The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483313	Staphylococcus simulans strain NCTC11046 chromosome 1	2762956	672256	702728	2762956	protease,holin	Enterobacteria_phage(33.33%)	28	NA	NA
WP_002479791.1|672256_674356_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.2	1.0e-113
WP_060803590.1|674518_675205_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_103363897.1|675217_676753_+	gluconokinase	NA	NA	NA	NA	NA
WP_103363898.1|676889_678251_+	gluconate permease	NA	NA	NA	NA	NA
WP_103363899.1|678321_679101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103363900.1|679145_680399_+	acetylornithine deacetylase	NA	NA	NA	NA	NA
WP_002479785.1|680495_682664_-	RNA degradosome polyphosphate kinase	NA	NA	NA	NA	NA
WP_031262477.1|682870_684400_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_002479783.1|684745_685207_+	DUF1307 domain-containing protein	NA	NA	NA	NA	NA
WP_103363901.1|685417_686026_+	stage II sporulation protein M	NA	NA	NA	NA	NA
WP_103363902.1|686218_687007_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_103363903.1|687194_687938_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_023015085.1|688106_688775_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	34.2	8.8e-19
WP_002479779.1|688771_689551_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_023015084.1|689722_690886_+	MFS transporter	NA	NA	NA	NA	NA
WP_103363904.1|690924_692307_-	carboxylesterase/lipase family protein	NA	NA	NA	NA	NA
WP_103363905.1|692386_694024_-	APC family permease	NA	NA	NA	NA	NA
WP_070625145.1|694501_695098_+	YdeI/OmpD-associated family protein	NA	NA	NA	NA	NA
WP_023015081.1|695565_696780_+|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	Q6GZ03	Mycoplasma_phage	50.5	3.8e-20
WP_002479772.1|696779_697409_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002479771.1|697440_698385_+	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002479770.1|698384_699074_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_103363906.1|699167_699935_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_103363907.1|700048_700591_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002479767.1|700592_700955_-	DUF3147 family protein	NA	NA	NA	NA	NA
WP_002479766.1|700974_701334_-	DUF3147 family protein	NA	NA	NA	NA	NA
WP_002479765.1|701568_702270_-|holin	antiholin-like protein LrgB	holin	NA	NA	NA	NA
WP_002479764.1|702266_702728_-|holin	antiholin-like murein hydrolase modulator LrgA	holin	NA	NA	NA	NA
>prophage 2
NZ_LS483313	Staphylococcus simulans strain NCTC11046 chromosome 1	2762956	1226468	1260837	2762956	tRNA	Staphylococcus_phage(92.59%)	35	NA	NA
WP_070626279.1|1226468_1228511_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	30.3	4.1e-67
WP_103364072.1|1228770_1229262_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023016242.1|1229462_1230155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103364061.1|1230270_1231659_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	57.1	5.0e-157
WP_103364060.1|1231661_1232672_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	53.4	6.7e-95
WP_002481260.1|1232662_1232920_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	75.7	4.7e-29
WP_002481259.1|1232997_1233489_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	50.3	1.0e-35
WP_057509771.1|1233454_1234228_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	66.5	1.3e-93
WP_002481257.1|1234280_1235873_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	81.4	4.0e-259
WP_002481256.1|1236260_1237457_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	81.4	8.8e-187
WP_103364059.1|1237553_1238453_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	75.4	4.0e-99
