assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900187255.1_51184_F02	NZ_LT906449	Capnocytophaga haemolytica strain NCTC12947 chromosome 1	1	384469-384589	1	CRISPRCasFinder	no		DEDDh,cas3,WYL	Orphan	GCAAAGCTGGGGTGGAGATAGTGCATTTGGAG	32	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL	NA,NA|46aa|down_8|NZ_LT906449.1_394284_394422_+	NA|270aa|up_9|NZ_LT906449.1_372717_373527_+	pfam08323, Glyco_transf_5, Starch synthase catalytic domain	NA|508aa|up_8|NZ_LT906449.1_373529_375053_+	pfam14092, DUF4270, Domain of unknown function (DUF4270)	NA|107aa|up_7|NZ_LT906449.1_375063_375384_+	cd11567, YciH_like, Homologs of eIF1/SUI1 including Escherichia coli YciH	NA|249aa|up_6|NZ_LT906449.1_375427_376174_+	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|266aa|up_5|NZ_LT906449.1_376495_377293_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|105aa|up_4|NZ_LT906449.1_377305_377620_+	pfam01192, RNA_pol_Rpb6, RNA polymerase Rpb6	NA|396aa|up_3|NZ_LT906449.1_377709_378897_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|746aa|up_2|NZ_LT906449.1_378904_381142_+	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92	NA|597aa|up_1|NZ_LT906449.1_381420_383211_+	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]	NA|310aa|up_0|NZ_LT906449.1_383185_384115_+	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|223aa|down_0|NZ_LT906449.1_384771_385440_-	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain	NA|243aa|down_1|NZ_LT906449.1_385627_386356_-	cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16	NA|370aa|down_2|NZ_LT906449.1_386509_387619_-	PRK14289, PRK14289, molecular chaperone DnaJ	NA|190aa|down_3|NZ_LT906449.1_387629_388199_-	cd00446, GrpE, nucleotide exchange factor GrpE	NA|278aa|down_4|NZ_LT906449.1_388631_389465_+	sd00036, LRR_3, leucine-rich repeats	NA|67aa|down_5|NZ_LT906449.1_389571_389772_+	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|805aa|down_6|NZ_LT906449.1_389777_392192_+	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|631aa|down_7|NZ_LT906449.1_392373_394266_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|46aa|down_8|NZ_LT906449.1_394284_394422_+	NA	NA|268aa|down_9|NZ_LT906449.1_394503_395307_+	pfam09509, Hypoth_Ymh, Protein of unknown function (Hypoth_ymh)
GCF_900187255.1_51184_F02	NZ_LT906449	Capnocytophaga haemolytica strain NCTC12947 chromosome 1	2	1802162-1802283	2	CRISPRCasFinder	no		DEDDh,cas3,WYL	Orphan	GTTGTTATCAATCACAAAACTACAAAATTTGAAGGCAATTCACAAC	46	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL	NA|57aa|up_5|NZ_LT906449.1_1797811_1797982_-,NA|140aa|up_2|NZ_LT906449.1_1799743_1800163_-,NA|353aa|up_1|NZ_LT906449.1_1800365_1801424_-,NA|307aa|down_0|NZ_LT906449.1_1802582_1803503_+,NA|124aa|down_1|NZ_LT906449.1_1803574_1803946_+,NA|136aa|down_3|NZ_LT906449.1_1804731_1805139_+,NA|129aa|down_4|NZ_LT906449.1_1805213_1805600_-	NA|108aa|up_9|NZ_LT906449.1_1795924_1796248_-	pfam13644, DKNYY, DKNYY family	NA|94aa|up_8|NZ_LT906449.1_1796290_1796572_-	pfam13644, DKNYY, DKNYY family	NA|69aa|up_7|NZ_LT906449.1_1796496_1796703_-	pfam13644, DKNYY, DKNYY family	NA|334aa|up_6|NZ_LT906449.1_1796792_1797794_-	COG3407, MVD1, Mevalonate pyrophosphate decarboxylase [Lipid metabolism]	NA|57aa|up_5|NZ_LT906449.1_1797811_1797982_-	NA	NA|204aa|up_4|NZ_LT906449.1_1797986_1798598_-	cd03140, GATase1_PfpI_3, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus	NA|286aa|up_3|NZ_LT906449.1_1798679_1799537_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|140aa|up_2|NZ_LT906449.1_1799743_1800163_-	NA	NA|353aa|up_1|NZ_LT906449.1_1800365_1801424_-	NA	NA|146aa|up_0|NZ_LT906449.1_1801553_1801991_-	PRK00733, hppA, membrane-bound proton-translocating pyrophosphatase; Validated	NA|307aa|down_0|NZ_LT906449.1_1802582_1803503_+	NA	NA|124aa|down_1|NZ_LT906449.1_1803574_1803946_+	NA	