The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT906463	Haemophilus pittmaniae strain NCTC13334 chromosome 1	2181355	188294	196777	2181355	protease	Bacillus_virus(33.33%)	10	NA	NA
WP_039847750.1|188294_189128_-	hypothetical protein	NA	A0A1I9SA48	Rhodococcus_phage	35.0	7.1e-34
WP_007241589.1|189449_189890_+	peptidoglycan-binding protein LysM	NA	G3MBQ1	Bacillus_virus	46.3	6.7e-07
WP_007241819.1|190101_191400_+	trigger factor	NA	NA	NA	NA	NA
WP_007241571.1|191534_192122_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	60.8	5.9e-59
WP_007241758.1|192126_193374_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.2	2.6e-125
WP_007241519.1|193482_193899_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_164703776.1|193901_194459_+	transcription termination/antitermination protein NusG	NA	A0A291AUS6	Sinorhizobium_phage	27.4	6.2e-10
WP_007241834.1|194710_195139_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_005649467.1|195143_195833_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_007241710.1|195961_196777_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	A0A127AWE5	Bacillus_phage	29.0	5.4e-18
>prophage 2
NZ_LT906463	Haemophilus pittmaniae strain NCTC13334 chromosome 1	2181355	493223	555784	2181355	tail,capsid,lysis,plate,portal,head,terminase	Mannheimia_phage(22.81%)	84	NA	NA
WP_095176696.1|493223_496700_-	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	37.3	5.7e-194
WP_007242651.1|496911_497370_-	xanthine phosphoribosyltransferase	NA	M4T1R9	Cellulophaga_phage	27.1	2.4e-07
WP_007242715.1|497475_498933_+	aminoacyl-histidine dipeptidase	NA	NA	NA	NA	NA
WP_095176697.1|499592_500609_-|portal	phage portal protein	portal	Q19UT6	Mannheimia_phage	59.6	6.9e-116
WP_007242743.1|500618_502403_-	oxidoreductase	NA	A0A0M3LRV4	Mannheimia_phage	65.4	5.0e-218
WP_007242765.1|502568_503396_+|capsid	GPO family capsid scaffolding protein	capsid	Q19UT4	Mannheimia_phage	53.1	1.6e-70
WP_007242708.1|503406_503535_+	hypothetical protein	NA	A0A218M4L4	Erwinia_phage	57.1	8.1e-06
WP_007242766.1|503755_504487_-	helix-turn-helix transcriptional regulator	NA	A0A2I7S9A5	Vibrio_phage	41.1	1.1e-41
WP_007242665.1|504640_504850_+	helix-turn-helix domain-containing protein	NA	A0A0C4UQU0	Shigella_phage	60.3	8.3e-16
WP_039847845.1|504861_506880_+	endonuclease	NA	A0A2I7S9A8	Vibrio_phage	43.8	1.5e-146
WP_039847846.1|506927_507428_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007242803.1|507461_508379_+	AAA family ATPase	NA	M4M9P4	Vibrio_phage	43.8	1.8e-62
WP_007242732.1|508378_508705_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007242797.1|508722_509244_+	host-nuclease inhibitor protein Gam	NA	F6MIJ0	Haemophilus_phage	55.2	9.5e-45
WP_007242709.1|509325_509523_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005688593.1|509531_509690_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007242727.1|509686_509854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095177130.1|509859_510234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095176698.1|510245_510476_+	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_039847847.1|510479_510773_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007242643.1|510869_511331_+	regulatory protein GemA	NA	A0A219VHC6	Ochrobactrum_phage	37.5	1.2e-09
WP_007242744.1|511327_511855_+	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	40.8	4.8e-36