WP_103364058.1|1238574_1239411_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	65.7	1.2e-102
WP_002481253.1|1239462_1239816_-	CrcB family protein	NA	NA	NA	NA	NA
WP_103364057.1|1239808_1240180_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	64.5	8.0e-38
WP_057509776.1|1240240_1240549_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002481250.1|1240736_1241453_+	transaldolase	NA	M1PR54	Cyanophage	35.0	3.8e-20
WP_103364056.1|1241594_1242056_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	41.6	1.8e-18
WP_126498008.1|1242030_1242390_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103364054.1|1242470_1242968_-	RNA polymerase subunit sigma	NA	A0A2H4PQT5	Staphylococcus_phage	42.5	2.4e-21
WP_023016000.1|1243172_1243394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002481245.1|1243795_1244641_+	glucosaminidase domain-containing protein	NA	A0A1W6JNR1	Staphylococcus_phage	41.7	4.2e-42
WP_002481244.1|1244782_1246264_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	64.5	1.0e-14
WP_103364053.1|1246657_1247707_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	59.4	1.0e-117
WP_057509781.1|1247711_1248344_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	61.4	2.8e-67
WP_103364052.1|1248359_1249541_+	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	73.5	1.4e-168
WP_070626312.1|1249573_1250035_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	75.2	3.9e-58
WP_023015993.1|1250108_1251104_-	proline dehydrogenase family protein	NA	A0A2H4PQT6	Staphylococcus_phage	63.3	5.8e-115
WP_002481238.1|1251365_1252196_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_002481237.1|1252372_1253329_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_103364051.1|1253394_1253952_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	61.6	3.0e-60
WP_002481235.1|1253948_1254911_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	84.4	2.5e-67
WP_002481234.1|1255183_1256362_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	73.2	3.0e-163
WP_103364050.1|1256741_1259156_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	84.8	0.0e+00
WP_002481231.1|1259176_1259494_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	66.7	1.5e-32
WP_103364049.1|1259580_1260837_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	75.0	2.6e-40
>prophage 3
NZ_LS483313	Staphylococcus simulans strain NCTC11046 chromosome 1	2762956	1381869	1391942	2762956	tRNA	Klosneuvirus(33.33%)	7	NA	NA
WP_103363648.1|1381869_1384143_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.9	2.7e-75
WP_103363649.1|1384161_1384680_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	44.4	6.2e-28
WP_103363650.1|1385030_1387220_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	38.0	9.0e-12
WP_002481116.1|1387235_1387688_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_002481115.1|1387684_1388560_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.1	6.8e-11
WP_002481114.1|1388885_1390160_+|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L6G5	Tupanvirus	23.8	3.9e-15
WP_103363651.1|1390175_1391942_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SIS0	Klosneuvirus	33.7	9.2e-07
>prophage 4
NZ_LS483313	Staphylococcus simulans strain NCTC11046 chromosome 1	2762956	1967904	1976326	2762956		Prochlorococcus_phage(33.33%)	9	NA	NA
WP_023015953.1|1967904_1968471_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.3	2.6e-32
WP_103364332.1|1968467_1969508_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.1	9.1e-71
WP_002480500.1|1969512_1970934_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	30.8	5.6e-47
