assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900324385.1_20_LA_415	NZ_LT992475	Staphylococcus aureus isolate 20_LA_415 chromosome I	1	193103-193253	1	CRISPRCasFinder	no	TnsE_C,csa3	WYL,TnsE_C,csa3,DEDDh,cas3,DinG	Type I-A	TGCATAAGAGCCCCTTACAACTAAAGTT	28	0	0	NA	NA	NA	2	2	Orphan	WYL,TnsE_C,csa3,DEDDh,cas3,DinG	NA|107aa|up_9|NZ_LT992475.1_184566_184887_+,NA|31aa|up_2|NZ_LT992475.1_191302_191395_-,NA|53aa|up_1|NZ_LT992475.1_191830_191989_-,NA|35aa|up_0|NZ_LT992475.1_192668_192773_+,NA|364aa|down_0|NZ_LT992475.1_193270_194362_-,NA|77aa|down_5|NZ_LT992475.1_198149_198380_+	NA|107aa|up_9|NZ_LT992475.1_184566_184887_+	NA	TnsE_C|135aa|up_8|NZ_LT992475.1_185064_185469_+	pfam18623, TnsE_C, TnsE C-terminal domain	NA|97aa|up_7|NZ_LT992475.1_185593_185884_+	pfam11867, DUF3387, Domain of unknown function (DUF3387)	NA|345aa|up_6|NZ_LT992475.1_187505_188540_+	pfam13676, TIR_2, TIR domain	NA|203aa|up_5|NZ_LT992475.1_188567_189176_+	pfam08937, DUF1863, MTH538 TIR-like domain (DUF1863)	NA|261aa|up_4|NZ_LT992475.1_189465_190248_+	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|286aa|up_3|NZ_LT992475.1_190315_191173_+	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|31aa|up_2|NZ_LT992475.1_191302_191395_-	NA	NA|53aa|up_1|NZ_LT992475.1_191830_191989_-	NA	NA|35aa|up_0|NZ_LT992475.1_192668_192773_+	NA	NA|364aa|down_0|NZ_LT992475.1_193270_194362_-	NA	NA|327aa|down_1|NZ_LT992475.1_194627_195608_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	csa3|107aa|down_2|NZ_LT992475.1_195609_195930_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|222aa|down_3|NZ_LT992475.1_196081_196747_+	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|313aa|down_4|NZ_LT992475.1_197180_198119_+	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|77aa|down_5|NZ_LT992475.1_198149_198380_+	NA	NA|458aa|down_6|NZ_LT992475.1_199051_200425_+	pfam01878, EVE, EVE domain	NA|138aa|down_7|NZ_LT992475.1_200882_201296_+	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|148aa|down_8|NZ_LT992475.1_201495_201939_+	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|237aa|down_9|NZ_LT992475.1_202059_202770_-	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase
GCF_900324385.1_20_LA_415	NZ_LT992475	Staphylococcus aureus isolate 20_LA_415 chromosome I	2	619575-619657	2	CRISPRCasFinder	no		WYL,TnsE_C,csa3,DEDDh,cas3,DinG	Orphan	GTAAGCTGACTTTTTCGTCAGCTTC	25	0	0	NA	NA	NA	1	1	Orphan	WYL,TnsE_C,csa3,DEDDh,cas3,DinG	NA,NA	NA|383aa|up_9|NZ_LT992475.1_609098_610247_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|408aa|up_8|NZ_LT992475.1_610246_611470_+	PRK01565, PRK01565, thiamine biosynthesis protein ThiI; Provisional	NA|257aa|up_7|NZ_LT992475.1_611513_612284_+	PRK10621, PRK10621, hypothetical protein; Provisional	NA|165aa|up_6|NZ_LT992475.1_612381_612876_+	PRK00522, tpx, thiol peroxidase	NA|316aa|up_5|NZ_LT992475.1_612998_613946_+	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|401aa|up_4|NZ_LT992475.1_614033_615236_+	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|167aa|up_3|NZ_LT992475.1_615482_615983_-	pfam00582, Usp, Universal stress protein family	NA|373aa|up_2|NZ_LT992475.1_616123_617242_+	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|352aa|up_1|NZ_LT992475.1_617557_618613_-	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|230aa|up_0|NZ_LT992475.1_618787_619477_+	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|138aa|down_0|NZ_LT992475.1_619982_620396_-	pfam00582, Usp, Universal stress protein family	NA|433aa|down_1|NZ_LT992475.1_620600_621899_+	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]	