assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900476035.1_53694_C01	NZ_LS483443	Aggregatibacter segnis ATCC 33393 strain NCTC 10977 chromosome 1	1	276173-276708	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,cas1	cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,cas1,cas3,DEDDh,DinG,csa3	Type III-B,Type III-A,Type III-D,Type III-C	GTCGAAAGACCCCGCCCTGTTCCAAAGGGATTAAAAC,GTCGAAAGACCCCGCCCTGTTCCAAAGGGATT,GTCGAAAGACCCCGCCCTGTTCCAAAGGGATT	37,32,32	0	0	NA	NA	NA:NA:NA	7,7,7	7	TypeIII-B,TypeIII-A,TypeIII-D,TypeIII-C	cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,cas1,cas3,DEDDh,DinG,csa3	NA,NA|120aa|down_0|NZ_LS483443.1_277975_278335_+,NA|285aa|down_1|NZ_LS483443.1_278423_279278_+	NA|205aa|up_9|NZ_LS483443.1_264441_265056_-	pfam12836, HHH_3, Helix-hairpin-helix motif	cas10|735aa|up_8|NZ_LS483443.1_265282_267487_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|129aa|up_7|NZ_LS483443.1_267492_267879_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|235aa|up_6|NZ_LS483443.1_267889_268594_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|313aa|up_5|NZ_LS483443.1_268603_269542_+	TIGR01903, Hypothetical_protein	csm5gr7|543aa|up_4|NZ_LS483443.1_269538_271167_+	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas6|308aa|up_3|NZ_LS483443.1_271163_272087_+	cd09760, Cas6_III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	csx16|97aa|up_2|NZ_LS483443.1_272147_272438_+	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548)	csx1|381aa|up_1|NZ_LS483443.1_272446_273589_+	pfam09002, DUF1887, Domain of unknown function (DUF1887)	csx1|385aa|up_0|NZ_LS483443.1_273588_274743_+	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|120aa|down_0|NZ_LS483443.1_277975_278335_+	NA	NA|285aa|down_1|NZ_LS483443.1_278423_279278_+	NA	cas2|95aa|down_2|NZ_LS483443.1_279293_279578_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|357aa|down_3|NZ_LS483443.1_279586_280657_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|96aa|down_4|NZ_LS483443.1_280669_280957_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|857aa|down_5|NZ_LS483443.1_281883_284454_+	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|167aa|down_6|NZ_LS483443.1_284553_285054_-	pfam16747, Adhesin_E, Surface-adhesin protein E	NA|347aa|down_7|NZ_LS483443.1_285238_286279_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|213aa|down_8|NZ_LS483443.1_286278_286917_+	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|272aa|down_9|NZ_LS483443.1_286952_287768_-	cd07517, HAD_HPP, phosphatase, similar to Bacteroides thetaiotaomicron VPI-5482 BT4131 hexose phosphate phosphatase; belongs to the haloacid dehalogenase-like superfamily
GCF_900476035.1_53694_C01	NZ_LS483443	Aggregatibacter segnis ATCC 33393 strain NCTC 10977 chromosome 1	2	281174-281707	2,2,2,3	PILER-CR,CRISPRCasFinder,CRT,CRISPRCasFinder	no	cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,cas1	cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,cas1,cas3,DEDDh,DinG,csa3	Type III-B,Type III-A,Type III-D,Type III-C	CAGTCGAAAGACCTTGCCCTGTTCCAAAGGGATTAAGACTTCTC,GTCGAAAGACCTTGCCCTGTTCCAAAGGGATTAAGACT,GCCCTGNTCCAAAGGGATTNANACT,GTCGAAAGACCTTGCCCTGTTCCAAAGGGATTAAGACT	44,38,25,38	0	0	NA	NA	NA:NA:NA:NA	2,5,7,5	7	TypeIII-B,TypeIII-A,TypeIII-D,TypeIII-C	cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,cas1,cas3,DEDDh,DinG,csa3	NA|120aa|up_4|NZ_LS483443.1_277975_278335_+,NA|285aa|up_3|NZ_LS483443.1_278423_279278_+,NA	csm5gr7|543aa|up_9|NZ_LS483443.1_269538_271167_+	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas6|308aa|up_8|NZ_LS483443.1_271163_272087_+	cd09760, Cas6_III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	csx16|97aa|up_7|NZ_LS483443.1_272147_272438_+	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548)	csx1|381aa|up_6|NZ_LS483443.1_272446_273589_+	pfam09002, DUF1887, Domain of unknown function (DUF1887)	csx1|385aa|up_5|NZ_LS483443.1_273588_274743_+	