The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483425	Streptococcus pyogenes strain NCTC13737 chromosome 1	1819726	36610	48923	1819726		Synechococcus_phage(28.57%)	8	NA	NA
WP_111703936.1|36610_40336_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.3	1.9e-38
WP_111703937.1|40496_41951_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.3	4.9e-54
WP_014407190.1|41978_43001_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	41.1	1.2e-62
WP_002986700.1|43168_43723_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	2.4e-25
WP_002987711.1|43906_45454_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	52.4	3.4e-45
WP_010921776.1|45511_46636_-	SH3 domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
WP_111703938.1|46888_48154_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_111703939.1|48431_48923_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	2.5e-18
>prophage 2
NZ_LS483425	Streptococcus pyogenes strain NCTC13737 chromosome 1	1819726	756210	776064	1819726	integrase	Streptococcus_phage(94.74%)	22	739137:739151	775769:775783
739137:739151	attL	TAAAAGAAAAAATAA	NA	NA	NA	NA
WP_000420682.1|756210_756525_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|756540_756927_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|756955_758341_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|758343_758496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|758518_759724_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|759766_759988_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|760104_760602_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|760576_761083_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|761066_763514_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_111704151.1|763516_765694_+	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	96.1	0.0e+00
WP_000769868.1|765690_766692_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224319.1|766688_767621_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_001791010.1|767865_767982_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_057498847.1|767997_769917_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	98.9	0.0e+00
WP_161548555.1|770035_770203_+	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	66.0	4.7e-14
WP_057498846.1|770374_771748_+	tetracycline efflux MFS transporter Tet(L)	NA	NA	NA	NA	NA
WP_002387934.1|772062_772332_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-24
WP_000804885.1|772836_773259_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|773255_773486_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|773946_774150_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|774231_775449_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_078136843.1|775608_776064_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	40.0	4.0e-23
775769:775783	attR	TAAAAGAAAAAATAA	NA	NA	NA	NA
>prophage 3
NZ_LS483425	Streptococcus pyogenes strain NCTC13737 chromosome 1	1819726	1170562	1181165	1819726		Streptococcus_phage(57.14%)	9	NA	NA
WP_011184383.1|1170562_1171705_-	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	27.3	1.4e-24
WP_111704251.1|1171939_1172380_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111704252.1|1172409_1173678_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_111704253.1|1173765_1175118_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.2	9.2e-31
WP_002990260.1|1175338_1175680_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	41.1	2.6e-19
WP_111704254.1|1175740_1176907_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.5	5.8e-34
WP_002985140.1|1177000_1177687_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
WP_002985142.1|1177683_1178847_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
WP_101248340.1|1178954_1181165_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	69.1	5.0e-268
>prophage 4
NZ_LS483425	Streptococcus pyogenes strain NCTC13737 chromosome 1	1819726	1363990	1370640	1819726	portal	Streptococcus_phage(66.67%)	11	NA	NA
WP_010922009.1|1363990_1364815_-	asparagine ligase A	NA	M1PB22	Moumouvirus	33.1	6.2e-22
WP_023078733.1|1364838_1365177_-	Fic family protein	NA	NA	NA	NA	NA
WP_011285436.1|1365593_1365908_-	hypothetical protein	NA	Q6DMT0	Streptococcus_phage	64.5	4.9e-20
WP_111704290.1|1365973_1366426_-|portal	phage portal protein	portal	E4ZFM3	Streptococcus_phage	84.2	6.3e-61
WP_111704291.1|1366530_1366803_-	hypothetical protein	NA	E4ZFM1	Streptococcus_phage	45.2	3.8e-05
WP_002985606.1|1366821_1367127_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_011054283.1|1367126_1367429_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_011054282.1|1367483_1367660_-	hypothetical protein	NA	M1PSF2	Streptococcus_phage	89.7	1.3e-22
WP_001176803.1|1368568_1368793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002990647.1|1369967_1370441_+	DUF2326 domain-containing protein	NA	NA	NA	NA	NA
WP_011184301.1|1370430_1370640_+	helix-turn-helix domain-containing protein	NA	A0A2K5B263	Erysipelothrix_phage	60.0	8.3e-16
>prophage 5
NZ_LS483425	Streptococcus pyogenes strain NCTC13737 chromosome 1	1819726	1422498	1482798	1819726	protease,bacteriocin,tRNA	Streptococcus_phage(33.33%)	60	NA	NA
WP_003060803.1|1422498_1422699_-|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_002992018.1|1422711_1422939_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002987564.1|1424157_1424340_-|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_002994504.1|1424354_1424600_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_093974809.1|1425556_1426033_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_002985743.1|1426052_1426949_-	GTPase Era	NA	NA	NA	NA	NA
WP_002985746.1|1427068_1427476_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_111704306.1|1427456_1427954_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_009880369.1|1428112_1428688_-	uracil-DNA glycosylase family protein	NA	NA	NA	NA	NA
WP_010921967.1|1428733_1429786_-	PhoH family protein	NA	W8D063	Erwinia_phage	50.0	1.2e-46
WP_111704307.1|1429944_1431717_-	oleate hydratase	NA	NA	NA	NA	NA
WP_111704308.1|1432030_1433188_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0E3XB61	Gordonia_phage	40.5	9.3e-16
WP_002985757.1|1433343_1433559_-	YozE family protein	NA	NA	NA	NA	NA