WP_103364331.1|1970912_1973102_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.4	7.4e-139
WP_002480498.1|1973094_1973766_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_103364330.1|1973765_1974026_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_103364329.1|1974025_1974730_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	42.5	4.3e-48
WP_103364328.1|1974729_1975857_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_103364327.1|1975843_1976326_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.3	1.2e-22
>prophage 5
NZ_LS483313	Staphylococcus simulans strain NCTC11046 chromosome 1	2762956	1990416	2037344	2762956	capsid,head,plate,portal,terminase,protease,tail	uncultured_Caudovirales_phage(38.71%)	69	NA	NA
WP_103364322.1|1990416_1991706_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	71.3	2.2e-167
WP_103364321.1|1991721_1992123_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	62.8	1.5e-42
WP_103364316.1|1993458_1994016_-	hypothetical protein	NA	W5R8Q1	Staphylococcus_phage	42.5	9.2e-38
WP_111713484.1|1994651_1996124_-	peptidoglycan DD-metalloendopeptidase family protein	NA	Q4ZD58	Staphylococcus_phage	76.5	3.5e-217
WP_070626834.1|1996125_1996374_-	PTS mannose transporter subunit IID	NA	Q4ZD59	Staphylococcus_phage	86.6	8.5e-36
WP_103364466.1|1996421_1996820_-	hypothetical protein	NA	A0A2H4JCM1	uncultured_Caudovirales_phage	88.6	2.3e-59
WP_070626273.1|1996806_1997229_-	hypothetical protein	NA	A0A2H4JID2	uncultured_Caudovirales_phage	80.7	8.2e-63
WP_083309983.1|1997266_1997419_-	XkdX family protein	NA	A0A1W6JQ64	Staphylococcus_phage	88.0	1.1e-20
WP_103364467.1|1997420_1997822_-	hypothetical protein	NA	A0A1W6JQ86	Staphylococcus_phage	83.1	6.2e-36
WP_159081712.1|1997835_1999341_-|plate	BppU family phage baseplate upper protein	plate	A0A1W6JQ87	Staphylococcus_phage	73.1	2.2e-150
WP_103364469.1|1999352_2001968_-	peptidase G2	NA	A0A2H4JF10	uncultured_Caudovirales_phage	76.3	0.0e+00
WP_103364470.1|2001982_2002549_-	hypothetical protein	NA	A0A1W6JQ70	Staphylococcus_phage	74.8	3.0e-84
WP_103364471.1|2002541_2004131_-|tail	phage tail protein	tail	A0A2H4JAF8	uncultured_Caudovirales_phage	90.9	4.5e-287
WP_103364472.1|2004140_2004968_-|tail	phage tail family protein	tail	A0A2H4JAE4	uncultured_Caudovirales_phage	91.3	5.1e-149
WP_103364473.1|2004969_2009412_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A2H4JDT7	uncultured_Caudovirales_phage	60.5	5.6e-295
WP_156423350.1|2009439_2009592_-	hypothetical protein	NA	A0A0N9SKE8	Staphylococcus_phage	86.0	3.2e-17
WP_060804350.1|2009624_2009987_-	hypothetical protein	NA	A0A2H4J3M2	uncultured_Caudovirales_phage	96.7	3.1e-58
WP_060804351.1|2010054_2010240_-	hypothetical protein	NA	A0A0N9STM6	Staphylococcus_phage	91.8	1.7e-25
WP_060804352.1|2010258_2010894_-|tail	phage tail protein	tail	A0A2H4JH93	uncultured_Caudovirales_phage	90.0	1.4e-101
WP_060804353.1|2010906_2011311_-	hypothetical protein	NA	A0A2H4J9Z2	uncultured_Caudovirales_phage	88.8	4.9e-65
WP_070501947.1|2011315_2011723_-	hypothetical protein	NA	A0A1D6Z2A1	Staphylococcus_phage	43.7	8.6e-25
WP_060804355.1|2011719_2012049_-	hypothetical protein	NA	A0A2H4J9E0	uncultured_Caudovirales_phage	87.2	1.7e-52
WP_103364474.1|2012038_2012380_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JDD1	uncultured_Caudovirales_phage	85.8	7.6e-51
WP_060804357.1|2012398_2013733_-|capsid	phage major capsid protein	capsid	A0A2H4J411	uncultured_Caudovirales_phage	91.2	5.3e-172
WP_103364475.1|2013774_2014332_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4J792	uncultured_Caudovirales_phage	64.0	5.4e-62
WP_103364476.1|2014321_2015554_-|portal	phage portal protein	portal	H9A113	Staphylococcus_phage	95.9	1.4e-227
