bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	1.1|497740|25|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	92.00	25	2	0	1	25	497909	497933	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	4e-04	34.9	1.0	GGCGAAAATACAGCTTACAATAATG	497909-497933	GGCGAAAAGTCAGCTTACAATAATG	2
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	1.2|497796|25|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	92.00	25	2	0	1	25	2333400	2333424	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	4e-04	34.9	1.0	TTGGAACAGCAATTTCTACAGACAA	2333400-2333424	TTGGAACACCAATTCCTACAGACAA	2
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	100.00	31	0	0	1	31	1154087	1154057	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	9e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1154057-1154087	GGGCCCCAACACAGAGAATTTCGAAAAGAAA	0
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	100.00	31	0	0	1	31	1192888	1192918	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	9e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1192888-1192918	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	100.00	31	0	0	1	31	2179258	2179288	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	9e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2179258-2179288	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	100.00	31	0	0	1	31	2179368	2179398	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	9e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2179368-2179398	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	100.00	31	0	0	1	31	2179478	2179508	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	9e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2179478-2179508	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	100.00	31	0	0	1	31	2247578	2247608	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	9e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2247578-2247608	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	479721	479751	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	479721-479751	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	479779	479809	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	479779-479809	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	479837	479867	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	479837-479867	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	619458	619428	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	619428-619458	GGGCCCCAACATAGAGAATTTCGAAAAGAAA	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	888983	888953	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	888953-888983	GGGGCCCAACACAGAGAATTTCGAAAAGAAA	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	1013485	1013455	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1013455-1013485	GGGCCCCAACAAAGAGAATTTCGAAAAGAAA	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	1104718	1104748	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1104718-1104748	TTTCTTTTCGAAATTCTCTATGTTGGGGCCC	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	1285854	1285884	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1285854-1285884	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	1386182	1386152	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1386152-1386182	GGGCCCCAACACAGAGAATTTCGAATAGAAA	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	1386236	1386206	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1386206-1386236	GGGCCCCAACACAGAGAATTTCGAATAGAAA	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	1990721	1990691	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1990691-1990721	GGGCCCCAACATAGAGAATTTCGAAAAGAAA	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	2081499	2081469	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2081469-2081499	GGGCCCCAACACAGAGAATTTCGACAAGAAA	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	2496824	2496854	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2496824-2496854	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	96.77	31	1	0	1	31	2541889	2541859	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2541859-2541889	GGGCCCCAACACAGAGAATTTCAAAAAGAAA	1
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	93.55	31	2	0	1	31	143275	143305	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	7e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	143275-143305	TTTCTTTTCGAAATTCTCTGTATTGGGGGCC	2
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	93.55	31	2	0	1	31	1068780	1068810	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	7e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1068780-1068810	TTTCATTTCGAAATTCTCTATGTTGGGGCCC	2
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	93.55	31	2	0	1	31	1108856	1108826	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	7e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1108826-1108856	GGTCCCCAACACAGAGGATTTCGAAAAGAAA	2
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	93.55	31	2	0	1	31	1595127	1595157	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	7e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1595127-1595157	TTTCTTTTCGGAATTCTCTGTGTTGGAGCCC	2
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	93.55	31	2	0	1	31	1641217	1641247	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	7e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1641217-1641247	TTTCTTTTCGAAAATCTCTGTGTTGAGGCCC	2
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	3.1|1059799|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	93.55	31	2	0	1	31	2507572	2507602	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	7e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2507572-2507602	TTTCTTTTTGAAATTCTCTATGTTGGGGCCC	2
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	4.1|1109150|31|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	93.55	31	2	0	1	31	1054226	1054196	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	7e-07	44.4	1.0	AAGAACCAATACATAATAAAGCATAAGTGAT	1054196-1054226	ATCACTAATGATTTATTATGTATTGGTTCTT	2
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	6.1|2081542|26|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	100.00	26	0	0	1	26	2179330	2179305	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	1e-06	42.8	1.0	AGAATTTCAAAAAAGAAATTCTACAG	2179305-2179330	CTGTAGAATTTCTTTTTTGAAATTCT	0
NZ_LT992463	Staphylococcus aureus isolate 2_LA_86 chromosome I	6.1|2081542|26|NZ_LT992463|CRISPRCasFinder	NZ_LT992463.1	Staphylococcus aureus isolate 2_LA_86 chromosome I	100.00	26	0	0	1	26	2179440	2179415	497709-497908|897486-897594|1059773-1059855|1109125-1109205|1993154-1993236|2081508-2081601|2322326-2322538|2377957-2378107|2718094-2718188|2746039-2746149	1e-06	42.8	1.0	AGAATTTCAAAAAAGAAATTCTACAG	2179415-2179440	CTGTAGAATTTCTTTTTTGAAATTCT	0
