The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT906475	Riemerella anatipestifer strain NCTC11014 chromosome 1	2156703	790374	797378	2156703		Enterobacteria_phage(33.33%)	8	NA	NA
WP_004918316.1|790374_790980_-	LemA family protein	NA	A0A1X9IGG1	Lactococcus_phage	31.0	2.1e-11
WP_004918315.1|791060_791552_+	dihydrofolate reductase	NA	A0A0H3UYW4	Geobacillus_virus	44.0	1.3e-32
WP_004918313.1|791562_792867_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_004918312.1|792971_793829_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	H9NC64	Sphingomonas_phage	62.5	5.0e-99
WP_004918309.1|793833_794916_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	48.7	2.1e-86
WP_013446885.1|794926_795472_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	49.1	6.1e-42
WP_004918306.1|795504_796089_-	sugar transferase	NA	NA	NA	NA	NA
WP_013446886.1|796244_797378_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	22.9	9.1e-16
>prophage 2
NZ_LT906475	Riemerella anatipestifer strain NCTC11014 chromosome 1	2156703	2091030	2133029	2156703	portal,integrase,tail,terminase,capsid	Riemerella_phage(96.61%)	62	2090855:2090873	2117868:2117886
2090855:2090873	attL	TTTTTAATCCATTTTAACA	NA	NA	NA	NA
WP_004917801.1|2091030_2091978_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	45.5	6.1e-66
WP_004917802.1|2092134_2092497_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	38.1	3.0e-13
WP_004917806.1|2092742_2093987_+|integrase	tyrosine-type recombinase/integrase	integrase	F5A3G8	Riemerella_phage	100.0	8.2e-244
WP_004917808.1|2094025_2094208_-	helix-turn-helix transcriptional regulator	NA	F5A3G9	Riemerella_phage	100.0	6.5e-25
WP_004917809.1|2094207_2094549_-	hypothetical protein	NA	F5A3H0	Riemerella_phage	100.0	2.5e-62
WP_004917811.1|2094870_2095482_-	hypothetical protein	NA	F5A3H1	Riemerella_phage	100.0	3.5e-107
WP_004917814.1|2095847_2096126_+	helix-turn-helix transcriptional regulator	NA	F5A3H2	Riemerella_phage	100.0	3.1e-42
WP_004917816.1|2096147_2096495_+	hypothetical protein	NA	F5A394	Riemerella_phage	100.0	7.0e-60
WP_004917818.1|2096736_2097291_-	N-acetylmuramoyl-L-alanine amidase	NA	E7D0G0	Riemerella_phage	100.0	1.1e-104
WP_013447228.1|2097313_2097892_-	hypothetical protein	NA	F5A395	Riemerella_phage	95.3	4.4e-91
WP_004917822.1|2097881_2098403_-	hypothetical protein	NA	F5A396	Riemerella_phage	100.0	2.1e-92
WP_004917824.1|2098399_2098732_-	hypothetical protein	NA	F5A397	Riemerella_phage	100.0	1.5e-56
WP_004917828.1|2098715_2099039_-	hypothetical protein	NA	F5A398	Riemerella_phage	100.0	3.8e-52
WP_013447229.1|2099065_2102959_-|tail	phage tail protein	tail	F5A399	Riemerella_phage	74.6	0.0e+00
WP_013447230.1|2102946_2104050_-	galactose-binding protein	NA	F5A3A0	Riemerella_phage	66.2	1.7e-123
WP_004917834.1|2104046_2104478_-	hypothetical protein	NA	F5A3A1	Riemerella_phage	100.0	1.1e-59