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|120aa|up_4|NZ_LS483443.1_277975_278335_+	NA	NA|285aa|up_3|NZ_LS483443.1_278423_279278_+	NA	cas2|95aa|up_2|NZ_LS483443.1_279293_279578_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|357aa|up_1|NZ_LS483443.1_279586_280657_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|96aa|up_0|NZ_LS483443.1_280669_280957_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|857aa|down_0|NZ_LS483443.1_281883_284454_+	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|167aa|down_1|NZ_LS483443.1_284553_285054_-	pfam16747, Adhesin_E, Surface-adhesin protein E	NA|347aa|down_2|NZ_LS483443.1_285238_286279_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|213aa|down_3|NZ_LS483443.1_286278_286917_+	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|272aa|down_4|NZ_LS483443.1_286952_287768_-	cd07517, HAD_HPP, phosphatase, similar to Bacteroides thetaiotaomicron VPI-5482 BT4131 hexose phosphate phosphatase; belongs to the haloacid dehalogenase-like superfamily	NA|229aa|down_5|NZ_LS483443.1_287923_288610_+	PRK11595, PRK11595, DNA utilization protein GntX; Provisional	NA|195aa|down_6|NZ_LS483443.1_288719_289304_+	PRK11190, PRK11190, iron-sulfur cluster biogenesis protein NfuA	NA|433aa|down_7|NZ_LS483443.1_289353_290652_-	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein	NA|545aa|down_8|NZ_LS483443.1_290881_292516_+	PRK05380, pyrG, CTP synthetase; Validated	NA|221aa|down_9|NZ_LS483443.1_292818_293481_+	PRK03512, PRK03512, thiamine phosphate synthase
GCF_900476035.1_53694_C01	NZ_LS483443	Aggregatibacter segnis ATCC 33393 strain NCTC 10977 chromosome 1	3	1718980-1719099	4	CRISPRCasFinder	no		cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,cas1,cas3,DEDDh,DinG,csa3	Orphan	GGTACATTTTTTGCTACTGGTACTAGGTACATT	33	0	0	NA	NA	NA	1	1	Orphan	cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1,cas2,cas1,cas3,DEDDh,DinG,csa3	NA,NA|99aa|down_1|NZ_LS483443.1_1720188_1720485_-,NA|163aa|down_5|NZ_LS483443.1_1723009_1723498_+,NA|175aa|down_6|NZ_LS483443.1_1723857_1724382_-,NA|156aa|down_7|NZ_LS483443.1_1724887_1725355_+,NA|111aa|down_8|NZ_LS483443.1_1725973_1726306_-,NA|92aa|down_9|NZ_LS483443.1_1726752_1727028_+	NA|117aa|up_9|NZ_LS483443.1_1713717_1714068_-	pfam01844, HNH, HNH endonuclease	NA|119aa|up_8|NZ_LS483443.1_1714317_1714674_-	pfam10828, DUF2570, Protein of unknown function (DUF2570)	NA|192aa|up_7|NZ_LS483443.1_1714649_1715225_-	cd16901, lyz_P1, P1 lysozyme Lyz-like proteins	NA|76aa|up_6|NZ_LS483443.1_1715208_1715436_-	pfam16080, Phage_holin_2_3, Bacteriophage holin family HP1	NA|169aa|up_5|NZ_LS483443.1_1715595_1716102_-	pfam06530, Phage_antitermQ, Phage antitermination protein Q	NA|121aa|up_4|NZ_LS483443.1_1716094_1716457_-	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed	NA|98aa|up_3|NZ_LS483443.1_1716453_1716747_-	pfam07102, DUF1364, Protein of unknown function (DUF1364)	NA|212aa|up_2|NZ_LS483443.1_1716816_1717452_-	pfam07105, DUF1367, Protein of unknown function (DUF1367)	NA|173aa|up_1|NZ_LS483443.1_1717421_1717940_-	pfam05869, Dam, DNA N-6-adenine-methyltransferase (Dam)	NA|225aa|up_0|NZ_LS483443.1_1717936_1718611_-	pfam06992, Phage_lambda_P, Replication protein P	NA|255aa|down_0|NZ_LS483443.1_1719380_1720145_-	pfam04383, KilA-N, KilA-N domain	NA|99aa|down_1|NZ_LS483443.1_1720188_1720485_-	NA	NA|67aa|down_2|NZ_LS483443.1_1720505_1720706_-	COG4197, COG4197, Uncharacterized protein conserved in bacteria, prophage-related [Function unknown]	NA|351aa|down_3|NZ_LS483443.1_1721564_1722617_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|123aa|down_4|NZ_LS483443.1_1722609_1722978_+	pfam14213, DUF4325, STAS-like domain of unknown function (DUF4325)	NA|163aa|down_5|NZ_LS483443.1_1723009_1723498_+	NA	NA|175aa|down_6|NZ_LS483443.1_1723857_1724382_-	NA	NA|156aa|down_7|NZ_LS483443.1_1724887_1725355_+	NA	NA|111aa|down_8|NZ_LS483443.1_1725973_1726306_-	NA	NA|92aa|down_9|NZ_LS483443.1_1726752_1727028_+	NA
