assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900475185.1_42197_A02	NZ_LS483361	Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179 chromosome 1	1	941882-941974	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,csm6,csn2,cas2,cas9,cas1,cas4,cas7,cas8c,cas5	Orphan	AGTAGACGAGGAGTCTGCTCAAGAGGA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,csm6,csn2,cas2,cas9,cas1,cas4,cas7,cas8c,cas5	NA,NA|57aa|down_5|NZ_LS483361.1_948203_948374_+,NA|248aa|down_8|NZ_LS483361.1_950466_951210_+	NA|675aa|up_9|NZ_LS483361.1_925261_927286_-	cd07412, MPP_YhcR_N, Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain	NA|574aa|up_8|NZ_LS483361.1_927748_929470_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|581aa|up_7|NZ_LS483361.1_929471_931214_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|293aa|up_6|NZ_LS483361.1_931418_932297_+	COG1577, ERG12, Mevalonate kinase [Lipid metabolism]	NA|315aa|up_5|NZ_LS483361.1_932278_933223_+	TIGR01240, Diphosphomevalonate_decarboxylase, diphosphomevalonate decarboxylase	NA|338aa|up_4|NZ_LS483361.1_933215_934229_+	COG1577, ERG12, Mevalonate kinase [Lipid metabolism]	NA|331aa|up_3|NZ_LS483361.1_934215_935208_+	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional	NA|509aa|up_2|NZ_LS483361.1_935353_936880_-	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain	NA|318aa|up_1|NZ_LS483361.1_937160_938114_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|1115aa|up_0|NZ_LS483361.1_938245_941590_+	pfam17961, Big_8, Bacterial Ig domain	NA|515aa|down_0|NZ_LS483361.1_942405_943950_-	pfam05043, Mga, Mga helix-turn-helix domain	NA|426aa|down_1|NZ_LS483361.1_944109_945387_-	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR)	NA|394aa|down_2|NZ_LS483361.1_945367_946549_-	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade	NA|280aa|down_3|NZ_LS483361.1_946766_947606_+	PRK01827, thyA, thymidylate synthase; Reviewed	NA|166aa|down_4|NZ_LS483361.1_947686_948184_+	pfam00186, DHFR_1, Dihydrofolate reductase	NA|57aa|down_5|NZ_LS483361.1_948203_948374_+	NA	NA|410aa|down_6|NZ_LS483361.1_948489_949719_+	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|200aa|down_7|NZ_LS483361.1_949728_950328_+	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|248aa|down_8|NZ_LS483361.1_950466_951210_+	NA	NA|700aa|down_9|NZ_LS483361.1_951266_953366_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]
GCF_900475185.1_42197_A02	NZ_LS483361	Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179 chromosome 1	2	1234708-1235272	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas9	cas3,DEDDh,csa3,DinG,csm6,csn2,cas2,cas9,cas1,cas4,cas7,cas8c,cas5	Type II-A,Type II-B,Type II-C	GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A:II-A:II-A	8,8,7	8	TypeII-A,TypeII-B,TypeII-C	cas3,DEDDh,csa3,DinG,csm6,csn2,cas2,cas9,cas1,cas4,cas7,cas8c,cas5	NA,NA|214aa|down_8|NZ_LS483361.1_1247780_1248422_-	NA|270aa|up_9|NZ_LS483361.1_1225967_1226777_-	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]	NA|164aa|up_8|NZ_LS483361.1_1226792_1227284_-	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|142aa|up_7|NZ_LS483361.1_1227302_1227728_-	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|340aa|up_6|NZ_LS483361.1_1227934_1228954_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|390aa|up_5|NZ_LS483361.1_1229063_1230233_-	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|99aa|up_4|NZ_LS483361.1_1230422_1230719_-	pfam08951, EntA_Immun, Enterocin A Immunity	NA|217aa|up_3|NZ_LS483361.1_1230955_1231606_-	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|146aa|up_2|NZ_LS483361.1_1231618_1232056_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|611aa|up_1|NZ_LS483361.1_1232230_1234063_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|153aa|up_0|NZ_LS483361.1_1234132_1234591_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	csn2|221aa|down_0|NZ_LS483361.1_1235373_1236036_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|114aa|down_1|NZ_LS483361.1_1236025_1236367_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas9|1372aa|down_2|NZ_LS483361.1_1237232_1241348_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|491aa|down_3|NZ_LS483361.1_1242798_1244271_-	COG3666, COG3666, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|210aa|down_4|NZ_LS483361.1_1244432_1245062_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|255aa|down_5|NZ_LS483361.1_1245061_1245826_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|251aa|down_6|NZ_LS483361.1_1245825_1246578_-	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|377aa|down_7|NZ_LS483361.1_1246588_1247719_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|214aa|down_8|NZ_LS483361.1_1247780_1248422_-	NA	NA|452aa|down_9|NZ_LS483361.1_1248544_1249900_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional
GCF_900475185.1_42197_A02	NZ_LS483361	Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179 chromosome 1	3	1565020-1565192	3,2	CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	cas3,DEDDh,csa3,DinG,csm6,csn2,cas2,cas9,cas1,cas4,cas7,cas8c,cas5	Type I-C, Type I-U?,Type I-U	CCTATTTCAATCCACTCACCCGTGAAGGGTGAGAC,AAACCTATTTCAATCCACTCACCCGTGAAGGGTGAGAC	35,38	0	0	NA	NA	I-C:I-C	2,2	2	TypeI-C,TypeI-U?,TypeI-U	cas3,DEDDh,csa3,DinG,csm6,csn2,cas2,cas9,cas1,cas4,cas7,cas8c,cas5	NA,NA	NA|158aa|up_9|NZ_LS483361.1_1555116_1555590_+	COG1438, ArgR, Arginine repressor [Transcription]	NA|239aa|up_8|NZ_LS483361.1_1555752_1556469_-	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|360aa|up_7|NZ_LS483361.1_1556491_1557571_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|578aa|up_6|NZ_LS483361.1_1557643_1559377_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|247aa|up_5|NZ_LS483361.1_1559373_1560114_-	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|369aa|up_4|NZ_LS483361.1_1560201_1561308_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|208aa|up_3|NZ_LS483361.1_1561347_1561971_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|237aa|up_2|NZ_LS483361.1_1561983_1562694_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|311aa|up_1|NZ_LS483361.1_1562913_1563846_-	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|320aa|up_0|NZ_LS483361.1_1563937_1564897_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	cas2|98aa|down_0|NZ_LS483361.1_1565339_1565633_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|342aa|down_1|NZ_LS483361.1_1565643_1566669_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|225aa|down_2|NZ_LS483361.1_1566665_1567340_-	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas7|283aa|down_3|NZ_LS483361.1_1567341_1568190_-	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas8c|631aa|down_4|NZ_LS483361.1_1568194_1570087_-	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|243aa|down_5|NZ_LS483361.1_1570086_1570815_-	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas3|809aa|down_6|NZ_LS483361.1_1570946_1573373_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|883aa|down_7|NZ_LS483361.1_1573640_1576289_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|188aa|down_8|NZ_LS483361.1_1576290_1576854_-	pfam13238, AAA_18, AAA domain	NA|197aa|down_9|NZ_LS483361.1_1576850_1577441_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
