bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	1.1|1240036|37|NZ_LT992436|CRISPRCasFinder	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	94.59	37	2	0	1	37	1239947	1239983	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	2e-09	53.9	1.0	AGCTCACAAAACCCTTGATATCATTGGTTTCCCATGA	1239947-1239983	AGCTCACAAAACCCTTGATATCACTGGTTTCTCATGA	2
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	30048	30035	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	30035-30048	CACATTATTGTAAG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	130496	130509	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	130496-130509	CTTACAATAATGTG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	350024	350011	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	350011-350024	CACATTATTGTAAG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	1267751	1267738	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	1267738-1267751	CACATTATTGTAAG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	1278557	1278544	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	1278544-1278557	CACATTATTGTAAG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	1278671	1278658	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	1278658-1278671	CACATTATTGTAAG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	1278731	1278718	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	1278718-1278731	CACATTATTGTAAG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	1313112	1313125	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	1313112-1313125	CTTACAATAATGTG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	1471625	1471638	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	1471625-1471638	CTTACAATAATGTG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	1983162	1983175	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	1983162-1983175	CTTACAATAATGTG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	2020315	2020328	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	2020315-2020328	CTTACAATAATGTG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	2542287	2542274	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	2542274-2542287	CACATTATTGTAAG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	2598355	2598342	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	2598342-2598355	CACATTATTGTAAG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	2647194	2647207	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	2647194-2647207	CTTACAATAATGTG	0
NZ_LT992436	Staphylococcus aureus isolate 1549-REV chromosome I	4.2|2647165|14|NZ_LT992436|PILER-CR	NZ_LT992436.1	Staphylococcus aureus isolate 1549-REV chromosome I	100.00	14	0	0	1	14	2647250	2647263	1239985-1240123|1430971-1431064|2437182-2437283|2647048-2647193	0.76	23.8	1.0	CTTACAATAATGTG	2647250-2647263	CTTACAATAATGTG	0