WP_060804360.1|2015553_2015748_-	hypothetical protein	NA	A0A2H4J9T6	uncultured_Caudovirales_phage	90.6	1.1e-22
WP_103364477.1|2015759_2017454_-|terminase	terminase large subunit	terminase	A0A2H4JC16	uncultured_Caudovirales_phage	91.5	9.6e-304
WP_103364478.1|2017440_2017908_-|terminase	phage terminase small subunit P27 family	terminase	A0A2H4J4D1	uncultured_Caudovirales_phage	96.1	1.2e-78
WP_103364479.1|2018079_2018439_-	HNH endonuclease	NA	A0A2H4J8X0	uncultured_Caudovirales_phage	81.7	8.0e-51
WP_103364480.1|2018985_2019432_-	transcriptional regulator	NA	A0A2H4JCR6	uncultured_Caudovirales_phage	73.8	3.8e-58
WP_103364481.1|2019627_2019804_-	transcriptional regulator	NA	Q4ZC79	Staphylococcus_virus	91.4	9.4e-21
WP_060804557.1|2019796_2019988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170121966.1|2020030_2020573_-	dUTP pyrophosphatase	NA	I6SB33	Staphylococcus_virus	65.6	5.1e-57
WP_103364438.1|2020569_2020806_-	hypothetical protein	NA	Q4ZC83	Staphylococcus_virus	75.6	2.5e-24
WP_111713485.1|2020805_2021231_-	hypothetical protein	NA	Q4ZC86	Staphylococcus_virus	66.9	2.9e-39
WP_015978124.1|2021247_2021712_-	ORF027	NA	Q4ZC87	Staphylococcus_virus	100.0	2.6e-86
WP_103364441.1|2021701_2021902_-	hypothetical protein	NA	Q4ZC88	Staphylococcus_virus	96.8	8.4e-26
WP_158263702.1|2021901_2022078_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103364442.1|2022078_2022501_-	DUF3310 domain-containing protein	NA	A0A2R3ZXJ2	Staphylococcus_phage	53.8	1.7e-12
WP_103364443.1|2022501_2023029_-	hypothetical protein	NA	Q4ZC91	Staphylococcus_virus	95.4	2.9e-89
WP_103364444.1|2023031_2023217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103364445.1|2023217_2023625_-	RusA family crossover junction endodeoxyribonuclease	NA	Q4ZC94	Staphylococcus_virus	75.6	4.5e-58
WP_070724741.1|2023608_2023791_-	hypothetical protein	NA	Q4ZC95	Staphylococcus_virus	98.3	3.1e-27
WP_070684218.1|2023790_2024576_-	ATP-binding protein	NA	A0A1W6JPS4	Staphylococcus_phage	63.6	3.6e-96
WP_070463388.1|2024576_2025305_-	conserved phage C-terminal domain-containing protein	NA	Q6R839	Staphylococcus_virus	56.5	3.2e-70
WP_060804384.1|2025367_2026018_+	hypothetical protein	NA	A0A2H4J7C1	uncultured_Caudovirales_phage	39.3	3.6e-33
WP_103364446.1|2026129_2026792_-	hypothetical protein	NA	Q4ZC99	Staphylococcus_virus	95.9	1.0e-123
WP_103364447.1|2026804_2027251_-	single-stranded DNA-binding protein	NA	A0A1J0MFD7	Staphylococcus_phage	92.8	3.1e-52
WP_070867124.1|2027250_2027922_-	ERF family protein	NA	A0A1J0MF78	Staphylococcus_phage	90.5	8.4e-110
WP_103364448.1|2027921_2028407_-	siphovirus Gp157 family protein	NA	W5R8N0	Staphylococcus_phage	61.3	4.1e-50
WP_060803545.1|2028409_2028676_-	DUF1108 family protein	NA	A0A223LGN1	Staphylococcus_phage	40.0	4.6e-11
WP_103364449.1|2028779_2028995_-	hypothetical protein	NA	Q4ZCA4	Staphylococcus_virus	88.6	9.1e-26
WP_103364450.1|2029118_2029373_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070626520.1|2029543_2029777_-	hypothetical protein	NA	A0A2H4J7P2	uncultured_Caudovirales_phage	79.2	6.0e-23
WP_070626519.1|2029847_2030183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070626518.1|2030183_2030402_-	hypothetical protein	NA	A0A2H4JBS5	uncultured_Caudovirales_phage	49.3	5.8e-12
WP_015978143.1|2030483_2030714_+	hypothetical protein	NA	Q4ZCA7	Staphylococcus_virus	100.0	2.5e-37
WP_015978164.1|2030673_2030814_-	hypothetical protein	NA	Q4ZCA8	Staphylococcus_virus	100.0	1.5e-18
WP_060803541.1|2030895_2031210_+	hypothetical protein	NA	A0A2H4JBC2	uncultured_Caudovirales_phage	88.5	8.6e-49
WP_057510932.1|2031333_2031561_-	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	73.0	6.9e-24
