bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	1.1|1240036|37|NZ_LT992435|CRISPRCasFinder	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	94.59	37	2	0	1	37	1239947	1239983	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	2e-09	53.9	1.0	AGCTCACAAAACCCTTGATATCATTGGTTTCCCATGA	1239947-1239983	AGCTCACAAAACCCTTGATATCACTGGTTTCTCATGA	2
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	30048	30035	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	30035-30048	CACATTATTGTAAG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	130496	130509	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	130496-130509	CTTACAATAATGTG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	350024	350011	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	350011-350024	CACATTATTGTAAG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	1267750	1267737	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	1267737-1267750	CACATTATTGTAAG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	1278556	1278543	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	1278543-1278556	CACATTATTGTAAG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	1278670	1278657	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	1278657-1278670	CACATTATTGTAAG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	1278730	1278717	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	1278717-1278730	CACATTATTGTAAG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	1313111	1313124	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	1313111-1313124	CTTACAATAATGTG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	1471624	1471637	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	1471624-1471637	CTTACAATAATGTG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	1983161	1983174	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	1983161-1983174	CTTACAATAATGTG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	2020314	2020327	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	2020314-2020327	CTTACAATAATGTG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	2542286	2542273	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	2542273-2542286	CACATTATTGTAAG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	2598354	2598341	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	2598341-2598354	CACATTATTGTAAG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	2647193	2647206	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	2647193-2647206	CTTACAATAATGTG	0
NZ_LT992435	Staphylococcus aureus isolate 1549-SCV chromosome I	4.2|2647164|14|NZ_LT992435|PILER-CR	NZ_LT992435.1	Staphylococcus aureus isolate 1549-SCV chromosome I	100.00	14	0	0	1	14	2647249	2647262	1239985-1240123|1430970-1431063|2437181-2437282|2647047-2647192	0.76	23.8	1.0	CTTACAATAATGTG	2647249-2647262	CTTACAATAATGTG	0