NA|314aa|down_2|NZ_LT992475.1_622268_623210_+	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|1066aa|down_3|NZ_LT992475.1_623230_626428_+	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]	NA|410aa|down_4|NZ_LT992475.1_626876_628106_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|286aa|down_5|NZ_LT992475.1_628300_629158_+	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|315aa|down_6|NZ_LT992475.1_629157_630102_+	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|323aa|down_7|NZ_LT992475.1_630370_631339_+	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|586aa|down_8|NZ_LT992475.1_631360_633118_+	PRK06354, PRK06354, pyruvate kinase; Provisional	NA|454aa|down_9|NZ_LT992475.1_633461_634823_-	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]
GCF_900324385.1_20_LA_415	NZ_LT992475	Staphylococcus aureus isolate 20_LA_415 chromosome I	3	1547910-1547990	3	CRISPRCasFinder	no		WYL,TnsE_C,csa3,DEDDh,cas3,DinG	Orphan	GGGAGTGGGAGAGAAATGATAAAGA	25	1	1	1547935-1547965	NZ_LT992475.1_1602919-1602889	NA	1	1	Orphan	WYL,TnsE_C,csa3,DEDDh,cas3,DinG	NA|81aa|up_8|NZ_LT992475.1_1539208_1539451_+,NA	NA|328aa|up_9|NZ_LT992475.1_1538214_1539198_+	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|81aa|up_8|NZ_LT992475.1_1539208_1539451_+	NA	NA|350aa|up_7|NZ_LT992475.1_1539517_1540567_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|466aa|up_6|NZ_LT992475.1_1540634_1542032_-	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|155aa|up_5|NZ_LT992475.1_1542182_1542647_-	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|417aa|up_4|NZ_LT992475.1_1542636_1543887_-	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|436aa|up_3|NZ_LT992475.1_1543992_1545300_-	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|254aa|up_2|NZ_LT992475.1_1545398_1546160_-	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|284aa|up_1|NZ_LT992475.1_1546487_1547339_+	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|65aa|up_0|NZ_LT992475.1_1547572_1547767_-	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|274aa|down_0|NZ_LT992475.1_1548574_1549396_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|232aa|down_1|NZ_LT992475.1_1549413_1550109_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|342aa|down_2|NZ_LT992475.1_1550101_1551127_-	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|99aa|down_3|NZ_LT992475.1_1551376_1551673_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|129aa|down_4|NZ_LT992475.1_1551665_1552052_-	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|293aa|down_5|NZ_LT992475.1_1552753_1553632_-	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|127aa|down_6|NZ_LT992475.1_1553811_1554192_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|119aa|down_7|NZ_LT992475.1_1554349_1554706_-	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|107aa|down_8|NZ_LT992475.1_1554849_1555170_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|180aa|down_9|NZ_LT992475.1_1555319_1555859_-	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA
GCF_900324385.1_20_LA_415	NZ_LT992475	Staphylococcus aureus isolate 20_LA_415 chromosome I	4	1759520-1759628	4	CRISPRCasFinder	no		WYL,TnsE_C,csa3,DEDDh,cas3,DinG	Orphan	TTTATGCAGTTGTGCGGTAGCATCCAACTGCGTTCCTTT	39	0	0	NA	NA	NA	1	1	Orphan	WYL,TnsE_C,csa3,DEDDh,cas3,DinG	NA|239aa|up_5|NZ_LT992475.1_1754401_1755118_-,NA|169aa|up_4|NZ_LT992475.1_1755279_1755786_-,NA	NA|75aa|up_9|NZ_LT992475.1_1750524_1750749_+	pfam11148, DUF2922, Protein of unknown function (DUF2922)	NA|310aa|up_8|NZ_LT992475.1_1750941_1751871_+	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown]	