assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900475995.1_47555_F02	NZ_LS483438	Haemophilus influenzae strain NCTC12975 chromosome 1	1	1101439-1101587	1	CRISPRCasFinder	no	DEDDh	cas3,DinG,DEDDh,WYL	Unclear	TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	49	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,WYL	NA,NA	NA|246aa|up_9|NZ_LS483438.1_1088912_1089650_+	cd10800, LamB_YcsF_YbgL_like, Escherichia coli putative lactam utilization protein YbgL and similar proteins	NA|398aa|up_8|NZ_LS483438.1_1089693_1090887_+	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]	NA|445aa|up_7|NZ_LS483438.1_1090957_1092292_-	PRK05370, PRK05370, argininosuccinate synthase; Validated	NA|291aa|up_6|NZ_LS483438.1_1092447_1093320_-	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|783aa|up_5|NZ_LS483438.1_1093485_1095834_-	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B	NA|118aa|up_4|NZ_LS483438.1_1095840_1096194_-	COG3112, COG3112, Uncharacterized protein conserved in bacteria [Function unknown]	NA|115aa|up_3|NZ_LS483438.1_1096195_1096540_-	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional	NA|269aa|up_2|NZ_LS483438.1_1096676_1097483_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|864aa|up_1|NZ_LS483438.1_1097575_1100167_+	PRK01759, glnD, bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA|356aa|up_0|NZ_LS483438.1_1100241_1101309_+	TIGR02380, ECA_wecA, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase	DEDDh|183aa|down_0|NZ_LS483438.1_1101708_1102257_-	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|347aa|down_1|NZ_LS483438.1_1102327_1103368_+	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA	NA|86aa|down_2|NZ_LS483438.1_1103526_1103784_+	PRK10850, PRK10850, phosphocarrier protein Hpr	NA|576aa|down_3|NZ_LS483438.1_1103863_1105591_+	PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase PtsI	NA|167aa|down_4|NZ_LS483438.1_1105650_1106151_+	PRK09439, PRK09439, PTS system glucose-specific transporter subunit; Provisional	NA|71aa|down_5|NZ_LS483438.1_1106333_1106546_+	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|122aa|down_6|NZ_LS483438.1_1106660_1107026_+	TIGR00156, Uncharacterized_protein_HI_1709, TIGR00156 family protein	NA|222aa|down_7|NZ_LS483438.1_1107090_1107756_+	PRK10336, PRK10336, two-component system response regulator QseB	NA|452aa|down_8|NZ_LS483438.1_1107752_1109108_+	PRK10337, PRK10337, sensor protein QseC; Provisional	NA|676aa|down_9|NZ_LS483438.1_1109384_1111412_+	COG1292, BetT, Choline-glycine betaine transporter [Cell envelope biogenesis, outer membrane]
GCF_900475995.1_47555_F02	NZ_LS483438	Haemophilus influenzae strain NCTC12975 chromosome 1	2	1130294-1130381	2	CRISPRCasFinder	no		cas3,DinG,DEDDh,WYL	Orphan	ACCTTCCCCCGCAAGCAAGGGAAGG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,WYL	NA,NA	NA|354aa|up_9|NZ_LS483438.1_1120889_1121951_+	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins	NA|258aa|up_8|NZ_LS483438.1_1121962_1122736_+	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane]	NA|295aa|up_7|NZ_LS483438.1_1122747_1123632_+	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|268aa|up_6|NZ_LS483438.1_1123633_1124437_+	cd04195, GT2_AmsE_like, GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	NA|256aa|up_5|NZ_LS483438.1_1124546_1125314_-	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional	NA|255aa|up_4|NZ_LS483438.1_1125451_1126216_+	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|243aa|up_3|NZ_LS483438.1_1126350_1127079_+	PRK09421, modB, molybdate ABC transporter permease subunit	NA|352aa|up_2|NZ_LS483438.1_1127065_1128121_+	