WP_111704309.1|1433555_1434065_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_011284569.1|1434137_1434995_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002985763.1|1435103_1435661_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_002985765.1|1435689_1436418_-	UMP kinase	NA	NA	NA	NA	NA
WP_002985768.1|1436740_1437430_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_002990800.1|1437535_1437961_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_010921962.1|1438204_1438558_+	DUF3397 domain-containing protein	NA	NA	NA	NA	NA
WP_111704310.1|1438627_1441033_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	51.7	3.8e-88
WP_002990808.1|1441249_1442056_+	peptidylprolyl isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	36.6	1.5e-20
WP_011017448.1|1442203_1443058_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_021299377.1|1443058_1443784_-	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	32.6	1.1e-17
WP_004218965.1|1443847_1444780_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023610043.1|1444925_1445573_+	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_111704311.1|1445671_1446013_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111704312.1|1446164_1446860_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_002993069.1|1446879_1447131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111704313.1|1447130_1447685_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_111704314.1|1447715_1449098_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L4K9	Tupanvirus	36.0	8.5e-32
WP_063632606.1|1449270_1450608_-	MFS transporter	NA	NA	NA	NA	NA
WP_111704315.1|1450940_1451900_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_111704316.1|1451967_1452666_-	3-oxoacyl-ACP reductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	24.2	2.7e-10
WP_002990844.1|1452658_1452895_-	DUF2829 domain-containing protein	NA	NA	NA	NA	NA
WP_002995935.1|1453984_1454236_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111704317.1|1454479_1454932_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111704318.1|1457075_1457534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111704319.1|1458027_1458504_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172453735.1|1458928_1459249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111704321.1|1459708_1460461_+	ADP-ribosyltransferase	NA	NA	NA	NA	NA
WP_011054229.1|1460666_1462847_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	43.2	1.2e-170
WP_111704322.1|1462813_1463302_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	R4JF54	Bacillus_phage	37.5	7.6e-12
WP_010921941.1|1463305_1464319_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	53.7	2.5e-97
WP_111704323.1|1464816_1466817_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	35.1	4.6e-87
WP_111704443.1|1467056_1467764_-	DUF1275 domain-containing protein	NA	NA	NA	NA	NA
WP_172453736.1|1467865_1468141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111704324.1|1468535_1473479_-|protease	CXC chemokine-degrading serine protease SpyCEP	protease	NA	NA	NA	NA
WP_012560476.1|1473744_1474926_-	L-lactate oxidase	NA	NA	NA	NA	NA
WP_111704325.1|1475159_1475987_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.5	4.9e-128
WP_011284536.1|1476060_1476417_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.8	6.3e-40
WP_009880724.1|1476715_1477345_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_002985833.1|1477391_1477784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002985836.1|1477810_1478674_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.0	1.7e-115
WP_002985838.1|1478678_1479002_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
WP_023610359.1|1479405_1479645_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109828778.1|1479663_1480539_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	44.8	3.7e-65
WP_010921930.1|1480556_1481192_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	63.4	1.2e-65
WP_002985847.1|1481440_1481716_-	YlbG family protein	NA	NA	NA	NA	NA
WP_002985850.1|1482207_1482798_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	55.7	2.6e-54
>prophage 6
NZ_LS483425	Streptococcus pyogenes strain NCTC13737 chromosome 1	1819726	1744960	1762672	1819726	integrase	Streptococcus_phage(41.67%)	20	1748159:1748179	1759973:1759993
WP_032461237.1|1744960_1746181_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	24.3	2.7e-05
WP_111704448.1|1746191_1748174_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.4	3.9e-62
1748159:1748179	attL	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
WP_111704407.1|1748268_1749414_-|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	45.1	9.3e-85
WP_011889222.1|1749750_1750740_-	DUF3644 domain-containing protein	NA	A0A0N9RUA4	Staphylococcus_phage	47.0	2.8e-77
WP_037581246.1|1750766_1751042_-	helix-turn-helix domain-containing protein	NA	O48392	Streptococcus_phage	44.6	6.4e-16
WP_111704408.1|1751392_1752349_-	helix-turn-helix transcriptional regulator	NA	E8ZDI9	Streptococcus_phage	37.8	2.1e-13
WP_111704449.1|1752380_1752542_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_168388563.1|1752848_1753022_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_000916926.1|1753165_1753618_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111704410.1|1753707_1754040_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111704450.1|1754039_1754231_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111704411.1|1754242_1754605_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003045763.1|1754601_1754931_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111704412.1|1754933_1755206_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	57.5	2.6e-17
WP_111704413.1|1755206_1756073_+	primase C-terminal domain-containing protein	NA	A0A1X9I6L2	Streptococcus_phage	73.7	2.7e-121
WP_011889230.1|1756092_1757595_+	DNA primase	NA	Q9AZI5	Lactococcus_phage	37.5	7.0e-64
WP_002992136.1|1758149_1758512_+	DUF1492 domain-containing protein	NA	A0A2H4JFS1	uncultured_Caudovirales_phage	29.9	8.7e-05
WP_111677542.1|1758486_1758870_+	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	41.7	3.7e-14
WP_111704414.1|1759071_1759719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111704415.1|1760116_1762672_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.8	5.2e-43
1759973:1759993	attR	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