NA|125aa|up_7|NZ_LT992475.1_1752818_1753193_+	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|263aa|up_6|NZ_LT992475.1_1753444_1754233_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|239aa|up_5|NZ_LT992475.1_1754401_1755118_-	NA	NA|169aa|up_4|NZ_LT992475.1_1755279_1755786_-	NA	NA|267aa|up_3|NZ_LT992475.1_1755921_1756722_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|240aa|up_2|NZ_LT992475.1_1756705_1757425_-	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|317aa|up_1|NZ_LT992475.1_1757479_1758430_-	pfam01032, FecCD, FecCD transport family	NA|296aa|up_0|NZ_LT992475.1_1758580_1759468_-	cd01143, YvrC, Periplasmic binding protein YvrC	NA|212aa|down_0|NZ_LT992475.1_1759797_1760433_-	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|554aa|down_1|NZ_LT992475.1_1760917_1762579_-	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|139aa|down_2|NZ_LT992475.1_1762575_1762992_-	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown]	NA|337aa|down_3|NZ_LT992475.1_1763267_1764278_-	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional	NA|174aa|down_4|NZ_LT992475.1_1764776_1765298_-	pfam08741, YwhD, YwhD family	NA|432aa|down_5|NZ_LT992475.1_1765325_1766621_-	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|159aa|down_6|NZ_LT992475.1_1766660_1767137_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|179aa|down_7|NZ_LT992475.1_1767306_1767843_-	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|313aa|down_8|NZ_LT992475.1_1768288_1769227_-	cd19083, AKR_AKR11A1_11D1, AKR11A and  AKR11D families of aldo-keto reductase (AKR)	NA|209aa|down_9|NZ_LT992475.1_1769496_1770123_-	pfam04276, DUF443, Protein of unknown function (DUF443)
GCF_900324385.1_20_LA_415	NZ_LT992475	Staphylococcus aureus isolate 20_LA_415 chromosome I	5	2709346-2709479	1	PILER-CR	no		WYL,TnsE_C,csa3,DEDDh,cas3,DinG	Orphan	TATTGAAGAAGATACAA	17	0	0	NA	NA	NA	2	2	Orphan	WYL,TnsE_C,csa3,DEDDh,cas3,DinG	NA,NA|103aa|down_1|NZ_LT992475.1_2714613_2714922_-,NA|89aa|down_2|NZ_LT992475.1_2715065_2715332_-	NA|388aa|up_9|NZ_LT992475.1_2693660_2694824_+	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily	NA|204aa|up_8|NZ_LT992475.1_2694921_2695533_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|426aa|up_7|NZ_LT992475.1_2696079_2697357_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|608aa|up_6|NZ_LT992475.1_2698268_2700092_+	COG1289, COG1289, Predicted membrane protein [Function unknown]	NA|139aa|up_5|NZ_LT992475.1_2700230_2700647_+	COG4876, COG4876, Uncharacterized protein conserved in bacteria [Function unknown]	NA|231aa|up_4|NZ_LT992475.1_2700877_2701570_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|263aa|up_3|NZ_LT992475.1_2701709_2702498_+	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|226aa|up_2|NZ_LT992475.1_2702654_2703332_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|518aa|up_1|NZ_LT992475.1_2703356_2704910_+	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type	NA|453aa|up_0|NZ_LT992475.1_2705026_2706385_+	TIGR00791, Gluconate_permease, gluconate transporter	NA|289aa|down_0|NZ_LT992475.1_2713621_2714488_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|103aa|down_1|NZ_LT992475.1_2714613_2714922_-	NA	NA|89aa|down_2|NZ_LT992475.1_2715065_2715332_-	NA	NA|584aa|down_3|NZ_LT992475.1_2715615_2717367_-	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|398aa|down_4|NZ_LT992475.1_2717442_2718636_-	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm)	NA|310aa|down_5|NZ_LT992475.1_2718731_2719661_+	pfam09019, EcoRII-C, EcoRII C terminal	NA|258aa|down_6|NZ_LT992475.1_2719903_2720677_+	pfam04507, DUF576, Csa1 family	NA|255aa|down_7|NZ_LT992475.1_2720788_2721553_+	pfam04507, DUF576, Csa1 family	NA|262aa|down_8|NZ_LT992475.1_2721800_2722586_+	pfam04507, DUF576, Csa1 family	NA|452aa|down_9|NZ_LT992475.1_2722582_2723938_+	cd00519, Lipase_3, Lipase (class 3)
