assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900474915.1_41851_G01	NZ_LS483333	Streptococcus pyogenes strain NCTC12048 chromosome 1	1	756253-756374	1	CRISPRCasFinder	no		cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,csa3	Orphan	GCGGATCAAGCAGACGCTTTACAATCAGAAGAAGCTGC	38	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,csa3	NA,NA	NA|209aa|up_9|NZ_LS483333.1_744722_745349_+	PRK05480, PRK05480, uridine/cytidine kinase; Provisional	NA|88aa|up_8|NZ_LS483333.1_745428_745692_+	COG3326, COG3326, Predicted membrane protein [Function unknown]	NA|270aa|up_7|NZ_LS483333.1_745744_746554_-	COG2339, prsW, Membrane proteinase, regulator of anti-sigma factor [Posttranslational modification, protein turnover, chaperones]	NA|166aa|up_6|NZ_LS483333.1_746698_747196_+	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|557aa|up_5|NZ_LS483333.1_747195_748866_+	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated	NA|68aa|up_4|NZ_LS483333.1_748960_749164_+	pfam11676, DUF3272, Protein of unknown function (DUF3272)	NA|314aa|up_3|NZ_LS483333.1_749138_750080_-	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA|717aa|up_2|NZ_LS483333.1_750282_752433_+	COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown]	NA|399aa|up_1|NZ_LS483333.1_752971_754168_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|420aa|up_0|NZ_LS483333.1_754341_755601_+	PRK12830, PRK12830, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed	NA|181aa|down_0|NZ_LS483333.1_756849_757392_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|428aa|down_1|NZ_LS483333.1_757400_758684_+	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]	NA|287aa|down_2|NZ_LS483333.1_758699_759560_+	PRK07281, PRK07281, methionyl aminopeptidase	NA|322aa|down_3|NZ_LS483333.1_759561_760527_+	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|428aa|down_4|NZ_LS483333.1_760637_761921_+	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|164aa|down_5|NZ_LS483333.1_761913_762405_+	PRK00131, aroK, shikimate kinase; Reviewed	NA|484aa|down_6|NZ_LS483333.1_762612_764064_+	COG1316, LytR, Transcriptional regulator [Transcription]	NA|463aa|down_7|NZ_LS483333.1_764112_765501_+	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|134aa|down_8|NZ_LS483333.1_766407_766809_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|495aa|down_9|NZ_LS483333.1_766913_768398_-	PRK13663, PRK13663, hypothetical protein; Provisional
GCF_900474915.1_41851_G01	NZ_LS483333	Streptococcus pyogenes strain NCTC12048 chromosome 1	2	1007955-1008650	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,csa3	Type II-B,Type II-C,Type II-A	GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A:II-A:II-A	10,10,9	10	TypeII-B,TypeII-C,TypeII-A	cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,csa3	NA,NA|214aa|down_8|NZ_LS483333.1_1018546_1019188_-	NA|263aa|up_9|NZ_LS483333.1_996985_997774_-	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|550aa|up_8|NZ_LS483333.1_997777_999427_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|276aa|up_7|NZ_LS483333.1_999562_1000390_-	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism]	NA|270aa|up_6|NZ_LS483333.1_1000386_1001196_-	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]	NA|164aa|up_5|NZ_LS483333.1_1001212_1001704_-	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|142aa|up_4|NZ_LS483333.1_1001730_1002156_-	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|340aa|up_3|NZ_LS483333.1_1002362_1003382_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|146aa|up_2|NZ_LS483333.1_1003511_1003949_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|386aa|up_1|NZ_LS483333.1_1004134_1005292_-	PHA03169, PHA03169, hypothetical protein; Provisional	NA|611aa|up_0|NZ_LS483333.1_1005479_1007312_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	csn2|221aa|down_0|NZ_LS483333.1_1008752_1009415_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|114aa|down_1|NZ_LS483333.1_1009404_1009746_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|290aa|down_2|NZ_LS483333.1_1009742_1010612_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1368aa|down_3|NZ_LS483333.1_1010611_1014715_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|211aa|down_4|NZ_LS483333.1_1015195_1015828_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|255aa|down_5|NZ_LS483333.1_1015827_1016592_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|251aa|down_6|NZ_LS483333.1_1016591_1017344_-	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|377aa|down_7|NZ_LS483333.1_1017353_1018484_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|214aa|down_8|NZ_LS483333.1_1018546_1019188_-	NA	NA|452aa|down_9|NZ_LS483333.1_1019311_1020667_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional
