The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483411	Haemophilus influenzae strain NCTC11426 chromosome 1	1834484	1022279	1096029	1834484	head,protease,tail,capsid,lysis,portal	Mannheimia_phage(17.65%)	52	NA	NA
WP_110430592.1|1022279_1022795_-|protease	SprT family zinc-dependent metalloprotease	protease	NA	NA	NA	NA
WP_005630438.1|1023088_1024243_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	62.7	1.2e-127
WP_050848776.1|1024754_1025219_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_172453995.1|1025236_1026022_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_111695486.1|1026058_1027858_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	26.0	7.4e-44
WP_014326504.1|1028050_1029070_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_111695487.1|1029320_1029947_+	guanylate kinase	NA	K4JYM5	Abalone_herpesvirus	35.6	7.5e-20
WP_111695488.1|1030009_1030276_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_111695489.1|1030819_1032934_+	bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	38.8	2.5e-11
WP_111695490.1|1032930_1035012_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_111695491.1|1035042_1035852_+	glutamate racemase	NA	NA	NA	NA	NA
WP_021035422.1|1036062_1037208_+	FMN-dependent L-lactate dehydrogenase LldD	NA	NA	NA	NA	NA
WP_111695492.1|1043313_1043541_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041175358.1|1043550_1044063_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021035420.1|1044326_1045256_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005670246.1|1045981_1046311_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_005632089.1|1046413_1046647_+	YgjV family protein	NA	NA	NA	NA	NA
WP_021035419.1|1046722_1048303_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	27.3	4.3e-32
WP_005667099.1|1048533_1049322_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_021035418.1|1049401_1051381_+	exoribonuclease II	NA	Q0GXV6	Lactococcus_phage	25.1	1.1e-24
WP_111695493.1|1051807_1059013_+	Hia/Hsf adhesin N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_021035416.1|1059249_1059891_+	5-oxoprolinase subunit PxpB	NA	NA	NA	NA	NA
WP_021035415.1|1059887_1060817_+	5-oxoprolinase/urea amidolyase family protein	NA	NA	NA	NA	NA
WP_021035414.1|1060803_1061541_+	5-oxoprolinase subunit PxpA	NA	NA	NA	NA	NA
WP_111695494.1|1061584_1062778_+	divalent metal cation transporter	NA	NA	NA	NA	NA
WP_021035412.1|1062858_1064193_-	argininosuccinate synthase	NA	A0A140XAJ5	Dickeya_phage	79.4	8.4e-53
WP_021035411.1|1064369_1065242_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	35.7	7.4e-50
WP_050949442.1|1065407_1067756_-	penicillin-binding protein 1B	NA	NA	NA	NA	NA
WP_021035409.1|1067762_1068116_-	YacL family protein	NA	NA	NA	NA	NA
WP_021035408.1|1068117_1068462_-	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	48.6	1.7e-26
WP_021035407.1|1068598_1069405_+	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_021035406.1|1069497_1072089_+	bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA	NA	NA	NA	NA
WP_111695495.1|1072878_1073946_+	UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA	NA	NA	NA	NA
WP_021035403.1|1074242_1074791_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	40.7	1.6e-29
WP_021035402.1|1074861_1075902_+	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA	NA
WP_005654341.1|1076060_1076318_+	phosphocarrier protein Hpr	NA	NA	NA	NA	NA
WP_011272760.1|1076397_1078125_+	phosphoenolpyruvate-protein phosphotransferase PtsI	NA	NA	NA	NA	NA
WP_005688036.1|1078184_1078685_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_005688034.1|1078822_1078918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005688032.1|1079032_1079398_+	YgiW/YdeI family stress tolerance OB fold protein	NA	A0A1I9LJU6	Stx_converting_phage	34.2	5.9e-09
WP_014550655.1|1079461_1080127_+	response regulator	NA	NA	NA	NA	NA
WP_021035401.1|1080123_1081479_+	two-component system sensor histidine kinase QseC	NA	W8CYF6	Bacillus_phage	26.5	5.4e-15
WP_041175356.1|1081744_1083772_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.8	2.1e-18
WP_021035399.1|1083808_1085284_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	35.7	3.2e-45