GCF_900324385.1_20_LA_415	NZ_LT992475	Staphylococcus aureus isolate 20_LA_415 chromosome I	6	2712890-2713023	2	PILER-CR	no		WYL,TnsE_C,csa3,DEDDh,cas3,DinG	Orphan	TATTGAAGAAGATACAA	17	0	0	NA	NA	NA	2	2	Orphan	WYL,TnsE_C,csa3,DEDDh,cas3,DinG	NA,NA|103aa|down_1|NZ_LT992475.1_2714613_2714922_-,NA|89aa|down_2|NZ_LT992475.1_2715065_2715332_-	NA|204aa|up_9|NZ_LT992475.1_2694921_2695533_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|426aa|up_8|NZ_LT992475.1_2696079_2697357_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|608aa|up_7|NZ_LT992475.1_2698268_2700092_+	COG1289, COG1289, Predicted membrane protein [Function unknown]	NA|139aa|up_6|NZ_LT992475.1_2700230_2700647_+	COG4876, COG4876, Uncharacterized protein conserved in bacteria [Function unknown]	NA|231aa|up_5|NZ_LT992475.1_2700877_2701570_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|263aa|up_4|NZ_LT992475.1_2701709_2702498_+	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|226aa|up_3|NZ_LT992475.1_2702654_2703332_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|518aa|up_2|NZ_LT992475.1_2703356_2704910_+	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type	NA|453aa|up_1|NZ_LT992475.1_2705026_2706385_+	TIGR00791, Gluconate_permease, gluconate transporter	NA|1018aa|up_0|NZ_LT992475.1_2706853_2709907_+	pfam10425, SdrG_C_C, C-terminus of bacterial fibrinogen-binding adhesin	NA|289aa|down_0|NZ_LT992475.1_2713621_2714488_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|103aa|down_1|NZ_LT992475.1_2714613_2714922_-	NA	NA|89aa|down_2|NZ_LT992475.1_2715065_2715332_-	NA	NA|584aa|down_3|NZ_LT992475.1_2715615_2717367_-	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|398aa|down_4|NZ_LT992475.1_2717442_2718636_-	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm)	NA|310aa|down_5|NZ_LT992475.1_2718731_2719661_+	pfam09019, EcoRII-C, EcoRII C terminal	NA|258aa|down_6|NZ_LT992475.1_2719903_2720677_+	pfam04507, DUF576, Csa1 family	NA|255aa|down_7|NZ_LT992475.1_2720788_2721553_+	pfam04507, DUF576, Csa1 family	NA|262aa|down_8|NZ_LT992475.1_2721800_2722586_+	pfam04507, DUF576, Csa1 family	NA|452aa|down_9|NZ_LT992475.1_2722582_2723938_+	cd00519, Lipase_3, Lipase (class 3)
GCF_900324385.1_20_LA_415	NZ_LT992475	Staphylococcus aureus isolate 20_LA_415 chromosome I	7	2737487-2737581	5	CRISPRCasFinder	no		WYL,TnsE_C,csa3,DEDDh,cas3,DinG	Orphan	TTGCTTCGCAACAACTGCATAAGAGCCT	28	0	0	NA	NA	NA	1	1	Orphan	WYL,TnsE_C,csa3,DEDDh,cas3,DinG	NA|105aa|up_8|NZ_LT992475.1_2729328_2729643_-,NA|121aa|up_0|NZ_LT992475.1_2736455_2736818_+,NA|249aa|down_9|NZ_LT992475.1_2747248_2747995_-	NA|140aa|up_9|NZ_LT992475.1_2727032_2727452_+	pfam07252, DUF1433, Protein of unknown function (DUF1433)	NA|105aa|up_8|NZ_LT992475.1_2729328_2729643_-	NA	NA|403aa|up_7|NZ_LT992475.1_2729648_2730857_-	cd07657, F-BAR_Fes_Fer, The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fes (feline sarcoma) and Fer (Fes related) tyrosine kinases	NA|128aa|up_6|NZ_LT992475.1_2730923_2731307_+	pfam07252, DUF1433, Protein of unknown function (DUF1433)	NA|137aa|up_5|NZ_LT992475.1_2731761_2732172_+	pfam07252, DUF1433, Protein of unknown function (DUF1433)	NA|133aa|up_4|NZ_LT992475.1_2732198_2732597_+	pfam07252, DUF1433, Protein of unknown function (DUF1433)	NA|141aa|up_3|NZ_LT992475.1_2733068_2733491_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|513aa|up_2|NZ_LT992475.1_2733602_2735141_-	