The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483359	Streptococcus pyogenes strain NCTC12068 chromosome 1	1751353	36635	49010	1751353		Synechococcus_phage(28.57%)	8	NA	NA
WP_111717781.1|36635_40361_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.7	6.6e-39
WP_111692955.1|40584_42039_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.1	1.1e-53
WP_020833183.1|42066_43089_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	41.4	3.1e-63
WP_009880321.1|43256_43811_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	5.2e-25
WP_030126532.1|43994_45542_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	52.4	4.4e-45
WP_010921776.1|45598_46723_-	SH3 domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
WP_030126531.1|46975_48241_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_023079042.1|48518_49010_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	43.1	1.4e-18
>prophage 2
NZ_LS483359	Streptococcus pyogenes strain NCTC12068 chromosome 1	1751353	338152	440770	1751353	bacteriocin,protease,tRNA,transposase	Streptococcus_phage(21.43%)	104	NA	NA
WP_014635306.1|338152_338788_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	63.4	2.0e-65
WP_023078966.1|338805_339681_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	48.3	4.8e-73
WP_030126140.1|339699_339939_+	tpl protein	NA	NA	NA	NA	NA
WP_002985838.1|340342_340666_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
WP_021733048.1|340670_341534_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	74.7	3.8e-115
WP_002985833.1|341560_341953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_030126139.1|341999_342629_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_014407341.1|342927_343284_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.0	1.8e-39
WP_002990895.1|343357_344185_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.5	2.9e-128
WP_168388910.1|344418_345600_+	L-lactate oxidase	NA	NA	NA	NA	NA
WP_111717823.1|345865_350809_+|protease	CXC chemokine-degrading serine protease SpyCEP	protease	NA	NA	NA	NA
WP_042765607.1|351581_352289_+	DUF1275 domain-containing protein	NA	NA	NA	NA	NA
WP_111717825.1|352528_354529_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	35.1	1.6e-87
WP_111717827.1|355023_356037_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	54.0	1.4e-97
WP_111717829.1|356040_356529_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	R4JF54	Bacillus_phage	37.5	1.0e-11
WP_111717831.1|356495_358676_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	43.2	1.6e-170
WP_111717833.1|358878_359631_-	ADP-ribosyltransferase	NA	NA	NA	NA	NA
WP_172450295.1|360089_360617_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111717837.1|362555_362936_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111717841.1|364906_365506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111717843.1|365540_365960_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111717845.1|366191_366443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111717847.1|366537_367239_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111717849.1|367917_368238_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063631774.1|368551_369250_-	streptococcal pyrogenic exotoxin SpeJ	NA	NA	NA	NA	NA
WP_021340726.1|369474_369612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111717851.1|369841_370045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111717853.1|370315_370774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111717855.1|371306_371963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002990844.1|372323_372560_+	DUF2829 domain-containing protein	NA	NA	NA	NA	NA
WP_111717857.1|372552_373251_+	3-oxoacyl-ACP reductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	25.6	7.1e-11
WP_111717859.1|373326_374286_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_002985796.1|374618_375956_+	MFS transporter	NA	NA	NA	NA	NA
WP_111717861.1|376129_377512_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L4K9	Tupanvirus	36.0	6.5e-32
WP_011184238.1|377542_378097_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_111717864.1|378096_378348_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111717866.1|378367_379063_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_111717868.1|379213_379555_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111717870.1|379653_380301_-	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_011017446.1|380446_381379_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002985780.1|381442_382168_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	32.6	1.4e-17
WP_063631781.1|382168_383023_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_002985776.1|383170_383977_-	peptidylprolyl isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	36.6	1.5e-20
WP_111717872.1|384193_386599_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	51.7	3.8e-88
WP_010921962.1|386668_387022_-	DUF3397 domain-containing protein	NA	NA	NA	NA	NA
WP_002990800.1|387265_387691_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_002985768.1|387796_388486_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_002985765.1|388807_389536_+	UMP kinase	NA	NA	NA	NA	NA
WP_002985763.1|389564_390122_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_011106872.1|390230_391088_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002990794.1|391160_391670_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_002985757.1|391666_391882_+	YozE family protein	NA	NA	NA	NA	NA