WP_005664886.1|1085391_1086495_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_021035398.1|1086491_1087568_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_021035397.1|1087761_1090032_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_021035396.1|1090681_1091692_-|portal	phage portal protein	portal	Q19UT6	Mannheimia_phage	61.5	2.3e-119
WP_111695496.1|1093651_1094458_+|capsid	GPO family capsid scaffolding protein	capsid	A0A0M3LNM2	Mannheimia_phage	58.1	3.3e-60
WP_111695497.1|1095090_1095597_+|head	head completion/stabilization protein	head	A0A0M3LNL8	Mannheimia_phage	51.0	1.1e-32
WP_042603529.1|1095596_1095806_+|tail	tail protein X	tail	NA	NA	NA	NA
WP_048949896.1|1095807_1096029_+|lysis	lysis protein	lysis	NA	NA	NA	NA
>prophage 2
NZ_LS483411	Haemophilus influenzae strain NCTC11426 chromosome 1	1834484	1745409	1766948	1834484	head,protease,plate,tail,terminase,capsid	Haemophilus_phage(60.0%)	22	NA	NA
WP_111695716.1|1745409_1747254_+	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	29.3	4.8e-22
WP_005651690.1|1747331_1747610_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_111695717.1|1748057_1749698_+|terminase	phage terminase large subunit	terminase	B7SDN0	Haemophilus_phage	78.2	8.5e-249
WP_021034885.1|1749778_1751401_+	DUF935 domain-containing protein	NA	B7SDN1	Haemophilus_phage	68.3	7.0e-203
WP_111695718.1|1751384_1752692_+|capsid	minor capsid protein	capsid	A0A0M3LSH7	Mannheimia_phage	67.2	1.6e-160
WP_021034883.1|1752814_1753231_+	phage virion morphogenesis protein	NA	B7SDN8	Haemophilus_phage	66.7	2.1e-47
WP_021034882.1|1753513_1754551_+|protease	phage protease	protease	B7SDN9	Haemophilus_phage	46.7	7.2e-68
WP_021034881.1|1754550_1755474_+|head	Mu-like prophage major head subunit gpT family protein	head	B7SDP1	Haemophilus_phage	75.2	1.4e-134
WP_021034880.1|1755537_1755843_+	hypothetical protein	NA	B7SDP3	Haemophilus_phage	47.0	6.9e-19
WP_021034879.1|1755852_1756284_+	DUF1320 domain-containing protein	NA	B7SDP4	Haemophilus_phage	60.9	1.3e-36
WP_021034878.1|1756267_1756930_+	DUF1834 family protein	NA	A0A0M3LQJ7	Mannheimia_phage	45.0	1.2e-44
WP_041175294.1|1756901_1757084_+	DUF2635 domain-containing protein	NA	A0A0M3LQM9	Mannheimia_phage	63.3	1.0e-09
WP_021034876.1|1757076_1758492_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	B7SDP8	Haemophilus_phage	62.6	1.1e-156
WP_021034875.1|1758501_1758873_+	hypothetical protein	NA	A0A0M3LRV6	Mannheimia_phage	65.0	1.2e-36
WP_021034874.1|1758872_1759214_+	hypothetical protein	NA	A0A0M3LSI2	Mannheimia_phage	50.5	1.8e-20
WP_021034873.1|1759228_1759435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021034870.1|1761762_1763097_+	DNA circularization N-terminal domain-containing protein	NA	F6MIL2	Haemophilus_phage	45.6	6.3e-109
WP_021034869.1|1763086_1764211_+	bacteriophage Mu P family protein	NA	F6MIL3	Haemophilus_phage	72.7	1.4e-146
WP_021034868.1|1764220_1764856_+|plate	phage baseplate assembly protein V	plate	A0A0M3LPA3	Mannheimia_phage	58.3	4.7e-62
WP_041175293.1|1764925_1765276_+	phage GP46 family protein	NA	A0A0M3LQK5	Mannheimia_phage	73.3	1.2e-43
WP_111695719.1|1765290_1766355_+|plate	baseplate J/gp47 family protein	plate	F6MIL6	Haemophilus_phage	67.1	2.6e-129
WP_172454002.1|1766351_1766948_+	DUF2313 domain-containing protein	NA	F6MIL7	Haemophilus_phage	63.0	2.3e-66
>prophage 3
NZ_LS483411	Haemophilus influenzae strain NCTC11426 chromosome 1	1834484	1792311	1800851	1834484		Escherichia_phage(71.43%)	10	NA	NA
WP_021034845.1|1792311_1792965_+	ABC transporter ATP-binding protein	NA	M1HXU1	Acanthocystis_turfacea_Chlorella_virus	25.6	9.3e-05
WP_111695725.1|1793131_1793662_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	59.7	2.6e-45
WP_021034843.1|1793751_1794030_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_005656013.1|1794038_1794401_-	membrane protein	NA	NA	NA	NA	NA
WP_014550950.1|1794375_1795485_-	transglutaminase family protein	NA	NA	NA	NA	NA
WP_111695726.1|1795738_1798159_+	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	50.5	4.8e-224
WP_111695727.1|1798169_1798787_+	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	57.3	3.7e-72
WP_005669794.1|1798788_1799628_+	dimethyl sulfoxide reductase anchor subunit	NA	A0A077SK59	Escherichia_phage	33.2	1.3e-19
WP_005669792.1|1799739_1800351_+	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	32.5	3.0e-21
WP_005669790.1|1800350_1800851_+	ferredoxin-type protein NapF	NA	A0A077SLP0	Escherichia_phage	31.4	9.2e-13
