assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900622505.1_4559	NZ_LR595848	Streptococcus pneumoniae strain 4559 isolate 4559 chromosome 1	1	131582-131677	1	CRISPRCasFinder	no		cas3,DEDDh,DinG	Orphan	AATGTGTAAGATTTTTATATATAA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG	NA|74aa|up_9|NZ_LR595848.1_122176_122398_+,NA|107aa|down_7|NZ_LR595848.1_139455_139776_-	NA|74aa|up_9|NZ_LR595848.1_122176_122398_+	NA	NA|310aa|up_8|NZ_LR595848.1_122716_123646_+	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]	NA|308aa|up_7|NZ_LR595848.1_123659_124583_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|492aa|up_6|NZ_LR595848.1_124686_126162_+	pfam12010, DUF3502, Domain of unknown function (DUF3502)	NA|329aa|up_5|NZ_LR595848.1_126433_127420_+	PRK00142, PRK00142, rhodanese-related sulfurtransferase	NA|287aa|up_4|NZ_LR595848.1_127694_128555_+	pfam14132, DUF4299, Domain of unknown function (DUF4299)	NA|355aa|up_3|NZ_LR595848.1_128626_129691_-	TIGR02223, Cell_division_protein_FtsN, cell division protein FtsN	NA|304aa|up_2|NZ_LR595848.1_129753_130665_-	pfam13349, DUF4097, Putative adhesin	NA|198aa|up_1|NZ_LR595848.1_130657_131251_-	COG4709, COG4709, Predicted membrane protein [Function unknown]	NA|109aa|up_0|NZ_LR595848.1_131237_131564_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|389aa|down_0|NZ_LR595848.1_131702_132869_-	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters	NA|386aa|down_1|NZ_LR595848.1_132926_134084_+	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan	NA|617aa|down_2|NZ_LR595848.1_134125_135976_+	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|211aa|down_3|NZ_LR595848.1_136368_137001_-	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065	NA|291aa|down_4|NZ_LR595848.1_137022_137895_-	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|224aa|down_5|NZ_LR595848.1_137903_138575_-	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism]	NA|196aa|down_6|NZ_LR595848.1_138816_139404_+	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan	NA|107aa|down_7|NZ_LR595848.1_139455_139776_-	NA	NA|96aa|down_8|NZ_LR595848.1_140201_140489_+	TIGR01653, hypothetical_protein, bacteriocin, lactococcin 972 family	NA|703aa|down_9|NZ_LR595848.1_140540_142649_+	TIGR01654, unnamed_protein_product, bacteriocin-associated integral membrane (putative immunity) protein
GCF_900622505.1_4559	NZ_LR595848	Streptococcus pneumoniae strain 4559 isolate 4559 chromosome 1	2	1671663-1678880	2,1	CRT,CRT	no		cas3,DEDDh,DinG	Orphan	GCTTGTTGATGCNGANGT,NGATGTACTTGCTGACGT	18,18	2	2	1675575-1675592|1676355-1676372	NZ_LR595848.1_1679772-1679789|NZ_LR595848.1_1679772-1679789	NA:NA	102,102	102	Orphan	cas3,DEDDh,DinG	NA,NA	NA|504aa|up_9|NZ_LR595848.1_1655218_1656730_-	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA	NA|792aa|up_8|NZ_LR595848.1_1656741_1659117_-	PRK09200, PRK09200, preprotein translocase subunit SecA; Reviewed	NA|160aa|up_7|NZ_LR595848.1_1659106_1659586_-	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3	NA|511aa|up_6|NZ_LR595848.1_1659585_1661118_-	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2	NA|525aa|up_5|NZ_LR595848.1_1661107_1662682_-	pfam16993, Asp1, Accessory Sec system protein Asp1	NA|409aa|up_4|NZ_LR595848.1_1662970_1664197_-	PRK12417, secY, preprotein translocase subunit SecY; Reviewed	NA|336aa|up_3|NZ_LR595848.1_1664284_1665292_-	PRK09814, PRK09814, sugar transferase	NA|1073aa|up_2|NZ_LR595848.1_1665300_1668519_-	TIGR03728, glyco_access_1, glycosyltransferase, SP_1767 family	NA|403aa|up_1|NZ_LR595848.1_1668657_1669866_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|293aa|up_0|NZ_LR595848.1_1669898_1670777_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|154aa|down_0|NZ_LR595848.1_1680469_1680931_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|48aa|down_1|NZ_LR595848.1_1680897_1681041_-	pfam01710, HTH_Tnp_IS630, Transposase	NA|127aa|down_2|NZ_LR595848.1_1681309_1681690_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|74aa|down_3|NZ_LR595848.1_1681787_1682009_+	pfam15507, DUF4649, Domain of unknown function (DUF4649)	NA|105aa|down_4|NZ_LR595848.1_1682025_1682340_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|178aa|down_5|NZ_LR595848.1_1682644_1683178_+	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|223aa|down_6|NZ_LR595848.1_1683432_1684101_-	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|185aa|down_7|NZ_LR595848.1_1684211_1684766_-	pfam10978, DUF2785, Protein of unknown function (DUF2785)	NA|599aa|down_8|NZ_LR595848.1_1685011_1686808_-	cd09609, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|248aa|down_9|NZ_LR595848.1_1686818_1687562_-	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown]