WP_007242749.1|512001_512439_+	transcriptional regulator	NA	A0A0C4UR27	Shigella_phage	33.8	1.1e-12
WP_007242804.1|512519_513074_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	68.2	1.2e-74
WP_007242698.1|513074_513212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039847861.1|513208_513430_+	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	76.1	5.9e-20
WP_095176699.1|513426_513684_+	DUF2681 domain-containing protein	NA	NA	NA	NA	NA
WP_039847862.1|513806_514022_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007242775.1|514021_514351_+	DUF2730 family protein	NA	NA	NA	NA	NA
WP_007242676.1|514347_514641_+	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	63.0	2.6e-23
WP_007242710.1|514663_515233_+	DUF3486 family protein	NA	A0A2I7S9D1	Vibrio_phage	44.3	3.6e-37
WP_164703780.1|515232_516777_+	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	62.2	2.9e-166
WP_007242726.1|516787_518347_+	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	50.1	3.2e-136
WP_007242739.1|518336_519680_+|capsid	minor capsid protein	capsid	C9DGN7	Escherichia_phage	40.9	1.5e-94
WP_007242619.1|519822_520260_+	phage virion morphogenesis protein	NA	G9BWH2	Planktothrix_phage	34.8	1.4e-12
WP_039847848.1|520480_521545_+	hypothetical protein	NA	A0A0C4UQU6	Shigella_phage	46.9	4.5e-65
WP_095176700.1|521544_522471_+|head	head protein	head	C9DGP2	Escherichia_phage	51.6	1.7e-84
WP_007242618.1|522555_522927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095176701.1|522926_523346_+	DUF1320 family protein	NA	A0A0C4UR02	Shigella_phage	42.6	1.1e-19
WP_094188652.1|523900_524083_+	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_095176702.1|524082_525546_+|tail	phage tail protein	tail	A0A0C4UQS0	Shigella_phage	48.2	3.3e-119
WP_007242655.1|525558_525912_+|tail	tail protein	tail	NA	NA	NA	NA
WP_007242650.1|525922_526282_+	hypothetical protein	NA	A0A0C4UR03	Shigella_phage	42.7	1.1e-12
WP_095176703.1|526408_528490_+	tape measure protein	NA	A0A2I7S9D9	Vibrio_phage	34.8	5.5e-51
WP_039847863.1|528501_529935_+	DUF1194 domain-containing protein	NA	U5P4I0	Shigella_phage	45.2	4.7e-17
WP_007242659.1|529931_530690_+|tail	tail protein	tail	C9DGQ3	Escherichia_phage	39.0	1.5e-46
WP_007242795.1|530686_531139_+	hypothetical protein	NA	A0A0C4UQS1	Shigella_phage	38.6	1.4e-15
WP_007242718.1|531142_531667_+|plate	phage baseplate assembly protein V	plate	M1Q572	Vibrio_phage	45.2	1.4e-27
WP_007242792.1|531672_532092_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095176704.1|532091_533162_+|plate	baseplate J/gp47 family protein	plate	C9DGQ6	Escherichia_phage	41.3	1.3e-67
WP_007242649.1|533149_533737_+	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
WP_007242740.1|534495_535251_+	hypothetical protein	NA	Q94MX9	Haemophilus_virus	54.7	2.1e-32
WP_007242672.1|535243_535729_+	hypothetical protein	NA	F6MIM0	Haemophilus_phage	55.4	1.8e-45
WP_007242773.1|535721_536090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007242663.1|536091_536244_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095176705.1|536224_536965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007242607.1|537088_537919_+	hypothetical protein	NA	F6MIM2	Haemophilus_phage	70.9	7.9e-118
WP_123947607.1|538018_539002_+|capsid	phage major capsid protein, P2 family	capsid	Q19UT3	Mannheimia_phage	58.8	7.0e-97
WP_095176706.1|539001_539664_+|terminase	terminase	terminase	Q19US0	Mannheimia_phage	44.5	2.3e-43