WP_103364250.1|2031561_2032335_-	phage antirepressor KilAC domain-containing protein	NA	Q4ZCB0	Staphylococcus_virus	98.4	9.5e-142
WP_070724727.1|2032385_2032856_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103364251.1|2032818_2033052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_070626471.1|2033065_2033818_-	phage antirepressor KilAC domain-containing protein	NA	S4SW96	Staphylococcus_phage	93.6	3.3e-131
WP_103364320.1|2033832_2034072_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J3I3	uncultured_Caudovirales_phage	86.1	4.7e-31
WP_103364319.1|2034261_2034936_+	LexA family transcriptional regulator	NA	A0A1W6JPS3	Staphylococcus_phage	89.3	3.6e-113
WP_103364318.1|2034951_2035635_+	hypothetical protein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	52.4	7.4e-05
WP_170121956.1|2035967_2037344_+	recombinase family protein	NA	H9A0K0	Staphylococcus_phage	47.4	5.2e-98
>prophage 6
NZ_LS483313	Staphylococcus simulans strain NCTC11046 chromosome 1	2762956	2228840	2324843	2762956	capsid,head,portal,transposase,terminase,integrase,protease,tail	Staphylococcus_phage(54.43%)	123	2268066:2268081	2331436:2331451
WP_002479755.1|2228840_2230175_+|transposase	IS1182 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	47.5	2.7e-112
WP_070724768.1|2230954_2232427_-	peptidoglycan DD-metalloendopeptidase family protein	NA	Q4ZD58	Staphylococcus_phage	75.2	2.3e-213
WP_070626834.1|2232428_2232677_-	PTS mannose transporter subunit IID	NA	Q4ZD59	Staphylococcus_phage	86.6	8.5e-36
WP_103364452.1|2232724_2233120_-	hypothetical protein	NA	A0A1D6Z274	Staphylococcus_phage	75.6	2.0e-47
WP_103364454.1|2233557_2233842_-	hypothetical protein	NA	A0A1J0MFP4	Staphylococcus_phage	66.3	1.3e-24
WP_159081715.1|2233885_2234053_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103364455.1|2234039_2238689_-	hypothetical protein	NA	A0A2H4J300	uncultured_Caudovirales_phage	43.9	0.0e+00
WP_103364456.1|2238704_2240198_-|tail	phage tail family protein	tail	A0A1J0MFV2	Staphylococcus_phage	69.3	1.9e-207
WP_103364457.1|2240199_2245206_-|tail	phage tail tape measure protein	tail	A0A1J0MFP9	Staphylococcus_phage	58.1	1.7e-268
WP_103364464.1|2245223_2245346_-	hypothetical protein	NA	A0A1J0MFX7	Staphylococcus_phage	87.5	2.5e-12
WP_023016035.1|2245405_2245852_-	hypothetical protein	NA	A0A1J0MFL9	Staphylococcus_phage	62.8	4.8e-45
WP_082709482.1|2245920_2246634_-	hypothetical protein	NA	A0A1J0MFV0	Staphylococcus_phage	81.3	3.4e-101
WP_060804532.1|2246645_2247008_-	hypothetical protein	NA	A0A1J0MFP0	Staphylococcus_phage	70.0	7.3e-44
WP_060804534.1|2247004_2247382_-	HK97 gp10 family phage protein	NA	A0A1J0MGE3	Staphylococcus_phage	60.8	1.4e-37
WP_023016039.1|2247381_2247714_-|head,tail	head-tail adaptor protein	head,tail	A0A1J0MG09	Staphylococcus_phage	75.5	4.2e-46
WP_031262785.1|2247694_2247985_-|head,tail	phage head-tail connector protein	head,tail	A0A1J0MFU4	Staphylococcus_phage	74.2	2.6e-36
WP_170121958.1|2247994_2248150_-	hypothetical protein	NA	A0A1J0MFP2	Staphylococcus_phage	68.6	3.2e-09
WP_103364458.1|2248163_2249402_-|capsid	phage major capsid protein	capsid	A0A1J0MFW8	Staphylococcus_phage	73.5	3.3e-160
WP_103364459.1|2249495_2250071_-|head,protease	HK97 family phage prohead protease	head,protease	A0A1J0MFL1	Staphylococcus_phage	78.0	2.7e-80
WP_070864596.1|2250063_2251320_-|portal	phage portal protein	portal	A0A1J0MFU3	Staphylococcus_phage	83.0	3.1e-198
WP_103364460.1|2251324_2251522_-	hypothetical protein	NA	A0A1J0MFN2	Staphylococcus_phage	48.4	2.1e-05
WP_060804546.1|2251533_2253237_-|terminase	terminase	terminase	A0A1J0MGD9	Staphylococcus_phage	84.5	5.5e-283
