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|305aa|up_8|NZ_LR594041.1_1444325_1445240_-	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases	NA|113aa|up_7|NZ_LR594041.1_1445355_1445694_-	PRK13676, PRK13676, YlbF/YmcA family competence regulator	NA|369aa|up_6|NZ_LR594041.1_1445711_1446818_-	PRK06545, PRK06545, prephenate dehydrogenase; Validated	NA|389aa|up_5|NZ_LR594041.1_1446834_1448001_-	PRK05382, PRK05382, chorismate synthase; Validated	NA|356aa|up_4|NZ_LR594041.1_1448089_1449157_-	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed	NA|286aa|up_3|NZ_LR594041.1_1449235_1450093_-	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|226aa|up_2|NZ_LR594041.1_1450082_1450760_-	PRK02412, aroD, type I 3-dehydroquinate dehydratase	NA|388aa|up_1|NZ_LR594041.1_1450756_1451920_-	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|734aa|up_0|NZ_LR594041.1_1452159_1454361_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	csn2|348aa|down_0|NZ_LR594041.1_1457365_1458409_-	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	cas2|108aa|down_1|NZ_LR594041.1_1458405_1458729_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|308aa|down_2|NZ_LR594041.1_1458718_1459642_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1137aa|down_3|NZ_LR594041.1_1459813_1463224_-	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	NA|116aa|down_4|NZ_LR594041.1_1463629_1463977_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|109aa|down_5|NZ_LR594041.1_1464092_1464419_-	PRK14229, PRK14229, fluoride efflux transporter CrcB	NA|125aa|down_6|NZ_LR594041.1_1464415_1464790_-	PRK14221, PRK14221, fluoride efflux transporter CrcB	NA|89aa|down_7|NZ_LR594041.1_1464786_1465053_-	PRK07248, PRK07248, chorismate mutase	NA|461aa|down_8|NZ_LR594041.1_1465536_1466919_-	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|766aa|down_9|NZ_LR594041.1_1467108_1469406_-	TIGR02104, pulA_typeI, pullulanase, type I
GCF_901543415.1_42545_E02	NZ_LR594041	Streptococcus gordonii strain NCTC9124 chromosome 1	3	1465324-1465410	3	CRISPRCasFinder	no	csn2,cas2,cas1,cas9	cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	Type II-C,Type II-A,Type II-B	GCAACCTAAAACAGTCTCCCGGAC	24	0	0	NA	NA	NA	1	1	TypeII-C,TypeII-A,TypeII-B	cas3,WYL,csm6,csn2,cas2,cas1,cas9,DinG,csa3,DEDDh	NA,NA	NA|388aa|up_9|NZ_LR594041.1_1450756_1451920_-	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|734aa|up_8|NZ_LR594041.1_1452159_1454361_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	csn2|348aa|up_7|NZ_LR594041.1_1457365_1458409_-	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	cas2|108aa|up_6|NZ_LR594041.1_1458405_1458729_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|308aa|up_5|NZ_LR594041.1_1458718_1459642_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1137aa|up_4|NZ_LR594041.1_1459813_1463224_-	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	NA|116aa|up_3|NZ_LR594041.1_1463629_1463977_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|109aa|up_2|NZ_LR594041.1_1464092_1464419_-	PRK14229, PRK14229, fluoride efflux transporter CrcB	NA|125aa|up_1|NZ_LR594041.1_1464415_1464790_-	PRK14221, PRK14221, fluoride efflux transporter CrcB	NA|89aa|up_0|NZ_LR594041.1_1464786_1465053_-	PRK07248, PRK07248, chorismate mutase	NA|461aa|down_0|NZ_LR594041.1_1465536_1466919_-	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|766aa|down_1|NZ_LR594041.1_1467108_1469406_-	TIGR02104, pulA_typeI, pullulanase, type I	NA|319aa|down_2|NZ_LR594041.1_1469424_1470381_-	PRK13055, PRK13055, putative lipid kinase; Reviewed	NA|653aa|down_3|NZ_LR594041.1_1470390_1472349_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|170aa|down_4|NZ_LR594041.1_1472495_1473005_-	COG4708, COG4708, Predicted membrane protein [Function unknown]	NA|146aa|down_5|NZ_LR594041.1_1473165_1473603_+	pfam04138, GtrA, GtrA-like protein	NA|141aa|down_6|NZ_LR594041.1_1473634_1474057_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|236aa|down_7|NZ_LR594041.1_1474156_1474864_-	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|150aa|down_8|NZ_LR594041.1_1474881_1475331_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|298aa|down_9|NZ_LR594041.1_1475545_1476439_-	pfam03631, Virul_fac_BrkB, Virulence factor BrkB