NA|83aa|down_2|NZ_LT906449.1_1804397_1804646_+	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|136aa|down_3|NZ_LT906449.1_1804731_1805139_+	NA	NA|129aa|down_4|NZ_LT906449.1_1805213_1805600_-	NA	NA|268aa|down_5|NZ_LT906449.1_1805886_1806690_+	pfam11306, DUF3108, Protein of unknown function (DUF3108)	NA|831aa|down_6|NZ_LT906449.1_1806765_1809258_+	sd00010, SLR, Sel1-like repeat	NA|292aa|down_7|NZ_LT906449.1_1809332_1810208_-	cd13961, PT_UbiA_DGGGPS, Geranylgeranylglycerol-phosphate geranylgeranyltransferase	NA|442aa|down_8|NZ_LT906449.1_1810361_1811687_-	cd16894, MltD-like, Membrane-bound lytic murein transglycosylase D and similar proteins	NA|775aa|down_9|NZ_LT906449.1_1812143_1814468_+	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C
GCF_900187255.1_51184_F02	NZ_LT906449	Capnocytophaga haemolytica strain NCTC12947 chromosome 1	3	1969098-1969215	3	CRISPRCasFinder	no		DEDDh,cas3,WYL	Orphan	CCTAAAAAACTTTTTTTAATTGCCGTCCCACGTC	34	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL	NA|134aa|up_3|NZ_LT906449.1_1964670_1965072_-,NA|500aa|up_1|NZ_LT906449.1_1965952_1967452_-,NA|629aa|down_2|NZ_LT906449.1_1975975_1977862_-,NA|81aa|down_3|NZ_LT906449.1_1977928_1978171_-	NA|305aa|up_9|NZ_LT906449.1_1960556_1961471_+	TIGR03814, Glutaminase_1, glutaminase A	NA|110aa|up_8|NZ_LT906449.1_1961467_1961797_-	cd04765, HTH_MlrA-like_sg2, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators	NA|326aa|up_7|NZ_LT906449.1_1961812_1962790_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|96aa|up_6|NZ_LT906449.1_1962869_1963157_+	COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion]	NA|324aa|up_5|NZ_LT906449.1_1963159_1964131_-	pfam04443, LuxE, Acyl-protein synthetase, LuxE	NA|169aa|up_4|NZ_LT906449.1_1964158_1964665_-	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]	NA|134aa|up_3|NZ_LT906449.1_1964670_1965072_-	NA	NA|160aa|up_2|NZ_LT906449.1_1965399_1965879_+	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain	NA|500aa|up_1|NZ_LT906449.1_1965952_1967452_-	NA	NA|403aa|up_0|NZ_LT906449.1_1967459_1968668_-	pfam16215, DUF4876, Protein of unknown function (DUF4876)	NA|907aa|down_0|NZ_LT906449.1_1970746_1973467_-	pfam07715, Plug, TonB-dependent Receptor Plug Domain	NA|543aa|down_1|NZ_LT906449.1_1974256_1975885_+	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|629aa|down_2|NZ_LT906449.1_1975975_1977862_-	NA	NA|81aa|down_3|NZ_LT906449.1_1977928_1978171_-	NA	NA|331aa|down_4|NZ_LT906449.1_1978326_1979319_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|197aa|down_5|NZ_LT906449.1_1979441_1980032_+	PRK00150, def, peptide deformylase; Reviewed	NA|140aa|down_6|NZ_LT906449.1_1980050_1980470_+	pfam18347, DUF5606, Domain of unknown function (DUF5606)	NA|65aa|down_7|NZ_LT906449.1_1980567_1980762_-	pfam01783, Ribosomal_L32p, Ribosomal L32p protein family	NA|178aa|down_8|NZ_LT906449.1_1980769_1981303_-	pfam02620, DUF177, Uncharacterized ACR, COG1399	NA|396aa|down_9|NZ_LT906449.1_1982019_1983207_+	PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional
GCF_900187255.1_51184_F02	NZ_LT906449	Capnocytophaga haemolytica strain NCTC12947 chromosome 1	4	2369439-2369634	4	CRISPRCasFinder	no		DEDDh,cas3,WYL	Orphan	TAAAAATTGTTGGCGACACATCAACG	26	0	0	NA	NA	NA	4	4	Orphan	DEDDh,cas3,WYL	NA|216aa|up_3|NZ_LT906449.1_2366481_2367129_+,NA|135aa|up_2|NZ_LT906449.1_2367173_2367578_+,NA	NA|599aa|up_9|NZ_LT906449.1_2359310_2361107_-	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]	NA|226aa|up_8|NZ_LT906449.1_2361226_2361904_-	pfam08447, PAS_3, PAS fold	NA|233aa|up_7|NZ_LT906449.1_2361944_2362643_-	pfam08447, PAS_3, PAS fold	NA|566aa|up_6|NZ_LT906449.1_2363018_2364716_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|126aa|up_5|NZ_LT906449.1_2364729_2365107_+	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|395aa|up_4|NZ_LT906449.1_2365197_2366382_-	