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|458aa|up_1|NZ_LS483438.1_1128144_1129518_-	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain	NA|212aa|up_0|NZ_LS483438.1_1129576_1130212_-	PRK10702, PRK10702, endonuclease III; Provisional	NA|236aa|down_0|NZ_LS483438.1_1130396_1131104_-	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional	NA|208aa|down_1|NZ_LS483438.1_1131105_1131729_-	PRK01908, PRK01908, electron transport complex protein RnfG; Validated	NA|359aa|down_2|NZ_LS483438.1_1131728_1132805_-	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed	NA|194aa|down_3|NZ_LS483438.1_1134764_1135346_-	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional	NA|193aa|down_4|NZ_LS483438.1_1135433_1136012_-	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional	NA|354aa|down_5|NZ_LS483438.1_1136294_1137356_-	PRK11778, PRK11778, putative inner membrane peptidase; Provisional	NA|222aa|down_6|NZ_LS483438.1_1137555_1138221_+	PRK01904, PRK01904, DUF2057 domain-containing protein	NA|712aa|down_7|NZ_LS483438.1_1138288_1140424_+	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein	NA|651aa|down_8|NZ_LS483438.1_1140521_1142474_-	pfam18254, HMw1_D2, HMW1 domain 2	NA|546aa|down_9|NZ_LS483438.1_1142757_1144395_-	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]
GCF_900475995.1_47555_F02	NZ_LS483438	Haemophilus influenzae strain NCTC12975 chromosome 1	3	1198953-1199047	3	CRISPRCasFinder	no		cas3,DinG,DEDDh,WYL	Orphan	CAGGAGCTGCTGCCTGTGGTGCT	23	1	1	1198976-1199024	NZ_LS483438.1_1198940-1198988	NA	1	1	Orphan	cas3,DinG,DEDDh,WYL	NA,NA|267aa|down_7|NZ_LS483438.1_1210232_1211033_+	NA|98aa|up_9|NZ_LS483438.1_1188188_1188482_+	COG3771, COG3771, Predicted membrane protein [Function unknown]	NA|397aa|up_8|NZ_LS483438.1_1188481_1189672_+	COG2956, COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism]	NA|231aa|up_7|NZ_LS483438.1_1189695_1190388_+	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	NA|107aa|up_6|NZ_LS483438.1_1190394_1190715_+	PRK09019, PRK09019, stress response translation initiation inhibitor YciH	NA|232aa|up_5|NZ_LS483438.1_1190744_1191440_-	PRK06893, PRK06893, DnaA regulatory inactivator Hda	NA|415aa|up_4|NZ_LS483438.1_1191505_1192750_-	TIGR00801, Uric_acid_permease, uracil-xanthine permease	NA|209aa|up_3|NZ_LS483438.1_1192853_1193480_-	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|689aa|up_2|NZ_LS483438.1_1193619_1195686_-	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|181aa|up_1|NZ_LS483438.1_1195697_1196240_-	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|475aa|up_0|NZ_LS483438.1_1196398_1197823_-	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|887aa|down_0|NZ_LS483438.1_1199696_1202357_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|153aa|down_1|NZ_LS483438.1_1202656_1203115_+	PRK05234, mgsA, methylglyoxal synthase; Validated	NA|481aa|down_2|NZ_LS483438.1_1203271_1204714_-	COG5339, COG5339, Uncharacterized protein conserved in bacteria [Function unknown]	NA|636aa|down_3|NZ_LS483438.1_1204980_1206888_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|382aa|down_4|NZ_LS483438.1_1206974_1208120_+	PRK10767, PRK10767, chaperone protein DnaJ; Provisional	NA|418aa|down_5|NZ_LS483438.1_1208198_1209452_-	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|221aa|down_6|NZ_LS483438.1_1209472_1210135_-	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|267aa|down_7|NZ_LS483438.1_1210232_1211033_+	NA	NA|399aa|down_8|NZ_LS483438.1_1211064_1212261_-	PRK11102, PRK11102, Bcr/CflA family multidrug efflux MFS transporter	NA|233aa|down_9|NZ_LS483438.1_1212262_1212961_-	PRK10839, PRK10839, 16S rRNA pseudouridine(516) synthase RsuA