WP_023016047.1|2253233_2253707_-|terminase	phage terminase small subunit P27 family	terminase	D2JLE3	Staphylococcus_phage	81.3	3.9e-69
WP_103364461.1|2253799_2254156_-	HNH endonuclease	NA	A0A1J0MFT4	Staphylococcus_phage	82.2	3.8e-53
WP_070684441.1|2254170_2254554_-	hypothetical protein	NA	A0A1J0MFN7	Staphylococcus_phage	56.7	4.3e-34
WP_023016050.1|2254732_2255131_-	hypothetical protein	NA	U3PBR8	Staphylococcus_phage	84.7	1.5e-58
WP_023016051.1|2255211_2255397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103364462.1|2255527_2255704_-	transcriptional regulator	NA	Q4ZC79	Staphylococcus_virus	91.4	8.5e-22
WP_103364463.1|2255721_2255976_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170121959.1|2255987_2256161_-	hypothetical protein	NA	A0A1W6JQ45	Staphylococcus_phage	71.9	8.6e-19
WP_111713487.1|2256197_2256737_-	dUTP pyrophosphatase	NA	A0A2H4J5Z8	uncultured_Caudovirales_phage	67.4	2.3e-57
WP_103364233.1|2256729_2256963_-	hypothetical protein	NA	Q4ZC83	Staphylococcus_virus	93.5	1.1e-16
WP_103364234.1|2256962_2257409_-	hypothetical protein	NA	Q4ZC87	Staphylococcus_virus	61.9	5.3e-44
WP_103364235.1|2257398_2257593_-	hypothetical protein	NA	Q4ZC88	Staphylococcus_virus	85.9	3.2e-22
WP_103364236.1|2257593_2258064_-	DUF3310 domain-containing protein	NA	Q4ZC89	Staphylococcus_virus	95.5	2.7e-83
WP_103364237.1|2258064_2258580_-	hypothetical protein	NA	Q4ZC91	Staphylococcus_virus	39.2	3.3e-21
WP_103364238.1|2258592_2258784_-	hypothetical protein	NA	Q4ZC92	Staphylococcus_virus	95.2	7.3e-27
WP_103364239.1|2258784_2259192_-	RusA family crossover junction endodeoxyribonuclease	NA	Q4ZC94	Staphylococcus_virus	92.6	3.1e-67
WP_070468927.1|2259357_2260131_-	ATP-binding protein	NA	A0A1W6JP70	Staphylococcus_phage	81.4	5.8e-107
WP_103364240.1|2260141_2260864_-	helix-turn-helix domain-containing protein	NA	A0A2H4JDN4	uncultured_Caudovirales_phage	86.2	1.6e-90
WP_103364241.1|2260856_2261264_-	HNH endonuclease	NA	A0A2H4J7B0	uncultured_Caudovirales_phage	91.1	3.8e-65
WP_103364242.1|2261256_2261934_-	hypothetical protein	NA	Q4ZC99	Staphylococcus_virus	69.8	4.6e-92
WP_103364243.1|2261948_2262470_-	DUF669 domain-containing protein	NA	A9CR64	Staphylococcus_phage	77.5	7.8e-71
WP_103364244.1|2262492_2263266_-	AAA family ATPase	NA	A0A0H4ITW3	Staphylococcus_phage	83.7	3.9e-119
WP_103364245.1|2263262_2263748_-	siphovirus Gp157 family protein	NA	W5R8N0	Staphylococcus_phage	62.0	7.0e-50
WP_103364246.1|2263750_2264017_-	DUF1108 family protein	NA	A0A223LGN1	Staphylococcus_phage	40.0	1.3e-10
WP_103364247.1|2264113_2264341_-	hypothetical protein	NA	Q4ZCA4	Staphylococcus_virus	71.2	1.6e-20
WP_060804182.1|2264358_2264577_-	hypothetical protein	NA	A0A1J0MG48	Staphylococcus_phage	67.7	4.9e-19
WP_060804181.1|2264642_2264933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156423345.1|2264926_2265064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103364248.1|2265135_2265465_+	hypothetical protein	NA	M9NS98	Staphylococcus_phage	63.9	2.9e-31
WP_103364249.1|2265453_2265669_-	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	75.7	1.5e-25
WP_107593760.1|2265751_2266222_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111713488.1|2266184_2266418_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103364252.1|2266432_2267182_-	phage antirepressor KilAC domain-containing protein	NA	A0A1X9H0A0	Staphylococcus_phage	87.1	1.2e-117
WP_070724721.1|2267195_2267642_-	hypothetical protein	NA	Q4ZCB1	Staphylococcus_virus	87.8	1.5e-70
WP_070626472.1|2267654_2267894_-	helix-turn-helix transcriptional regulator	NA	G4KNM9	Staphylococcus_phage	83.5	4.7e-31