WP_004917835.1|2104534_2104828_+	type II toxin-antitoxin system HigB family toxin	NA	F5A3A2	Riemerella_phage	100.0	1.7e-51
WP_004917838.1|2104824_2105187_+	helix-turn-helix domain-containing protein	NA	F5A3A3	Riemerella_phage	100.0	4.7e-59
WP_013447231.1|2105189_2109371_-	tape measure protein	NA	F5A3A4	Riemerella_phage	98.8	0.0e+00
WP_013447232.1|2109556_2109958_+	hypothetical protein	NA	F5A3A6	Riemerella_phage	47.6	4.2e-08
WP_013447233.1|2110282_2111158_-	Abi family protein	NA	NA	NA	NA	NA
WP_013447234.1|2111396_2111717_+	hypothetical protein	NA	F5A3D5	Riemerella_phage	96.2	1.9e-51
WP_013447235.1|2111719_2112433_+	phage antirepressor KilAC domain-containing protein	NA	F5A3A8	Riemerella_phage	89.6	1.0e-105
WP_004917849.1|2112603_2112789_-	hypothetical protein	NA	F5A3A9	Riemerella_phage	100.0	8.9e-30
WP_004917850.1|2112806_2113268_-	hypothetical protein	NA	F5A3B0	Riemerella_phage	100.0	7.6e-78
WP_004917852.1|2113347_2113854_-	hypothetical protein	NA	F5A3B1	Riemerella_phage	100.0	1.5e-90
WP_004917854.1|2113881_2114292_-	hypothetical protein	NA	F5A3B2	Riemerella_phage	100.0	5.0e-73
WP_013447236.1|2114288_2114732_-	hypothetical protein	NA	F5A3B3	Riemerella_phage	99.3	1.7e-74
WP_013447237.1|2114722_2115046_-	hypothetical protein	NA	F5A3B4	Riemerella_phage	97.2	8.8e-57
WP_013447238.1|2115039_2115363_-	hypothetical protein	NA	F5A3B5	Riemerella_phage	95.3	2.6e-53
WP_013447239.1|2115362_2116445_-|capsid	major capsid protein	capsid	F5A3B6	Riemerella_phage	98.1	2.4e-199
WP_013447240.1|2116465_2116831_-	hypothetical protein	NA	F5A3B7	Riemerella_phage	90.2	6.0e-54
WP_013447241.1|2116834_2117491_-	hypothetical protein	NA	F5A3B8	Riemerella_phage	96.7	2.3e-80
WP_004917868.1|2117623_2117890_+	hypothetical protein	NA	F5A3B9	Riemerella_phage	96.6	2.5e-41
2117868:2117886	attR	TGTTAAAATGGATTAAAAA	NA	NA	NA	NA
WP_014411188.1|2117932_2118133_+	hypothetical protein	NA	F5A3C0	Riemerella_phage	90.9	3.8e-10
WP_013447243.1|2118417_2118567_+	hypothetical protein	NA	F5A3C1	Riemerella_phage	98.0	4.8e-18
WP_013447244.1|2118548_2118752_+	hypothetical protein	NA	F5A3C2	Riemerella_phage	98.5	1.0e-31
WP_013447245.1|2118746_2119790_-	hypothetical protein	NA	F5A3C5	Riemerella_phage	95.4	8.0e-192
WP_013447246.1|2119789_2121148_-|portal	phage portal protein	portal	F5A3C6	Riemerella_phage	97.5	1.6e-245
WP_004917880.1|2121261_2122560_-|terminase	terminase	terminase	F5A3C7	Riemerella_phage	100.0	7.5e-248
WP_004917881.1|2122654_2123137_-	hypothetical protein	NA	F5A3C8	Riemerella_phage	100.0	1.9e-87
WP_004917883.1|2123126_2123852_-	hypothetical protein	NA	F5A3C9	Riemerella_phage	100.0	3.4e-109
WP_013447247.1|2123826_2124531_-	phosphoadenosine phosphosulfate reductase family protein	NA	F5A3D0	Riemerella_phage	100.0	2.8e-132
WP_004917890.1|2124703_2125162_-	hypothetical protein	NA	F5A3D1	Riemerella_phage	100.0	3.5e-83
