assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900475795.1_46514_A02	NZ_LS483415	Streptococcus pyogenes strain NCTC8304 chromosome 1	1	779647-780012	1,1	CRT,PILER-CR	no		cas3,csm6,DEDDh,csa3	Orphan	GTTTTAGAGCTATGNTGTTTTGAATGGTCCCAAAAC,GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	36,36	1	2	779683-779712|779683-779712	NZ_LS483415.1_975305-975276|NZ_LS483415.1_1331436-1331407	II-A:II-A	5,3	5	Orphan	cas3,csm6,DEDDh,csa3	NA|214aa|up_4|NZ_LS483415.1_775501_776143_+,NA	NA|264aa|up_9|NZ_LS483415.1_769928_770720_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|448aa|up_8|NZ_LS483415.1_770719_772063_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|284aa|up_7|NZ_LS483415.1_772164_773016_+	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|319aa|up_6|NZ_LS483415.1_773012_773969_+	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|452aa|up_5|NZ_LS483415.1_774022_775378_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|214aa|up_4|NZ_LS483415.1_775501_776143_+	NA	NA|377aa|up_3|NZ_LS483415.1_776205_777336_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|251aa|up_2|NZ_LS483415.1_777345_778098_+	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|255aa|up_1|NZ_LS483415.1_778097_778862_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|211aa|up_0|NZ_LS483415.1_778861_779494_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|611aa|down_0|NZ_LS483415.1_780654_782487_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|146aa|down_1|NZ_LS483415.1_783732_784170_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|340aa|down_2|NZ_LS483415.1_784299_785319_+	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|142aa|down_3|NZ_LS483415.1_785525_785951_+	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|164aa|down_4|NZ_LS483415.1_785969_786461_+	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|270aa|down_5|NZ_LS483415.1_786477_787287_+	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]	NA|276aa|down_6|NZ_LS483415.1_787283_788111_+	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism]	NA|550aa|down_7|NZ_LS483415.1_788246_789896_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|263aa|down_8|NZ_LS483415.1_789899_790688_+	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|349aa|down_9|NZ_LS483415.1_790681_791728_+	cd13546, PBP2_BitB, Substrate binding domain of a putative iron transporter BitB, a member of the type 2 periplasmic binding fold superfamily
GCF_900475795.1_46514_A02	NZ_LS483415	Streptococcus pyogenes strain NCTC8304 chromosome 1	2	1056831-1056938	1	CRISPRCasFinder	no		cas3,csm6,DEDDh,csa3	Orphan	AGGCGTCACTAGCAGCGTTATCTG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csm6,DEDDh,csa3	NA,NA	NA|134aa|up_9|NZ_LS483415.1_1045201_1045603_-	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|205aa|up_8|NZ_LS483415.1_1045687_1046302_-	cd09007, NP-I_spr0068, uncharacterized subfamily of the nucleoside phosphorylase-I family	NA|463aa|up_7|NZ_LS483415.1_1046411_1047800_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|484aa|up_6|NZ_LS483415.1_1047848_1049300_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|164aa|up_5|NZ_LS483415.1_1049507_1049999_-	PRK00131, aroK, shikimate kinase; Reviewed	NA|428aa|up_4|NZ_LS483415.1_1049991_1051275_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|322aa|up_3|NZ_LS483415.1_1051385_1052351_-	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|287aa|up_2|NZ_LS483415.1_1052352_1053213_-	PRK07281, PRK07281, methionyl aminopeptidase	NA|428aa|up_1|NZ_LS483415.1_1053228_1054512_-	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]	NA|181aa|up_0|NZ_LS483415.1_1054520_1055063_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|420aa|down_0|NZ_LS483415.1_1057589_1058849_-	PRK12830, PRK12830, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed	NA|399aa|down_1|NZ_LS483415.1_1059022_1060219_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|793aa|down_2|NZ_LS483415.1_1060755_1063134_-	COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown]	NA|314aa|down_3|NZ_LS483415.1_1063336_1064278_+	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA|68aa|down_4|NZ_LS483415.1_1064252_1064456_-	pfam11676, DUF3272, Protein of unknown function (DUF3272)	NA|557aa|down_5|NZ_LS483415.1_1064550_1066221_-	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated	NA|166aa|down_6|NZ_LS483415.1_1066220_1066718_-	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|270aa|down_7|NZ_LS483415.1_1066862_1067672_+	COG2339, prsW, Membrane proteinase, regulator of anti-sigma factor [Posttranslational modification, protein turnover, chaperones]	NA|88aa|down_8|NZ_LS483415.1_1067724_1067988_-	COG3326, COG3326, Predicted membrane protein [Function unknown]	NA|209aa|down_9|NZ_LS483415.1_1068067_1068694_-	PRK05480, PRK05480, uridine/cytidine kinase; Provisional