WP_111717874.1|392037_393207_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0E3XB61	Gordonia_phage	40.5	5.5e-16
WP_002990789.1|393521_395294_+	oleate hydratase	NA	NA	NA	NA	NA
WP_002990786.1|395452_396505_+	PhoH family protein	NA	W8D063	Erwinia_phage	50.0	1.2e-46
WP_002990783.1|396550_397126_+	uracil-DNA glycosylase family protein	NA	NA	NA	NA	NA
WP_002985748.1|397284_397782_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_002985746.1|397762_398170_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_002985743.1|398289_399186_+	GTPase Era	NA	NA	NA	NA	NA
WP_111717876.1|399206_399683_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_014635333.1|400834_401281_-	ATP-binding cassette domain-containing protein	NA	F2Y302	Organic_Lake_phycodnavirus	36.0	4.1e-12
WP_011528336.1|401503_402214_-|bacteriocin	bacteriocin ABC transporter	bacteriocin	NA	NA	NA	NA
WP_002994577.1|402318_402555_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_002994580.1|402852_403077_+|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002994581.1|403054_403231_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072135613.1|403474_403837_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_028797129.1|404447_404675_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002994587.1|404723_405041_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020833317.1|405106_405388_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_009880536.1|405530_405716_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_136274792.1|405818_406244_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	46.3	3.0e-28
WP_030126108.1|408187_408937_+	response regulator transcription factor	NA	A0A1V0E029	Clostridioides_phage	27.5	3.1e-20
WP_030126107.1|408937_410272_+	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_011017462.1|410419_410545_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_014635340.1|410621_411986_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_020833322.1|411996_414150_-	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.3	5.7e-43
WP_030126106.1|414432_414657_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_030126105.1|414733_414952_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_023605036.1|415477_415879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_030126103.1|416129_417200_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082243200.1|417244_417676_+	histidine kinase	NA	NA	NA	NA	NA
WP_023605037.1|418023_418293_-	quorum-sensing system protein StcA	NA	NA	NA	NA	NA
WP_128650799.1|419206_419275_-	peptide pheromone SHP2	NA	NA	NA	NA	NA
WP_002990747.1|419363_420230_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002990742.1|420401_421229_+	DNA-formamidopyrimidine glycosylase	NA	A0A127AWE5	Bacillus_phage	27.5	5.1e-16
WP_011017469.1|421225_421819_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_030126101.1|422008_423511_+	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	41.3	8.8e-75
WP_030126100.1|423632_424826_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_002990729.1|424822_424969_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002985700.1|425014_425251_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_030126099.1|425344_427678_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.6	2.6e-89
WP_011528358.1|427680_428148_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	57.0	7.5e-41
WP_010921981.1|428153_428873_+	glutaminyl-peptide cyclotransferase	NA	NA	NA	NA	NA
WP_111717878.1|428989_429637_-	pyroglutamyl-peptidase I	NA	NA	NA	NA	NA
WP_020904972.1|429686_430613_-	DUF979 family protein	NA	NA	NA	NA	NA
WP_011017476.1|430612_431296_-	DUF969 domain-containing protein	NA	NA	NA	NA	NA
WP_002990711.1|431506_432433_-	glycosyltransferase family 2 protein	NA	V5USA4	Oenococcus_phage	47.5	1.5e-77
WP_111717880.1|432577_432955_-	VOC family protein	NA	NA	NA	NA	NA
WP_002985684.1|432965_433631_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_111717881.1|433679_434765_-	aminopeptidase P family protein	NA	NA	NA	NA	NA
WP_002985680.1|434938_435940_+	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	28.5	6.1e-24
WP_111717883.1|436070_437069_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_002994187.1|437070_438405_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_002985672.1|438826_440770_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	38.7	1.0e-120
>prophage 3
NZ_LS483359	Streptococcus pyogenes strain NCTC12068 chromosome 1	1751353	643874	654476	1751353		Streptococcus_phage(57.14%)	9	NA	NA
WP_030126017.1|643874_646085_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	68.9	1.1e-267
WP_002985142.1|646192_647356_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
WP_002985140.1|647352_648039_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
WP_111717928.1|648131_649298_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
WP_002985134.1|649358_649700_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	40.2	5.9e-19
WP_030126015.1|649920_651273_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.2	2.7e-30
WP_030126014.1|651360_652629_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_012560601.1|652658_653099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011184383.1|653333_654476_+	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	27.3	1.4e-24