WP_004917892.1|2125158_2125587_-	recombination protein NinG	NA	F5A3D2	Riemerella_phage	100.0	8.6e-76
WP_004917895.1|2125689_2126004_-	DUF2693 domain-containing protein	NA	F5A3D3	Riemerella_phage	100.0	2.1e-55
WP_004917897.1|2126066_2126816_-	phage antirepressor Ant	NA	F5A3D4	Riemerella_phage	100.0	3.8e-127
WP_004917900.1|2126818_2127139_-	hypothetical protein	NA	F5A3D5	Riemerella_phage	100.0	3.1e-54
WP_004917901.1|2127712_2128537_-	hypothetical protein	NA	F5A3D6	Riemerella_phage	100.0	3.7e-152
WP_013447248.1|2128544_2128763_-	hypothetical protein	NA	F5A3E0	Riemerella_phage	93.5	2.9e-27
WP_013447249.1|2128778_2128958_-	hypothetical protein	NA	F5A3E1	Riemerella_phage	100.0	1.1e-27
WP_013447250.1|2128987_2129143_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004917912.1|2129326_2130076_-	hypothetical protein	NA	F5A3E2	Riemerella_phage	100.0	7.6e-144
WP_013447251.1|2130099_2130345_-	DUF551 domain-containing protein	NA	F5A3E3	Riemerella_phage	96.3	1.2e-42
WP_013447252.1|2130344_2130800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013447253.1|2130801_2131098_-	MazG-like family protein	NA	F5A3E4	Riemerella_phage	100.0	2.0e-47
WP_013447254.1|2131204_2131351_-	hypothetical protein	NA	F5A3E5	Riemerella_phage	100.0	4.4e-24
WP_013447255.1|2131354_2131522_-	hypothetical protein	NA	F5A3E5	Riemerella_phage	100.0	2.8e-22
WP_004917921.1|2131500_2131686_-	hypothetical protein	NA	F5A3E6	Riemerella_phage	98.4	1.5e-24
WP_004917923.1|2131742_2132555_-	phosphoadenosine phosphosulfate reductase family protein	NA	F5A3E7	Riemerella_phage	100.0	3.9e-154
WP_004917925.1|2132580_2132868_-	class I SAM-dependent methyltransferase	NA	F5A3E8	Riemerella_phage	98.9	3.9e-48
WP_004917927.1|2132864_2133029_-	hypothetical protein	NA	F5A3E9	Riemerella_phage	92.7	1.6e-11
>prophage 3
NZ_LT906475	Riemerella anatipestifer strain NCTC11014 chromosome 1	2156703	2136747	2140919	2156703		Riemerella_phage(88.89%)	9	NA	NA
WP_004917939.1|2136747_2137320_-	ERF family protein	NA	A0A1B1IP10	uncultured_Mediterranean_phage	58.4	5.9e-48
WP_004917941.1|2137434_2137620_-	hypothetical protein	NA	F5A3F9	Riemerella_phage	94.4	4.6e-10
WP_004917945.1|2137716_2138031_-	hypothetical protein	NA	F5A3G1	Riemerella_phage	100.0	2.0e-53
WP_004917947.1|2138086_2138296_-	hypothetical protein	NA	F5A3G2	Riemerella_phage	100.0	9.1e-31
WP_004917949.1|2138292_2138472_-	hypothetical protein	NA	F5A3G3	Riemerella_phage	100.0	1.4e-24
WP_004917952.1|2138591_2139158_+	hypothetical protein	NA	F5A3G4	Riemerella_phage	99.4	1.9e-86
WP_004917958.1|2139427_2140186_+	hypothetical protein	NA	F5A3G5	Riemerella_phage	100.0	2.5e-142
WP_004917960.1|2140200_2140653_+	hypothetical protein	NA	F5A3G6	Riemerella_phage	100.0	9.0e-84
WP_004917963.1|2140649_2140919_+	hypothetical protein	NA	F5A3G7	Riemerella_phage	100.0	6.4e-45