WP_070724718.1|2268063_2268765_+	LexA family transcriptional regulator	NA	Q9MBT4	Staphylococcus_prophage	52.7	4.4e-61
2268066:2268081	attL	GACTTCATTTTCTTCA	NA	NA	NA	NA
WP_103364261.1|2268839_2269418_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070463375.1|2269515_2269698_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060804169.1|2269972_2270206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103364253.1|2270294_2271344_+|integrase	site-specific integrase	integrase	A0A2H4J4I8	uncultured_Caudovirales_phage	88.5	3.4e-182
WP_002481616.1|2271411_2272809_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_023015332.1|2273007_2273478_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_031262596.1|2273467_2274709_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.6	3.2e-107
WP_057510817.1|2274907_2276215_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_002481612.1|2276280_2277039_-	Fe-S cluster assembly ATPase SufC	NA	A0A2R8FG22	Brazilian_cedratvirus	28.3	1.8e-07
WP_023015351.1|2277398_2278226_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002481594.1|2278250_2278946_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002481593.1|2278938_2279964_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	37.9	1.4e-28
WP_002481592.1|2280226_2280523_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_103364254.1|2280519_2280882_-	topiosmerase	NA	NA	NA	NA	NA
WP_002481590.1|2281173_2281554_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_002481589.1|2281708_2282065_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	47.7	5.9e-22
WP_103364255.1|2282207_2282528_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	36.4	8.3e-07
WP_002481587.1|2282596_2283139_-	nitroreductase	NA	NA	NA	NA	NA
WP_103364256.1|2283212_2283938_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	28.8	3.7e-10
WP_103364257.1|2284345_2284861_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_023015356.1|2285085_2285289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103364258.1|2285757_2286615_-	TPM domain-containing protein	NA	NA	NA	NA	NA
WP_002481583.1|2286611_2287193_-	LemA family protein	NA	NA	NA	NA	NA
WP_002481582.1|2287410_2288715_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_002479755.1|2288865_2290200_+|transposase	IS1182 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	47.5	2.7e-112
WP_103363995.1|2290420_2291167_+	hypothetical protein	NA	A0A2H4J494	uncultured_Caudovirales_phage	79.4	7.6e-19
WP_002481579.1|2291241_2291445_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	67.7	4.1e-20
WP_060804163.1|2291807_2292620_+	oxidoreductase	NA	NA	NA	NA	NA
WP_103363999.1|2292701_2293316_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_155974688.1|2293753_2293915_+	hypothetical protein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	69.8	1.4e-10
WP_103363994.1|2293916_2294444_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	38.1	1.4e-14
WP_002481575.1|2295055_2295526_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	84.9	3.2e-68
WP_103363993.1|2295589_2297953_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.5	1.7e-93
WP_070847867.1|2297996_2298737_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_002481572.1|2298830_2299067_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_002481571.1|2299155_2299623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002481570.1|2299815_2301120_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	78.7	4.5e-192