WP_007242678.1|539785_540292_+|head	head completion/stabilization protein	head	E5E3S2	Burkholderia_phage	50.4	1.1e-29
WP_007242622.1|540291_540501_+|tail	tail protein	tail	R4JDL4	Burkholderia_phage	42.6	5.9e-06
WP_095176707.1|540502_540724_+|lysis	lysis protein	lysis	NA	NA	NA	NA
WP_039847849.1|540716_541235_+	lysozyme	NA	A0A0M3LPQ1	Mannheimia_phage	46.0	2.3e-35
WP_095176708.1|541219_541570_+	chemotaxis protein	NA	NA	NA	NA	NA
WP_007242787.1|541744_541960_+	molecular chaperone DnaK	NA	A0A0M3LS11	Mannheimia_phage	46.6	6.3e-11
WP_007242697.1|541956_542445_+|tail	phage tail protein	tail	F1BUP9	Erwinia_phage	43.0	7.1e-26
WP_007242620.1|542437_542896_+	phage virion morphogenesis protein	NA	A0A2H4J927	uncultured_Caudovirales_phage	51.1	6.0e-27
WP_007242741.1|542873_543140_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007242782.1|543211_545938_+|tail	phage tail tape measure protein	tail	V5YUN9	Pseudomonas_phage	33.0	8.2e-79
WP_095176709.1|546039_546618_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007242662.1|546625_547057_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095176710.1|547176_547770_+|plate	phage baseplate assembly protein V	plate	A0A0M3LPY9	Mannheimia_phage	52.2	6.0e-35
WP_007242671.1|547769_548108_+	hypothetical protein	NA	A0A1S5NNH3	Burkholderia_phage	55.3	3.2e-17
WP_007242790.1|548104_549019_+|plate	baseplate assembly protein	plate	Q19UQ5	Mannheimia_phage	49.3	6.5e-73
WP_039847850.1|549011_549578_+|tail	phage tail protein I	tail	A0A218M4J3	Erwinia_phage	35.9	2.7e-24
WP_007242774.1|549578_550484_+|tail	tail fiber protein	tail	M1TAS6	Escherichia_phage	44.0	4.4e-45
WP_094188656.1|550898_551240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095176711.1|551218_551497_+	DNA helicase UvrD	NA	Q776W9	Haemophilus_phage	67.4	6.9e-26
WP_007242681.1|551626_552811_+|tail	tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	48.5	1.1e-101
WP_005700105.1|552814_553321_+|tail	phage major tail tube protein	tail	Q19UP8	Mannheimia_phage	61.9	5.8e-55
WP_007242702.1|553399_553693_+|tail	phage tail assembly protein	tail	A0A0F7LBN9	Escherichia_phage	42.9	2.5e-10
WP_005700138.1|553692_553839_+|tail	GpE family phage tail protein	tail	E5E3Q0	Burkholderia_phage	65.0	2.9e-07
WP_007242691.1|554168_554606_+|tail	phage tail protein	tail	A0A0M3LQ18	Mannheimia_phage	55.9	1.2e-40
WP_095176712.1|554605_555784_+	phage late control D family protein	NA	R9QBT3	Mannheimia_phage	50.9	2.8e-100
>prophage 3
NZ_LT906463	Haemophilus pittmaniae strain NCTC13334 chromosome 1	2181355	1540903	1549207	2181355		Tetraselmis_virus(16.67%)	8	NA	NA
WP_095176959.1|1540903_1541839_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	34.7	2.2e-39
WP_007241415.1|1541840_1542389_+	HAD family hydrolase	NA	A0A140XBD6	Dickeya_phage	44.8	5.7e-24
WP_007241425.1|1542445_1543108_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	55.5	4.4e-55
WP_095176960.1|1543455_1545216_+	ABC transporter ATP-binding protein/permease	NA	A0A1V0SE00	Indivirus	24.6	4.4e-09
WP_095176961.1|1545395_1546343_-	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	38.4	6.8e-41
WP_007241485.1|1546363_1547275_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_007241479.1|1547274_1547895_-	outer membrane lipoprotein LolB	NA	NA	NA	NA	NA
WP_039847715.1|1547947_1549207_-	multifunctional CCA addition/repair protein	NA	A0A0F6YPT7	Sinorhizobium_phage	46.4	4.0e-89
