The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	314	28277	2910878	terminase,integrase	Staphylococcus_phage(93.48%)	47	10558:10572	23301:23315
WP_031867414.1|314_2006_-|terminase	terminase large subunit	terminase	A0A2I6PE44	Staphylococcus_phage	98.8	0.0e+00
WP_000778933.1|1995_2301_-|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
WP_000160693.1|2428_2743_-	HNH endonuclease	NA	A0A2I6PF37	Staphylococcus_phage	100.0	2.5e-56
WP_000528512.1|2899_3337_-	transcriptional regulator	NA	A0A2I6PEN3	Staphylococcus_phage	100.0	7.9e-77
WP_078067912.1|3349_4717_-	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	99.6	8.7e-263
WP_001794602.1|4697_4988_-	VRR-NUC domain-containing protein	NA	M1T308	Staphylococcus_phage	100.0	4.9e-51
WP_001801650.1|5121_5220_+	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	3.7e-11
WP_114621443.1|5328_7776_-	virulence-associated E family protein	NA	M9QQL2	Staphylococcus_phage	99.4	0.0e+00
WP_015986198.1|7827_8028_-	DUF1514 family protein	NA	A7TWI3	Staphylococcus_phage	100.0	6.5e-26
WP_000595260.1|8095_8248_-	transcriptional activator RinB	NA	A7TWI2	Staphylococcus_phage	100.0	2.6e-19
WP_001596346.1|8244_8634_-	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	100.0	3.6e-65
WP_000608283.1|8623_8860_-	hypothetical protein	NA	A7TWI0	Staphylococcus_phage	100.0	3.6e-36
WP_000141259.1|8852_9056_-	hypothetical protein	NA	A7TWH9	Staphylococcus_phage	100.0	8.8e-31
WP_015977976.1|9052_9259_-	DUF1381 domain-containing protein	NA	A7TWH8	Staphylococcus_phage	100.0	9.9e-30
WP_001066452.1|9295_9832_-	dUTP diphosphatase	NA	A0A1W6JPM9	Staphylococcus_phage	100.0	1.2e-95
WP_000714407.1|9824_9995_-	hypothetical protein	NA	A0A1W6JQ22	Staphylococcus_phage	100.0	5.7e-23
WP_031920844.1|9981_10233_-	DUF1024 family protein	NA	A7TWH5	Staphylococcus_phage	96.4	6.6e-36
WP_015986194.1|10225_10534_-	hypothetical protein	NA	A7TWH4	Staphylococcus_phage	100.0	1.2e-50
WP_114621444.1|10530_10878_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	99.1	8.5e-58
10558:10572	attL	ATTTTCAAAAATATT	NA	NA	NA	NA
WP_000695759.1|10874_11276_-	hypothetical protein	NA	A0A0N7E0T5	Staphylococcus_phage	100.0	7.0e-72
WP_015986193.1|11288_11537_-	hypothetical protein	NA	A7TWH1	Staphylococcus_phage	100.0	8.0e-42
WP_015986192.1|11545_11746_-	hypothetical protein	NA	A7TWH0	Staphylococcus_phage	100.0	5.6e-30
WP_015984497.1|11748_12006_-	DUF3310 domain-containing protein	NA	A7TWG9	Staphylococcus_phage	100.0	3.4e-43
WP_000113977.1|12005_12407_-	PVL family protein	NA	A7TWG8	Staphylococcus_phage	100.0	9.5e-69
WP_114621445.1|12406_12592_-	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	98.4	1.6e-26
WP_078100013.1|12604_14557_-	DNA polymerase	NA	A0A2K9VBT3	Staphylococcus_phage	98.9	0.0e+00
WP_000647288.1|14625_15180_-	DUF2815 family protein	NA	M9QRS1	Staphylococcus_phage	100.0	1.4e-99
WP_114621446.1|15206_16373_-	DUF2800 domain-containing protein	NA	A0A0K1LKE3	Staphylococcus_phage	99.2	4.5e-220
WP_000985976.1|16369_16732_-	hypothetical protein	NA	A0A2I6PF03	Staphylococcus_phage	100.0	4.9e-56
WP_000174994.1|16746_17070_-	hypothetical protein	NA	A0A2I6PF12	Staphylococcus_phage	100.0	5.9e-53
WP_001285963.1|17148_17310_-	DUF1270 family protein	NA	A0A2I6PEZ9	Staphylococcus_phage	100.0	5.0e-21
WP_001124190.1|17322_17586_-	helix-turn-helix domain-containing protein	NA	A0A2I6PDM6	Staphylococcus_phage	100.0	1.1e-44
WP_001036302.1|17610_17826_-	hypothetical protein	NA	A0A2I6PDN5	Staphylococcus_phage	100.0	1.3e-32
WP_000549549.1|17881_18112_+	hypothetical protein	NA	A0A2I6PE22	Staphylococcus_phage	97.4	1.8e-35
WP_001001358.1|18108_18285_-	hypothetical protein	NA	B7T0F9	Staphylococcus_virus	98.3	1.3e-25
WP_001115060.1|18373_18565_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PEL6	Staphylococcus_phage	100.0	2.3e-28
WP_000429766.1|18725_19055_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PEN2	Staphylococcus_phage	100.0	3.2e-54
WP_000524999.1|19067_19529_+	hypothetical protein	NA	A0A2I6PEK4	Staphylococcus_phage	98.7	3.7e-85
WP_000755721.1|19546_19981_+	hypothetical protein	NA	A0A2I6PEM0	Staphylococcus_phage	100.0	1.2e-24
WP_000449657.1|20009_20405_+	hypothetical protein	NA	A0A2I6PEJ7	Staphylococcus_phage	99.2	1.1e-69
WP_001013104.1|20494_20641_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_114621447.1|20637_21252_-	ATPase	NA	A7TW88	Staphylococcus_phage	99.0	7.4e-105
WP_031886769.1|21377_22583_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	99.5	4.2e-221
WP_016187433.1|22625_24653_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	94.8	1.0e-110
23301:23315	attR	AATATTTTTGAAAAT	NA	NA	NA	NA
WP_001825329.1|24645_25575_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000987760.1|25819_27571_-	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.3	1.3e-21
WP_000064078.1|27551_28277_-	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 2
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	83399	91711	2910878	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|83399_84185_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924214.1|84310_85201_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062170.1|85210_86557_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	3.4e-54
WP_000683941.1|86670_87771_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	1.0e-08
WP_000624563.1|87773_88451_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|88581_89688_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217255.1|89911_91711_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.5e-54
>prophage 3
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	161135	170178	2910878	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|161135_161654_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595008.1|161675_163949_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	2.1e-64
WP_000749801.1|164151_166431_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|166705_166966_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|166984_168124_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019177.1|168146_169172_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005766.1|169173_170178_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 4