WP_002481569.1|2301213_2302731_-	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_002481568.1|2302732_2303494_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_002481567.1|2303533_2304724_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_002481566.1|2304990_2305998_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_002481565.1|2306051_2307077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002481564.1|2307380_2307605_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103363992.1|2307649_2308432_-	DUF4887 domain-containing protein	NA	NA	NA	NA	NA
WP_103363991.1|2309015_2309918_+	TIGR01777 family protein	NA	NA	NA	NA	NA
WP_002481561.1|2310268_2310853_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.8	4.8e-53
WP_061054834.1|2311883_2312243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060804156.1|2312324_2312633_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_061054835.1|2312692_2314336_-|terminase	terminase large subunit	terminase	A0A290GJW3	Caldibacillus_phage	50.3	6.5e-156
WP_060804154.1|2314328_2314649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060804153.1|2314783_2315077_-	hypothetical protein	NA	R9TNN2	Paenibacillus_phage	44.9	1.5e-18
WP_060804152.1|2315069_2315351_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_060804151.1|2315416_2316649_-|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
WP_103363990.1|2316650_2317217_-|head,protease	HK97 family phage prohead protease	head,protease	Q9AZY6	Lactococcus_phage	29.6	6.8e-12
WP_170121960.1|2317203_2318406_-|portal	phage portal protein	portal	A0A1L2BY94	Clostridium_phage	34.9	1.4e-59
WP_103363989.1|2318528_2318870_-	pathogenicity island protein	NA	A0A1W6JQD5	Staphylococcus_phage	69.6	1.4e-41
WP_103363988.1|2319141_2320620_-	virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	74.7	7.0e-218
WP_070724661.1|2320620_2321538_-	primase C-terminal domain-containing protein	NA	A0A1W6JQL5	Staphylococcus_phage	43.8	1.5e-61
WP_103363987.1|2321571_2321868_-	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	48.0	1.6e-20
WP_103363986.1|2321868_2322279_-	pathogenicity island protein	NA	A0A2H4JBF1	uncultured_Caudovirales_phage	88.8	3.7e-60
WP_103363985.1|2322268_2322484_-	pathogenicity island protein	NA	A0A1W6JQF4	Staphylococcus_phage	64.2	3.9e-21
WP_103363984.1|2322500_2322746_-	DUF771 domain-containing protein	NA	NA	NA	NA	NA
WP_103363997.1|2322766_2322982_-	helix-turn-helix transcriptional regulator	NA	A0A1B2APY7	Phage_Wrath	42.6	1.4e-05
WP_159081716.1|2323040_2323763_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_103363982.1|2323793_2324843_+|integrase	site-specific integrase	integrase	A0A1W6JQE7	Staphylococcus_phage	41.2	5.8e-65
2331436:2331451	attR	GACTTCATTTTCTTCA	NA	NA	NA	NA
>prophage 7
NZ_LS483313	Staphylococcus simulans strain NCTC11046 chromosome 1	2762956	2365643	2378124	2762956		uncultured_Caudovirales_phage(50.0%)	10	NA	NA
WP_103363996.1|2365643_2366612_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.1	3.9e-132
WP_002481524.1|2366917_2367892_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	90.7	2.1e-170
WP_023015386.1|2368004_2370110_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	88.2	0.0e+00
WP_023015387.1|2370072_2370474_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	65.4	1.8e-43
WP_002481521.1|2371358_2372246_+	DMT family transporter	NA	NA	NA	NA	NA
WP_002481520.1|2372248_2372752_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	70.1	6.6e-51
WP_103363972.1|2372934_2374458_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	37.7	7.1e-72
WP_002481518.1|2374752_2376255_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	34.3	3.0e-67
WP_002481517.1|2376381_2376918_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_060804120.1|2377059_2378124_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	24.9	6.3e-19