pfam03806, ABG_transport, AbgT putative transporter family	NA|273aa|up_1|NZ_LT992475.1_2735374_2736193_+	PRK08589, PRK08589, SDR family oxidoreductase	NA|121aa|up_0|NZ_LT992475.1_2736455_2736818_+	NA	NA|274aa|down_0|NZ_LT992475.1_2737766_2738588_+	COG0253, DapF, Diaminopimelate epimerase [Amino acid transport and metabolism]	NA|273aa|down_1|NZ_LT992475.1_2738598_2739417_+	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family	NA|434aa|down_2|NZ_LT992475.1_2739409_2740711_+	COG4408, COG4408, Uncharacterized protein conserved in bacteria [Function unknown]	NA|533aa|down_3|NZ_LT992475.1_2740853_2742452_+	TIGR02294, Nickel-binding_periplasmic_protein, nickel ABC transporter, nickel/metallophore periplasmic binding protein	NA|312aa|down_4|NZ_LT992475.1_2742464_2743400_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|290aa|down_5|NZ_LT992475.1_2743396_2744266_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|272aa|down_6|NZ_LT992475.1_2744262_2745078_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|250aa|down_7|NZ_LT992475.1_2745070_2745820_+	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|398aa|down_8|NZ_LT992475.1_2745831_2747025_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|249aa|down_9|NZ_LT992475.1_2747248_2747995_-	NA
GCF_900324385.1_20_LA_415	NZ_LT992475	Staphylococcus aureus isolate 20_LA_415 chromosome I	8	2781834-2781912	6	CRISPRCasFinder	no		WYL,TnsE_C,csa3,DEDDh,cas3,DinG	Orphan	TGCAAGTTGGCGGGGCCCCAACA	23	1	1	2781857-2781889	NZ_LT992475.1_2158161-2158129	NA	1	1	Orphan	WYL,TnsE_C,csa3,DEDDh,cas3,DinG	NA|220aa|up_3|NZ_LT992475.1_2778758_2779418_-,NA|36aa|up_0|NZ_LT992475.1_2781406_2781514_+,NA|56aa|down_2|NZ_LT992475.1_2785969_2786137_+	NA|693aa|up_9|NZ_LT992475.1_2771214_2773293_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|470aa|up_8|NZ_LT992475.1_2773430_2774840_-	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|269aa|up_7|NZ_LT992475.1_2775125_2775932_+	TIGR03729, acc_ester, putative phosphoesterase	NA|219aa|up_6|NZ_LT992475.1_2775994_2776651_-	COG4990, COG4990, Uncharacterized protein conserved in bacteria [Function unknown]	NA|158aa|up_5|NZ_LT992475.1_2776763_2777237_+	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|404aa|up_4|NZ_LT992475.1_2777359_2778571_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|220aa|up_3|NZ_LT992475.1_2778758_2779418_-	NA	NA|381aa|up_2|NZ_LT992475.1_2779477_2780620_-	TIGR00045, Glycerate_kinase, glycerate kinase	NA|129aa|up_1|NZ_LT992475.1_2780886_2781273_+	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|36aa|up_0|NZ_LT992475.1_2781406_2781514_+	NA	NA|588aa|down_0|NZ_LT992475.1_2782217_2783981_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|578aa|down_1|NZ_LT992475.1_2784005_2785739_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|56aa|down_2|NZ_LT992475.1_2785969_2786137_+	NA	NA|229aa|down_3|NZ_LT992475.1_2786191_2786878_+	COG0132, BioD, Dethiobiotin synthetase [Coenzyme metabolism]	NA|453aa|down_4|NZ_LT992475.1_2786855_2788214_+	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase	NA|336aa|down_5|NZ_LT992475.1_2788215_2789223_+	PRK06256, PRK06256, biotin synthase; Validated	NA|372aa|down_6|NZ_LT992475.1_2789200_2790316_+	COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]	NA|231aa|down_7|NZ_LT992475.1_2790326_2791019_+	COG1424, BioW, Pimeloyl-CoA synthetase [Coenzyme metabolism]	NA|156aa|down_8|NZ_LT992475.1_2791029_2791497_+	pfam06177, QueT, QueT transporter	NA|326aa|down_9|NZ_LT992475.1_2791548_2792526_-	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin