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	293541	341387	2910878	protease,tRNA,transposase	Staphylococcus_phage(91.89%)	47	NA	NA
WP_001050515.1|293541_300090_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	95.1	5.7e-296
WP_000836471.1|300413_300725_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	95.1	1.3e-49
WP_001807819.1|300746_303164_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.1	0.0e+00
WP_001025064.1|303451_304633_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	9.6e-218
WP_000526541.1|304742_305696_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	99.3	6.4e-79
WP_000764426.1|305692_306256_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	95.7	7.3e-99
WP_000757543.1|306374_306776_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|307348_308176_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014937042.1|308178_308298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|308409_309411_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008555.1|309538_309997_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	97.4	4.1e-68
WP_001159034.1|310009_311191_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	1.9e-226
WP_000493892.1|311201_311834_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_000077346.1|311840_312884_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.1	3.1e-196
WP_001261672.1|313364_314867_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	5.0e-30
WP_000221190.1|315509_315824_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	1.3e-52
WP_000989103.1|315823_317116_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	94.7	7.5e-216
WP_001032832.1|317202_318057_-	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|318332_318557_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671058.1|318755_319226_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	84.6	5.0e-69
WP_001153741.1|319338_319782_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030474.1|319768_320212_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	77.9	1.4e-49
WP_001168915.1|320509_321145_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000492903.1|321311_321932_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001096494.1|322494_323208_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091443.1|323466_323769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200546.1|324023_324389_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	98.3	6.9e-58
WP_000623484.1|324385_324739_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	82.1	2.3e-18
WP_000453302.1|324988_325822_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.9	1.7e-157
WP_000366160.1|326033_326942_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.3	1.3e-137
WP_000933822.1|327066_328260_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109913.1|328631_330224_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.6	0.0e+00
WP_016187361.1|330520_331267_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.0	7.8e-141
WP_000672013.1|331271_331745_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|331810_332068_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778553.1|332064_333066_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	86.5	3.3e-163
WP_000348381.1|333070_334549_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	95.5	6.7e-277
WP_016187363.1|334707_335163_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	96.6	8.3e-77
WP_001825423.1|335465_336128_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	87.7	2.8e-49
WP_000070644.1|336208_337204_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	94.8	1.3e-69
WP_000669036.1|337279_337906_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	84.1	9.9e-81
WP_000627549.1|337946_338291_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	96.5	5.1e-55
WP_000414230.1|338388_338961_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	3.5e-24
WP_000864133.1|339158_339716_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	98.1	1.1e-78
WP_000375476.1|340086_340263_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000070813.1|340273_340657_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000196442.1|341105_341387_-|transposase	IS3 family transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	63.4	3.2e-23
>prophage 5
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	431192	480171	2910878	protease,plate,tail,holin,integrase,tRNA,transposase	Staphylococcus_phage(47.62%)	45	462279:462294	470391:470406
WP_000545368.1|431192_432620_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_000027924.1|432632_434090_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_000170162.1|434091_434394_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957030.1|434760_436299_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831695.1|436387_437587_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774571.1|437599_439603_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	4.4e-114
WP_000992924.1|439606_441799_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272065.1|441795_442488_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|442659_442962_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|443070_444366_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827738.1|445214_446381_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434536.1|446411_446735_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669861.1|447027_447201_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|447181_447784_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040870.1|448053_448875_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	53.1	6.1e-70
WP_000284428.1|448867_450337_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	44.9	1.7e-107
WP_000897642.1|450520_451597_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177819.1|451616_452411_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|452482_452590_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323172.1|452600_454163_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275718.1|454367_455465_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
WP_000149686.1|455836_456397_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|456449_457379_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001826057.1|457571_457745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021224.1|457796_459176_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181321.1|459295_460324_-	lactonase family protein	NA	NA	NA	NA	NA
WP_001284658.1|460783_461164_-	penicillinase repressor BlaI	NA	NA	NA	NA	NA
WP_001096367.1|461153_462911_-	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA	NA
462279:462294	attL	AGTATCTCTGTTTTTA	NA	NA	NA	NA
WP_000733622.1|463017_463863_+	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	A0A1B0VBP7	Salmonella_phage	33.9	4.4e-31
WP_000612779.1|464176_464587_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	53.5	3.1e-30
WP_162804599.1|464629_466000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000410574.1|466004_466370_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000026850.1|466378_468442_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_043854724.1|469164_469581_-	hypothetical protein	NA	M9QRV7	Staphylococcus_phage	99.3	5.4e-75
WP_000455173.1|469552_470080_-	DUF4065 domain-containing protein	NA	M9QX37	Staphylococcus_phage	100.0	3.4e-98
WP_000201920.1|470101_470281_-	hypothetical protein	NA	M9QYR8	Staphylococcus_phage	100.0	4.1e-24
WP_031776074.1|471183_472629_-	SH3 domain-containing protein	NA	Q4ZB16	Staphylococcus_virus	96.7	1.1e-287
470391:470406	attR	AGTATCTCTGTTTTTA	NA	NA	NA	NA
WP_000354117.1|472609_473047_-|holin	phage holin	holin	M9QTA6	Staphylococcus_phage	97.9	3.8e-71
WP_000466774.1|473182_473482_-	DUF2951 family protein	NA	M9QRV2	Staphylococcus_phage	100.0	2.6e-31
WP_000916022.1|473527_473692_-	XkdX family protein	NA	M9QX31	Staphylococcus_phage	98.1	1.9e-23
WP_001166606.1|473684_474074_-	DUF2977 domain-containing protein	NA	Q4ZCZ7	Staphylococcus_virus	95.3	5.4e-61
WP_114621453.1|474073_475540_-|plate	phage baseplate upper protein	plate	A0A2I6PE72	Staphylococcus_phage	98.6	1.7e-269
WP_000429556.1|475539_477450_-	hypothetical protein	NA	A0A2I6PF35	Staphylococcus_phage	99.2	0.0e+00
WP_000384460.1|477754_479338_-|tail	phage tail protein	tail	Q4ZD01	Staphylococcus_virus	99.8	3.5e-308
WP_031775783.1|479346_480171_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	99.6	7.0e-159
>prophage 6
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	491613	585221	2910878	protease,capsid,portal,terminase,tail,holin,head,integrase	Staphylococcus_phage(86.73%)	132	549645:549662	575084:575101
WP_001100664.1|491613_492852_-|portal	phage portal protein	portal	A0A2I6PER5	Staphylococcus_phage	100.0	6.9e-235
WP_000778933.1|494536_494842_-|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
WP_000160693.1|494969_495284_-	HNH endonuclease	NA	A0A2I6PF37	Staphylococcus_phage	100.0	2.5e-56
WP_000528512.1|495440_495878_-	transcriptional regulator	NA	A0A2I6PEN3	Staphylococcus_phage	100.0	7.9e-77
WP_078092588.1|497659_497758_+	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	96.9	3.1e-10
WP_031863773.1|497866_500314_-	virulence-associated E family protein	NA	Q4ZCN2	Staphylococcus_virus	98.7	0.0e+00
WP_031794940.1|500365_500566_-	DUF1514 family protein	NA	A0A2I6PF41	Staphylococcus_phage	98.5	3.8e-26
WP_031905586.1|500633_500786_-	transcriptional regulator	NA	A7TWI2	Staphylococcus_phage	100.0	8.4e-18
WP_000592221.1|500782_501169_-	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	100.0	1.0e-64
WP_000195803.1|501165_501372_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_015977658.1|501408_501969_-	dUTP diphosphatase	NA	Q4ZA39	Staphylococcus_virus	100.0	2.4e-102
WP_031794954.1|501961_502210_-	DUF1024 family protein	NA	C8CH04	Staphylococcus_phage	97.6	2.7e-37
WP_001105602.1|502202_502568_-	hypothetical protein	NA	A0A0F6N3K4	Staphylococcus_phage	97.3	7.4e-52
WP_000982714.1|502564_503002_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000983950.1|502998_503193_-	hypothetical protein	NA	A0A0U2A067	Staphylococcus_phage	96.8	1.4e-25
WP_000695771.1|503189_503597_-	hypothetical protein	NA	M9NST1	Staphylococcus_phage	98.5	2.6e-74
WP_000693989.1|503599_503806_-	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	100.0	3.0e-34
WP_015986193.1|503819_504068_-	hypothetical protein	NA	A7TWH1	Staphylococcus_phage	100.0	8.0e-42
WP_114621481.1|504206_506159_-	DNA polymerase	NA	M9QT72	Staphylococcus_phage	99.1	0.0e+00
WP_000647288.1|506227_506782_-	DUF2815 family protein	NA	M9QRS1	Staphylococcus_phage	100.0	1.4e-99
WP_031794951.1|506808_507975_-	DUF2800 domain-containing protein	NA	Q8SDR9	Staphylococcus_virus	99.0	6.5e-219
WP_000985976.1|507971_508334_-	hypothetical protein	NA	A0A2I6PF03	Staphylococcus_phage	100.0	4.9e-56
WP_000174994.1|508348_508672_-	hypothetical protein	NA	A0A2I6PF12	Staphylococcus_phage	100.0	5.9e-53
WP_001285948.1|508751_508913_-	DUF1270 domain-containing protein	NA	A9CR58	Staphylococcus_phage	98.1	1.1e-20
WP_001596347.1|508925_509189_-	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	98.9	2.5e-46
WP_001097552.1|509215_509431_-	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001128433.1|509485_509851_+	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001025401.1|509819_510065_-	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_000773059.1|510131_510512_+	DUF2513 domain-containing protein	NA	Q4ZCQ5	Staphylococcus_virus	100.0	5.8e-68
WP_001148860.1|510498_510696_-	hypothetical protein	NA	A7TWF5	Staphylococcus_phage	100.0	4.6e-24
WP_000362644.1|510765_510978_+	hypothetical protein	NA	D2JGJ1	Staphylococcus_phage	100.0	7.6e-33
WP_000771849.1|511018_511168_-	hypothetical protein	NA	D2JGJ0	Staphylococcus_phage	100.0	1.4e-20
WP_000435357.1|511182_511626_-	hypothetical protein	NA	A7TWF2	Staphylococcus_phage	100.0	8.9e-76
WP_000333485.1|511643_511868_-	DUF739 family protein	NA	A0A2I6PE94	Staphylococcus_phage	100.0	2.7e-36
WP_001089477.1|512029_512410_+	helix-turn-helix domain-containing protein	NA	A0A2I6PE55	Staphylococcus_phage	99.2	1.5e-63
WP_001558059.1|512431_512890_+	hypothetical protein	NA	B2ZYU2	Staphylococcus_phage	99.3	3.5e-83
WP_000755718.1|512907_513342_+	hypothetical protein	NA	A0A2I6PEM0	Staphylococcus_phage	100.0	1.2e-24
WP_001558060.1|513370_513766_+	hypothetical protein	NA	I1W601	Staphylococcus_phage	100.0	1.4e-69
WP_001013104.1|513855_514002_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_031863779.1|513998_514613_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	97.5	8.2e-104
WP_000264751.1|514738_515944_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
WP_000267034.1|517222_517396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188070.1|517846_518887_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713062.1|518943_519786_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033968.1|519782_520340_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966291.1|520399_520924_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|521044_521608_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221650.1|521671_522412_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763048.1|522411_523284_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_000645735.1|523280_523961_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991294.1|523961_524858_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.7	6.5e-17
WP_000691584.1|524854_525235_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681966.1|525492_525669_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|525910_526009_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068535.1|526208_527495_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000669725.1|527765_529835_-	extracellular adherence protein Eap/Map	NA	NA	NA	NA	NA
WP_000669789.1|530792_530972_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|531282_531543_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|531595_531946_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_000727649.1|532630_533080_+	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_000919350.1|534159_534651_-	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_000861038.1|534841_535597_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|535608_535863_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_001791821.1|535914_536022_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|536074_536251_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000539688.1|536400_536697_-	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_001040261.1|536754_537042_-	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_001153681.1|537088_537241_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_114621458.1|537230_541016_-	hypothetical protein	NA	C8CH32	Staphylococcus_phage	99.4	0.0e+00
WP_114621459.1|541031_542516_-|tail	phage tail family protein	tail	A0A2I6PDJ0	Staphylococcus_phage	98.6	3.5e-294
WP_114621460.1|542512_547042_-|tail	phage tail tape measure protein	tail	W5R8I2	Staphylococcus_phage	91.7	0.0e+00
WP_001549167.1|547098_547236_-	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_001096353.1|547286_547637_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	99.1	3.0e-58
WP_114621461.1|547686_547992_-	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	94.6	1.5e-29
WP_000985141.1|547952_548594_-|tail	phage tail protein	tail	A0A1W6JPP5	Staphylococcus_phage	100.0	1.1e-119
WP_000565498.1|548594_549002_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114341.1|548998_549403_-	HK97 gp10 family phage protein	NA	A0A1W6JPJ1	Staphylococcus_phage	100.0	2.5e-69
WP_000755150.1|549399_549762_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
549645:549662	attL	ATAATTTTTCTTCTTTTT	NA	NA	NA	NA
WP_000150936.1|549745_550030_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238240.1|550019_550304_-	hypothetical protein	NA	A0A1W6JPL8	Staphylococcus_phage	100.0	2.3e-45
WP_000154567.1|550323_551469_-|capsid	phage major capsid protein	capsid	A0A1W6JPL4	Staphylococcus_phage	100.0	1.9e-215
WP_000861911.1|551491_552229_-|protease	Clp protease ClpP	protease	A0A1W6JPK0	Staphylococcus_phage	100.0	1.8e-129
WP_000025268.1|552212_553376_-|portal	phage portal protein	portal	A0A1W6JPQ9	Staphylococcus_phage	100.0	1.8e-216
WP_000625087.1|553391_555053_-|terminase	terminase large subunit	terminase	Q8LTH3	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|555049_555394_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_031926201.1|555524_555824_-	HNH endonuclease	NA	A0A2I6PDH9	Staphylococcus_phage	99.0	1.0e-51
WP_000590122.1|556055_556472_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_001794311.1|556499_556700_-	DUF1514 family protein	NA	D2JLD9	Staphylococcus_phage	100.0	1.4e-28
WP_000595265.1|557507_557657_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_001555739.1|557656_558043_-	hypothetical protein	NA	A0A2I6PDC1	Staphylococcus_phage	100.0	3.0e-64
WP_000608273.1|558032_558269_-	hypothetical protein	NA	S4SWB7	Staphylococcus_phage	100.0	1.6e-36
WP_001072795.1|558261_558465_-	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
WP_000132920.1|558461_558656_-	hypothetical protein	NA	S4SX95	Staphylococcus_phage	100.0	7.9e-29
WP_000195779.1|558652_558859_-	DUF1381 domain-containing protein	NA	A0A1W6JPM8	Staphylococcus_phage	100.0	4.9e-21
WP_001209216.1|558875_559049_-	hypothetical protein	NA	A0A1W6JQ45	Staphylococcus_phage	100.0	4.7e-25
WP_000185680.1|559085_559622_-	dUTP diphosphatase	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
WP_114621462.1|559614_559863_-	DUF1024 family protein	NA	A0A0H4IP74	Staphylococcus_phage	98.8	1.2e-37
WP_001813803.1|559855_560023_-	hypothetical protein	NA	A0A2I6PF20	Staphylococcus_phage	100.0	3.5e-25
WP_042905000.1|560034_560283_-	phage protein	NA	A0A2I6PDI0	Staphylococcus_phage	96.3	1.0e-41
