assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900478265.1_33962_C02	NZ_LS483485	Aggregatibacter aphrophilus strain NCTC11096 chromosome 1	1	1769904-1770045	1	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5	Unclear	ACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGCCTCGTTTCCCGCTCCA	48	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5	NA|266aa|up_8|NZ_LS483485.1_1760066_1760864_+,NA	NA|218aa|up_9|NZ_LS483485.1_1758296_1758950_+	PRK00393, ribA, GTP cyclohydrolase II RibA	NA|266aa|up_8|NZ_LS483485.1_1760066_1760864_+	NA	NA|523aa|up_7|NZ_LS483485.1_1760902_1762471_-	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|122aa|up_6|NZ_LS483485.1_1762509_1762875_-	pfam04304, DUF454, Protein of unknown function (DUF454)	NA|680aa|up_5|NZ_LS483485.1_1763007_1765047_+	PRK10911, PRK10911, oligopeptidase A; Provisional	NA|167aa|up_4|NZ_LS483485.1_1765185_1765686_-	PRK09439, PRK09439, PTS system glucose-specific transporter subunit; Provisional	NA|576aa|up_3|NZ_LS483485.1_1765746_1767474_-	PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase PtsI	NA|86aa|up_2|NZ_LS483485.1_1767613_1767871_-	PRK10850, PRK10850, phosphocarrier protein Hpr	NA|347aa|up_1|NZ_LS483485.1_1768098_1769139_-	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA	DEDDh|182aa|up_0|NZ_LS483485.1_1769210_1769756_+	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|542aa|down_0|NZ_LS483485.1_1770258_1771884_+	cd16017, LptA, Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase	NA|159aa|down_1|NZ_LS483485.1_1772116_1772593_+	PRK10646, PRK10646, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA|497aa|down_2|NZ_LS483485.1_1772606_1774097_+	PRK10431, PRK10431, N-acetylmuramoyl-l-alanine amidase II; Provisional	NA|616aa|down_3|NZ_LS483485.1_1774096_1775944_+	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|318aa|down_4|NZ_LS483485.1_1775949_1776903_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|101aa|down_5|NZ_LS483485.1_1777029_1777332_+	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|438aa|down_6|NZ_LS483485.1_1777415_1778729_+	PRK11058, PRK11058, GTPase HflX; Provisional	NA|320aa|down_7|NZ_LS483485.1_1778725_1779685_-	COG3283, TyrR, Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism]	NA|365aa|down_8|NZ_LS483485.1_1779781_1780876_-	PRK05415, PRK05415, hypothetical protein; Provisional	NA|469aa|down_9|NZ_LS483485.1_1780886_1782293_-	COG3106, COG3106, Predicted ATPase [General function prediction only]
GCF_900478265.1_33962_C02	NZ_LS483485	Aggregatibacter aphrophilus strain NCTC11096 chromosome 1	2	2001339-2001979	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5	Type I-C,Type I-U, Type I-U?	GTTTCAACACACAGCCACCCGAAGGTGGCTGC,GTTTCAACACACAGCCACCCGAAGGTGGCTGC,GTTTCAACACACAGCCACCCGAAGGTGGCTGC	32,32,32	1	1	2001505-2001538	NZ_LS483485.1_2005296-2005263	NA:NA:NA	9,9,8	9	TypeI-C,TypeI-U,TypeI-U?	cas3,DEDDh,DinG,WYL,cas2,cas1,cas4,cas7,cas8c,cas5	NA,NA|171aa|down_2|NZ_LS483485.1_2004195_2004708_-,NA|446aa|down_7|NZ_LS483485.1_2008886_2010224_-	NA|789aa|up_9|NZ_LS483485.1_1984045_1986412_+	pfam07715, Plug, TonB-dependent Receptor Plug Domain	NA|925aa|up_8|NZ_LS483485.1_1986489_1989264_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|111aa|up_7|NZ_LS483485.1_1989330_1989663_-	COG1687, AzlD, Predicted branched-chain amino acid permeases (azaleucine resistance) [Amino acid transport and metabolism]	NA|244aa|up_6|NZ_LS483485.1_1989659_1990391_-	TIGR00346, Uncharacterized_membrane_protein_HI_1738, 4-azaleucine resistance probable transporter AzlC	NA|311aa|up_5|NZ_LS483485.1_1990395_1991328_-	cd08441, PBP2_MetR, The C-terminal substrate binding domain of LysR-type transcriptional regulator metR, which regulates the expression of methionine biosynthetic genes, contains type 2 periplasmic binding fold	NA|758aa|up_4|NZ_LS483485.1_1991592_1993866_+	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional	NA|238aa|up_3|NZ_LS483485.1_1994002_1994716_-	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|1258aa|up_2|NZ_LS483485.1_1994914_1998688_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|264aa|up_1|NZ_LS483485.1_1998697_1999489_+	cd09079, RgfB-like, Streptococcus agalactiae RgfB, part of a putative two component signal transduction system, and related proteins	NA|555aa|up_0|NZ_LS483485.1_1999499_2001164_+	TIGR02003, PTS_system_glucose-specific_IIBC_component, PTS system, IIBC component	cas2|98aa|down_0|NZ_LS483485.1_2002172_2002466_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|338aa|down_1|NZ_LS483485.1_2002540_2003554_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	NA|171aa|down_2|NZ_LS483485.1_2004195_2004708_-	NA	cas4|217aa|down_3|NZ_LS483485.1_2004754_2005405_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|289aa|down_4|NZ_LS483485.1_2005420_2006287_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|597aa|down_5|NZ_LS483485.1_2006298_2008089_-	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas5|226aa|down_6|NZ_LS483485.1_2008085_2008763_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|446aa|down_7|NZ_LS483485.1_2008886_2010224_-	NA	NA|682aa|down_8|NZ_LS483485.1_2010236_2012282_-	COG0433, COG0433,  HerA helicase [Replication, recombination, and repair]	NA|331aa|down_9|NZ_LS483485.1_2012285_2013278_-	pfam01555, N6_N4_Mtase, DNA methylase