cd00585, Peptidase_C1B, Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC)	NA|216aa|up_3|NZ_LT906449.1_2366481_2367129_+	NA	NA|135aa|up_2|NZ_LT906449.1_2367173_2367578_+	NA	NA|366aa|up_1|NZ_LT906449.1_2367716_2368814_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|182aa|up_0|NZ_LT906449.1_2368878_2369424_+	pfam02525, Flavodoxin_2, Flavodoxin-like fold	NA|187aa|down_0|NZ_LT906449.1_2369723_2370284_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|483aa|down_1|NZ_LT906449.1_2370433_2371882_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|1052aa|down_2|NZ_LT906449.1_2372931_2376087_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|465aa|down_3|NZ_LT906449.1_2376417_2377812_+	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown]	NA|163aa|down_4|NZ_LT906449.1_2377798_2378287_+	pfam14109, GldH_lipo, GldH lipoprotein	NA|769aa|down_5|NZ_LT906449.1_2378295_2380602_+	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]	NA|124aa|down_6|NZ_LT906449.1_2380779_2381151_+	pfam11680, DUF3276, Protein of unknown function (DUF3276)	NA|308aa|down_7|NZ_LT906449.1_2381209_2382133_-	TIGR02225, Tyrosine_recombinase_XerD, tyrosine recombinase XerD	NA|365aa|down_8|NZ_LT906449.1_2382132_2383227_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|180aa|down_9|NZ_LT906449.1_2383272_2383812_-	pfam07659, DUF1599, Domain of Unknown Function (DUF1599)
GCF_900187255.1_51184_F02	NZ_LT906449	Capnocytophaga haemolytica strain NCTC12947 chromosome 1	5	2506562-2506665	5	CRISPRCasFinder	no		DEDDh,cas3,WYL	Orphan	TAGCAGTACACAACTAATTGGCTGTCG	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL	NA|282aa|up_9|NZ_LT906449.1_2496731_2497577_+,NA|114aa|up_8|NZ_LT906449.1_2497674_2498016_+,NA|144aa|down_2|NZ_LT906449.1_2510890_2511322_+,NA|69aa|down_3|NZ_LT906449.1_2511323_2511530_+,NA|481aa|down_6|NZ_LT906449.1_2515523_2516966_+,NA|81aa|down_7|NZ_LT906449.1_2517044_2517287_+,NA|102aa|down_8|NZ_LT906449.1_2517249_2517555_+	NA|282aa|up_9|NZ_LT906449.1_2496731_2497577_+	NA	NA|114aa|up_8|NZ_LT906449.1_2497674_2498016_+	NA	NA|246aa|up_7|NZ_LT906449.1_2498096_2498834_-	pfam02405, MlaE, Permease MlaE	NA|511aa|up_6|NZ_LT906449.1_2498931_2500464_-	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|416aa|up_5|NZ_LT906449.1_2500555_2501803_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|246aa|up_4|NZ_LT906449.1_2501806_2502544_+	COG0169, AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]	NA|195aa|up_3|NZ_LT906449.1_2502504_2503089_-	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|286aa|up_2|NZ_LT906449.1_2503107_2503965_-	cd06524, GH25_YegX-like, YegX is an uncharacterized bacterial protein with a glycosyl hydrolase family 25 (GH25) catalytic domain that is similar in sequence to the CH-type (Chalaropsis-type) lysozymes of the GH25 family of endolysins	NA|415aa|up_1|NZ_LT906449.1_2504040_2505285_-	pfam07075, DUF1343, Protein of unknown function (DUF1343)	NA|386aa|up_0|NZ_LT906449.1_2505346_2506504_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|230aa|down_0|NZ_LT906449.1_2506676_2507366_-	pfam16265, DUF4918, Domain of unknown function (DUF4918)	NA|193aa|down_1|NZ_LT906449.1_2510315_2510894_+	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|144aa|down_2|NZ_LT906449.1_2510890_2511322_+	NA	NA|69aa|down_3|NZ_LT906449.1_2511323_2511530_+	NA	NA|697aa|down_4|NZ_LT906449.1_2511551_2513642_+	cd08662, M13, Peptidase family M13 includes neprilysin and endothelin-converting enzyme I	NA|493aa|down_5|NZ_LT906449.1_2513717_2515196_-	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|481aa|down_6|NZ_LT906449.1_2515523_2516966_+	NA	NA|81aa|down_7|NZ_LT906449.1_2517044_2517287_+	NA	NA|102aa|down_8|NZ_LT906449.1_2517249_2517555_+	NA	NA|604aa|down_9|NZ_LT906449.1_2517560_2519372_+	pfam13646, HEAT_2, HEAT repeats