WP_114621463.1|560283_560655_-	hypothetical protein	NA	A7TWA7	Staphylococcus_phage	96.7	2.7e-54
WP_000401960.1|560667_561072_-	RusA family crossover junction endodeoxyribonuclease	NA	A0EWX6	Staphylococcus_phage	100.0	1.9e-72
WP_000338530.1|561080_561299_-	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
WP_000148300.1|561305_562190_-	DnaD domain protein	NA	S4V6D4	Staphylococcus_phage	96.6	1.9e-138
WP_000934759.1|562219_562690_-	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_071621397.1|562690_563308_-	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.1e-87
WP_000138475.1|563388_564309_-	recombinase RecT	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
WP_031928235.1|564310_566254_-	AAA family ATPase	NA	A0A1P8L6F1	Staphylococcus_phage	92.6	0.0e+00
WP_001205732.1|566262_566526_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_031807558.1|566534_566795_-	DUF1108 family protein	NA	A0A0H3U2T6	Staphylococcus_phage	95.3	3.2e-41
WP_031807559.1|566798_567101_-	DUF2482 family protein	NA	A1KWZ5	Staphylococcus_virus	63.6	1.2e-26
WP_000066014.1|567193_567355_-	DUF1270 domain-containing protein	NA	Q4ZAZ7	Staphylococcus_virus	98.1	9.5e-20
WP_001120935.1|567351_567672_-	DUF771 domain-containing protein	NA	Q4ZDR7	Staphylococcus_virus	100.0	1.5e-56
WP_000801108.1|567730_567958_+	hypothetical protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
WP_000389905.1|567959_568151_-	hypothetical protein	NA	Q4ZDR9	Staphylococcus_virus	100.0	2.1e-26
WP_000768245.1|568200_568557_+	DUF2513 domain-containing protein	NA	A0A1P8L6H1	Staphylococcus_phage	100.0	6.1e-59
WP_001566738.1|568551_568746_-	hypothetical protein	NA	Q4ZDS1	Staphylococcus_virus	100.0	1.0e-23
WP_031763800.1|568762_569551_-	phage antirepressor KilAC domain-containing protein	NA	R9QSV3	Staphylococcus_phage	99.6	2.7e-144
WP_000192116.1|569573_569801_-	helix-turn-helix transcriptional regulator	NA	Q4ZB05	Staphylococcus_virus	98.7	3.5e-36
WP_114621464.1|569954_570587_+	helix-turn-helix domain-containing protein	NA	Q4ZB06	Staphylococcus_virus	90.0	4.2e-103
WP_000837517.1|570768_571467_+	potassium channel family protein	NA	A0A1B0Y2S3	Lactobacillus_phage	29.8	4.4e-13
WP_000705238.1|571622_571790_+	hypothetical protein	NA	Q4ZDJ4	Staphylococcus_virus	100.0	1.7e-24
WP_000440838.1|571929_572634_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	100.0	4.6e-127
WP_001814397.1|572826_573864_+|integrase	site-specific integrase	integrase	A0A1X9H022	Staphylococcus_phage	99.1	6.5e-178
WP_000595612.1|575006_576023_-	leukocidin/hemolysin toxin family protein	NA	A0A2I6PER8	Staphylococcus_phage	29.3	1.1e-25
575084:575101	attR	ATAATTTTTCTTCTTTTT	NA	NA	NA	NA
WP_000791397.1|576044_577100_-	leukocidin/hemolysin toxin family protein	NA	A0A2I6PER8	Staphylococcus_phage	35.4	8.7e-37
WP_000206618.1|577531_578755_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_001045074.1|579137_580445_+	potassium transporter KtrB	NA	NA	NA	NA	NA
WP_000216896.1|580983_581610_-	hypothetical protein	NA	C8CH40	Staphylococcus_phage	44.5	2.4e-42
WP_000201398.1|581606_581786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000240642.1|582326_583943_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|584018_584303_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000197638.1|584477_585221_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 7
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	1741080	1752925	2910878	integrase	Staphylococcus_phage(33.33%)	14	1744102:1744122	1757607:1757627
WP_000264071.1|1741080_1742547_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
WP_000424968.1|1742571_1744113_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
1744102:1744122	attL	GAGTGGGAATAATTATATATA	NA	NA	NA	NA
WP_000592970.1|1744206_1745343_-|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	42.5	1.7e-75
WP_000819103.1|1745426_1746212_-	helix-turn-helix transcriptional regulator	NA	A0A1S5S8T5	Streptococcus_phage	58.6	1.2e-09
WP_000494396.1|1746328_1746556_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000080597.1|1746601_1746862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000773833.1|1746908_1747055_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058503.1|1747047_1747272_+	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	61.8	3.0e-16
WP_001103964.1|1747272_1747572_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	76.8	1.1e-37
WP_000985238.1|1747662_1750026_+	primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	39.2	4.4e-137
WP_001081424.1|1750447_1750792_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	65.2	9.4e-41
WP_000884055.1|1751016_1751223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000657541.1|1751209_1752268_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000253082.1|1752433_1752925_+	hypothetical protein	NA	A0A2H4JB26	uncultured_Caudovirales_phage	39.2	6.7e-24
1757607:1757627	attR	GAGTGGGAATAATTATATATA	NA	NA	NA	NA
>prophage 8
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	2083714	2091534	2910878		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|2083714_2084770_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|2084769_2085456_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037805.1|2085430_2085904_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093559.1|2086244_2086685_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637685.1|2086965_2087550_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062967.1|2087648_2088362_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	5.0e-52
WP_000941336.1|2088365_2088785_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|2088786_2089455_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604516.1|2089805_2090399_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	3.1e-39
WP_001217786.1|2090382_2091534_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
>prophage 9
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	2103504	2117820	2910878		uncultured_Caudovirales_phage(50.0%)	13	NA	NA
WP_000663034.1|2103504_2104563_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	26.9	1.5e-20
WP_000197271.1|2104721_2105264_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429003.1|2106000_2106918_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.8e-07
WP_014936998.1|2107008_2107116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193750.1|2107187_2108693_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930016.1|2109032_2109533_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	66.2	2.7e-52
WP_001068490.1|2109552_2110419_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|2111220_2111619_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|2111581_2113687_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|2113806_2114778_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000876311.1|2115147_2116119_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	80.2	7.8e-141
WP_001245567.1|2116105_2117062_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.6e-05
WP_000616865.1|2117058_2117820_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.1	7.2e-17
>prophage 10
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	2205210	2249769	2910878	capsid,portal,terminase,plate,head,tail,holin,integrase	Staphylococcus_phage(72.31%)	69	2200071:2200086	2256510:2256525
2200071:2200086	attL	AAAGAATTACCAAAAG	NA	NA	NA	NA
WP_001825559.1|2205210_2206461_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	8.3e-111
WP_001010508.1|2206450_2206915_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_001074405.1|2207065_2208463_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_001145730.1|2208530_2209580_-|integrase	site-specific integrase	integrase	A0A0H4ISP4	Staphylococcus_phage	100.0	2.7e-203
WP_016187262.1|2209646_2209889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021285964.1|2209899_2210883_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000142628.1|2210934_2211609_-	LexA family transcriptional regulator	NA	A0A1W6JPS3	Staphylococcus_phage	92.0	2.3e-115
WP_016187264.1|2211800_2212040_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J3I3	uncultured_Caudovirales_phage	88.6	9.4e-32
WP_001153175.1|2212054_2212216_+	hypothetical protein	NA	Q4ZBN4	Staphylococcus_phage	100.0	1.9e-20
WP_021285963.1|2212208_2212445_-	hypothetical protein	NA	Q4ZBN3	Staphylococcus_phage	97.4	8.7e-38
WP_001576117.1|2212509_2213250_+	phage antirepressor KilAC domain-containing protein	NA	Q8SDM9	Staphylococcus_phage	99.6	1.8e-134
WP_001555746.1|2213274_2213490_+	hypothetical protein	NA	E9LT76	Staphylococcus_phage	98.6	5.0e-32
WP_000977381.1|2213761_2213983_+	hypothetical protein	NA	A0A0F6N3I2	Staphylococcus_phage	100.0	1.5e-31
WP_000048124.1|2213975_2214137_+	DUF1270 family protein	NA	C7F7L3	Staphylococcus_phage	100.0	1.9e-20
WP_000163429.1|2214239_2214542_+	DUF2482 family protein	NA	A0A0K1LKL3	Staphylococcus_phage	100.0	2.6e-47
WP_021285962.1|2214546_2214807_+	DUF1108 family protein	NA	Q9MBS4	Staphylococcus_prophage	98.8	2.0e-43
WP_016187438.1|2214821_2215301_+	siphovirus Gp157 family protein	NA	Q9MBS3	Staphylococcus_prophage	97.5	3.4e-81
WP_001043063.1|2215300_2215939_+	ERF family protein	NA	Q9MBS2	Staphylococcus_prophage	100.0	1.7e-115
WP_016187439.1|2215938_2216367_+	single-stranded DNA-binding protein	NA	A0A2H4JHI1	uncultured_Caudovirales_phage	98.6	2.5e-59
WP_015980404.1|2216380_2217076_+	hypothetical protein	NA	Q9MBS0	Staphylococcus_prophage	100.0	2.3e-134
WP_000504986.1|2217047_2217851_+	phage replisome organizer N-terminal domain-containing protein	NA	Q9MBR9	Staphylococcus_prophage	100.0	1.5e-121
WP_000803049.1|2217860_2218634_+	ATP-binding protein	NA	C5I645	Staphylococcus_phage	99.6	3.0e-143
WP_000237154.1|2218627_2218789_+	hypothetical protein	NA	A0A0H4IU12	Staphylococcus_phage	100.0	1.0e-21
WP_001123688.1|2218801_2219023_+	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	100.0	1.3e-35
WP_000049794.1|2219032_2219437_+	DUF1064 domain-containing protein	NA	A1KX76	Staphylococcus_virus	100.0	9.6e-69
WP_001187243.1|2219441_2219627_+	DUF3113 family protein	NA	A0A0F6N3K7	Staphylococcus_phage	100.0	1.1e-27
WP_000101252.1|2219627_2219933_+	hypothetical protein	NA	A0A0F6N4H9	Staphylococcus_phage	100.0	1.7e-49
WP_016187441.1|2220060_2220420_+	hypothetical protein	NA	Q8SDV7	Staphylococcus_phage	98.3	2.9e-61
WP_021285960.1|2220419_2220677_+	DUF3310 domain-containing protein	NA	A0A2I6PEN5	Staphylococcus_phage	97.6	1.7e-42
WP_000224767.1|2220679_2220880_+	hypothetical protein	NA	B7T0H2	Staphylococcus_virus	97.0	1.4e-28
WP_000097190.1|2220876_2221566_+	N-6 DNA methylase	NA	B7T0H3	Staphylococcus_virus	98.7	2.0e-130
WP_000695732.1|2221579_2221792_+	hypothetical protein	NA	A0A2I6PDB7	Staphylococcus_phage	89.6	3.0e-29
WP_021285959.1|2222191_2222383_+	hypothetical protein	NA	Q4ZBT5	Staphylococcus_virus	95.2	6.2e-26
WP_025176536.1|2222745_2222994_+	DUF1024 family protein	NA	Q9MBR1	Staphylococcus_prophage	97.6	1.6e-37
WP_000185693.1|2222986_2223523_+	dUTP diphosphatase	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_000195770.1|2223559_2223766_+	DUF1381 domain-containing protein	NA	B7T0C2	Staphylococcus_virus	95.6	6.0e-19
WP_016187270.1|2223762_2223966_+	hypothetical protein	NA	B2ZYX5	Staphylococcus_phage	92.5	6.3e-29
WP_025176537.1|2223958_2224132_+	transcriptional regulator	NA	Q4ZBK0	Staphylococcus_phage	98.2	2.4e-21
WP_000989998.1|2224132_2224279_+	hypothetical protein	NA	A0A059T5A8	Staphylococcus_phage	100.0	2.2e-15
WP_000162701.1|2224302_2224725_+	RinA family phage transcriptional activator	NA	A0A0F6N3E5	Staphylococcus_phage	100.0	1.2e-74
WP_000594088.1|2225055_2225550_+|terminase	terminase small subunit	terminase	A0A0N9BAX3	Staphylococcus_phage	100.0	3.4e-84
WP_001037578.1|2225542_2226766_+|terminase	PBSX family phage terminase large subunit	terminase	A0A0N9BAX9	Staphylococcus_phage	100.0	7.5e-242
WP_016187272.1|2226762_2228187_+|portal	phage portal protein	portal	M9NS48	Staphylococcus_phage	100.0	7.4e-273
WP_000184140.1|2228155_2229106_+|head	phage head morphogenesis protein	head	M9NST7	Staphylococcus_phage	100.0	2.3e-177
WP_000440857.1|2229109_2229343_+	hypothetical protein	NA	M9NUJ2	Staphylococcus_phage	100.0	2.5e-37
WP_016187273.1|2229446_2230031_+	DUF4355 domain-containing protein	NA	M9NRJ1	Staphylococcus_phage	100.0	9.0e-76
WP_016187274.1|2230047_2230962_+|capsid	phage major capsid protein	capsid	M9NTC2	Staphylococcus_phage	100.0	3.4e-170
WP_000002930.1|2230973_2231117_+	hypothetical protein	NA	A0A059T673	Staphylococcus_phage	100.0	7.9e-18
WP_016187275.1|2231122_2231473_+	hypothetical protein	NA	M9NST9	Staphylococcus_phage	100.0	1.4e-60
WP_021285837.1|2231484_2231820_+|head	phage head closure protein	head	M9NUJ3	Staphylococcus_phage	100.0	3.9e-60
WP_021285836.1|2231806_2232214_+	HK97 gp10 family phage protein	NA	A0A059T7Q2	Staphylococcus_phage	97.0	2.5e-72
WP_016187278.1|2232226_2232652_+	DUF3168 domain-containing protein	NA	M9NTC5	Staphylococcus_phage	100.0	1.6e-74
WP_000057585.1|2232652_2233210_+	hypothetical protein	NA	A0A059T675	Staphylococcus_phage	100.0	4.1e-102
WP_000134336.1|2233276_2233789_+	hypothetical protein	NA	A0A059T5B1	Staphylococcus_phage	100.0	5.4e-93
WP_025176538.1|2233833_2234118_+	hypothetical protein	NA	A0A059T626	Staphylococcus_phage	96.8	1.2e-44
WP_021285835.1|2234121_2237007_+|terminase	terminase	terminase	M9NRJ5	Staphylococcus_phage	100.0	0.0e+00
WP_021285834.1|2237021_2237963_+|tail	phage tail family protein	tail	Q4ZBQ4	Staphylococcus_phage	99.0	2.6e-181
WP_016187282.1|2237973_2239860_+|tail	phage tail protein	tail	M9NS58	Staphylococcus_phage	100.0	0.0e+00
WP_016187283.1|2239872_2241771_+	hypothetical protein	NA	M9NSU3	Staphylococcus_phage	100.0	0.0e+00
WP_016187284.1|2241770_2243594_+|plate	BppU family phage baseplate upper protein	plate	M9NUJ5	Staphylococcus_phage	100.0	1.5e-299
WP_016187285.1|2243593_2243971_+	DUF2977 domain-containing protein	NA	M9NRJ7	Staphylococcus_phage	100.0	1.1e-61
WP_001800921.1|2243980_2244154_+	XkdX family protein	NA	A0A059T7K6	Staphylococcus_phage	100.0	1.3e-27
WP_021285833.1|2244194_2244494_+	DUF2951 family protein	NA	B7T0E7	Staphylococcus_virus	89.9	3.1e-40
WP_016187457.1|2244630_2246505_+	glucosaminidase domain-containing protein	NA	Q4ZBX1	Staphylococcus_virus	96.5	0.0e+00
WP_016187459.1|2246987_2247242_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	98.8	1.2e-40
WP_016187460.1|2247253_2248009_+	CHAP domain-containing protein	NA	Q4ZCZ2	Staphylococcus_virus	98.8	1.7e-151
WP_000201920.1|2248652_2248832_+	hypothetical protein	NA	M9QYR8	Staphylococcus_phage	100.0	4.1e-24
WP_000455172.1|2248853_2249381_+	DUF4065 domain-containing protein	NA	M9QX37	Staphylococcus_phage	99.4	1.3e-97
WP_043854724.1|2249352_2249769_+	hypothetical protein	NA	M9QRV7	Staphylococcus_phage	99.3	5.4e-75
2256510:2256525	attR	AAAGAATTACCAAAAG	NA	NA	NA	NA
>prophage 11
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	2298995	2322220	2910878	integrase	Streptococcus_phage(94.74%)	23	2287452:2287469	2326495:2326512
2287452:2287469	attL	GCGGGGCCCCAACACAGA	NA	NA	NA	NA
WP_000154905.1|2298995_2302649_+	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.7	7.0e-25
WP_000670757.1|2302814_2303717_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_000902814.1|2304043_2304433_+	YisL family protein	NA	NA	NA	NA	NA
WP_001291561.1|2304697_2305915_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000814511.1|2305996_2306200_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_000857133.1|2306660_2306891_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|2306887_2307310_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_001227347.1|2307814_2308168_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000336323.1|2308227_2308395_-	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_000691736.1|2308513_2310433_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.5	0.0e+00
WP_001814923.1|2310448_2310565_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224318.1|2310809_2311742_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_000769868.1|2311738_2312740_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_000804748.1|2312736_2314914_-	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000331163.1|2314916_2317364_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	99.9	0.0e+00
WP_000506270.1|2317347_2317854_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|2317828_2318326_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|2318442_2318664_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398286.1|2318706_2319912_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	99.8	1.1e-232
WP_031764745.1|2319934_2320087_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|2320089_2321475_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|2321503_2321890_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|2321905_2322220_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
2326495:2326512	attR	TCTGTGTTGGGGCCCCGC	NA	NA	NA	NA
>prophage 12
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	2349144	2401158	2910878	protease,tRNA,holin,bacteriocin	Streptococcus_phage(40.0%)	52	NA	NA
WP_000448934.1|2349144_2350134_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|2350428_2350824_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217731.1|2351194_2351914_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000959279.1|2352034_2353021_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_000082727.1|2353068_2354877_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.4	1.2e-46
WP_000896695.1|2355336_2356143_-	DsbA family protein	NA	NA	NA	NA	NA
WP_000214070.1|2356165_2356531_-	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000224612.1|2356634_2357228_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242104.1|2357413_2357761_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|2357777_2358413_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|2358429_2359239_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669942.1|2359235_2360090_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062407.1|2360110_2361496_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395153.1|2361505_2363350_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000933200.1|2363627_2364398_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|2364594_2365680_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570705.1|2366021_2367590_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_000889181.1|2367731_2368490_+	esterase family protein	NA	NA	NA	NA	NA
WP_000600387.1|2368683_2369193_+	2'-5' RNA ligase family protein	NA	NA	NA	NA	NA
WP_001154224.1|2369305_2370496_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258650.1|2370473_2371649_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340124.1|2372079_2373564_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_072434963.1|2373544_2373805_+	YueH family protein	NA	NA	NA	NA	NA
WP_001049947.1|2373804_2375367_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.0	3.8e-36
WP_000928413.1|2375668_2376472_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_014937014.1|2376690_2379015_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.1e-11
WP_000021872.1|2379031_2380390_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414168.1|2380528_2382040_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287260.1|2382528_2383098_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|2383307_2383526_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668814.1|2383606_2384593_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|2384791_2384968_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033867.1|2384982_2385585_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_099119695.1|2385884_2385962_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_000790905.1|2386596_2386881_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000870811.1|2386924_2388889_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000668623.1|2388891_2389212_+	YxeA family protein	NA	NA	NA	NA	NA
WP_000571192.1|2389208_2389850_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	1.0e-19
WP_001796515.1|2389937_2390228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157958947.1|2390317_2390506_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_000766009.1|2390594_2390951_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001081332.1|2391441_2392401_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001794249.1|2392449_2392581_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000867362.1|2392644_2392860_-	TM2 domain-containing protein	NA	NA	NA	NA	NA
WP_000620945.1|2393024_2393576_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000070966.1|2393626_2394565_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000190616.1|2394746_2396108_+	isochorismate synthase MenF	NA	NA	NA	NA	NA
WP_000526673.1|2396094_2397768_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_000150215.1|2397754_2398558_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_000184947.1|2398550_2399372_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000284455.1|2399609_2399939_-	staphostatin B	NA	NA	NA	NA	NA
WP_001088778.1|2399976_2401158_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
>prophage 13
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	2420941	2429414	2910878		Synechococcus_phage(33.33%)	9	NA	NA
WP_001807816.1|2420941_2421424_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010409.1|2421410_2422535_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174055.1|2422538_2423243_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	2.1e-47
WP_000848351.1|2423242_2423506_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|2423507_2424179_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032750.1|2424171_2426361_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.4	1.3e-140
WP_000483707.1|2426339_2427824_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	8.5e-46
WP_000030815.1|2427816_2428845_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.1	2.9e-61
WP_000238668.1|2428847_2429414_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	2.7e-29
>prophage 14
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	2685688	2690876	2910878		Staphylococcus_phage(66.67%)	8	NA	NA
WP_001807853.1|2685688_2685886_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
WP_074347689.1|2686572_2686800_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	72.1	1.9e-18
WP_001002341.1|2687100_2687307_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	55.2	5.5e-12
WP_001788716.1|2688007_2688118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|2688510_2688696_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_000477490.1|2689206_2689623_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000974166.1|2690054_2690639_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	42.6	4.4e-30
WP_001215406.1|2690702_2690876_-	hypothetical protein	NA	A0A059NT83	Lactococcus_phage	51.9	3.6e-09
>prophage 15
NZ_LT992468	Staphylococcus aureus isolate 12_LA_293 chromosome I	2910878	2903715	2910522	2910878	plate,holin	Staphylococcus_phage(70.0%)	10	NA	NA
WP_000126130.1|2903715_2903931_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
WP_016187462.1|2904146_2904563_-	hypothetical protein	NA	M9QRV7	Staphylococcus_phage	100.0	6.4e-76
WP_000455173.1|2904534_2905062_-	DUF4065 domain-containing protein	NA	M9QX37	Staphylococcus_phage	100.0	3.4e-98
WP_000201920.1|2905083_2905263_-	hypothetical protein	NA	M9QYR8	Staphylococcus_phage	100.0	4.1e-24
WP_001148129.1|2906165_2907611_-	SH3 domain-containing protein	NA	Q4ZB16	Staphylococcus_virus	96.9	1.7e-288
WP_000354117.1|2907591_2908029_-|holin	phage holin	holin	M9QTA6	Staphylococcus_phage	97.9	3.8e-71
WP_000466774.1|2908164_2908464_-	DUF2951 family protein	NA	M9QRV2	Staphylococcus_phage	100.0	2.6e-31
WP_000916022.1|2908509_2908674_-	XkdX family protein	NA	M9QX31	Staphylococcus_phage	98.1	1.9e-23
WP_001166606.1|2908666_2909056_-	DUF2977 domain-containing protein	NA	Q4ZCZ7	Staphylococcus_virus	95.3	5.4e-61
WP_114621479.1|2909055_2910522_-|plate	phage baseplate upper protein	plate	A0A2I6PE72	Staphylococcus_phage	99.4	1.4e-271
