The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	254958	308390	4108502	transposase	Planktothrix_phage(40.0%)	46	NA	NA
WP_010931661.1|254958_255909_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|256078_257305_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|257504_258371_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|258363_259326_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|259426_260377_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929591.1|260475_261426_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|261524_262475_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|262471_263965_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|263961_267069_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|267065_270134_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|270130_271381_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|271561_272323_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|272355_273006_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|273008_273848_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|274088_274832_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003815049.1|274914_275262_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|275359_276202_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|276246_277134_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|277160_277349_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|277446_278904_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|278890_280417_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|280435_280903_-	CopD family protein	NA	NA	NA	NA	NA
WP_010931671.1|280902_281925_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_169507388.1|282045_282765_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	4.7e-34
WP_003815066.1|282840_283941_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|283942_285133_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|285252_286269_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|286587_287259_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|287255_288164_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|288375_289023_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|292874_293951_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|293961_294771_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|294860_295634_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023853189.1|295634_295799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853639.1|295816_296767_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_077598841.1|296655_297678_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931674.1|297667_298822_+	CoA transferase	NA	NA	NA	NA	NA
WP_010931675.1|298861_300274_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_019247370.1|300398_301265_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931677.1|301266_302091_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_023853488.1|302087_302849_+	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
WP_003808010.1|302929_303616_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931679.1|303789_304797_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_003819309.1|304793_305573_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931680.1|305630_306893_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|307439_308390_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	360069	402823	4108502	transposase,tRNA	Synechococcus_phage(50.0%)	41	NA	NA
WP_010929577.1|360069_361020_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|361101_361437_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|361461_361896_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_019247164.1|361928_363146_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|363151_363649_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|363856_364792_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|365001_365793_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|365835_367257_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|367412_368363_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|368359_369550_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|369799_370711_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|370712_372851_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|372847_373387_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|373390_374119_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|374105_374999_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|375069_375465_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|375474_376005_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_010929588.1|376450_377401_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|377987_378536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|378507_378744_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|378871_379765_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929590.1|380934_382182_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|382178_382793_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|382928_383879_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|383921_385178_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|386409_387144_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|387149_387740_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|387764_388454_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|388450_389212_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|389291_390191_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|390284_391235_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|392035_393262_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_047122776.1|393261_393675_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|393864_394806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|395229_396204_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|396260_396842_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|396854_397157_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|397275_398334_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|398368_399640_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|400269_401451_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|401872_402823_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	410421	468895	4108502	transposase,tRNA	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|410421_411372_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|411446_412391_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|412387_414262_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|415609_416314_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|416310_417417_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|417678_418272_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|418268_419456_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|419518_420778_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|420801_421890_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|421897_422998_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|423001_423577_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|423580_424633_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|424763_425771_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|425772_427059_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|427075_427231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|427255_428059_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|428055_428922_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|428996_430127_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|430126_430966_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|431898_432501_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010929621.1|432530_433184_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|433316_434573_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_010929622.1|434620_435520_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|435595_435871_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|435878_436541_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|436602_437604_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|437618_438167_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|438224_439121_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|439117_440179_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|440214_441165_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|442064_443258_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|443339_443969_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|444030_444714_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|444723_446406_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|446693_447041_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|447131_447449_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|447731_448748_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|448823_449624_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|449620_450496_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|450506_451799_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|451841_452882_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|452987_453809_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|453909_454860_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|454958_455864_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|455860_456694_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|457530_458541_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|458537_458927_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|459820_461074_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|461164_462865_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|463291_463939_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|463937_465377_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|465469_465772_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|465799_466678_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|467944_468895_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	497679	558190	4108502	protease,transposase,tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|497679_498630_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|500073_500976_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|500953_501583_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|501865_503296_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|503329_503959_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|504007_505615_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|505639_506323_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|506404_506881_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|507087_508038_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|509153_509681_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|509772_510588_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|510648_511383_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|511420_513499_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|513748_514021_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|514122_515208_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|515211_517116_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|517112_520787_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|520847_521411_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|521418_521841_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929671.1|521868_522288_-	VOC family protein	NA	NA	NA	NA	NA
WP_076879599.1|522316_522790_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	31.1	2.2e-11
WP_003808391.1|522889_523387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|523541_525812_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|525860_527093_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|527191_528142_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|528244_528880_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|528876_529770_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|530164_531265_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|531346_531721_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|531780_534645_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|534789_535530_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|535599_536811_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|536839_537808_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|538421_539372_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|539528_539852_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|539956_540997_-	cyclase family protein	NA	NA	NA	NA	NA
WP_010929697.1|541002_541782_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|541827_542124_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|542149_542425_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|542481_543126_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|543125_543812_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|543941_544793_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|544843_545569_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|545600_546950_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|547061_547994_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446321.1|548451_551247_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|551840_554783_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|554854_555574_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|555612_556161_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|556315_557215_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|557239_558190_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	566122	619712	4108502	protease,transposase,tRNA	Bacillus_phage(25.0%)	46	NA	NA
WP_005012067.1|566122_567073_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|567159_568110_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|568106_569057_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|569155_569953_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|570902_571313_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003814358.1|572334_573078_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|573121_574165_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|574335_576438_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|577848_578805_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|578823_579315_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|579311_580667_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|580667_581366_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|581362_582064_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|582316_583366_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|583471_584413_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|584409_586299_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|586385_587024_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019247543.1|587166_588552_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|588482_589019_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|589170_590562_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|590578_591559_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|591694_592678_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|592742_593642_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|593748_595503_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|595510_596635_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|596648_597629_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929712.1|599870_600416_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|600499_602119_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|602134_603289_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|603302_603428_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|603424_605176_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|605172_606852_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|606914_607463_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|608605_608884_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|609927_610878_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929718.1|611156_611318_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|611325_611466_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|611984_612434_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|612443_613055_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247426.1|613213_614068_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|614087_615470_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|615534_616176_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|616315_616774_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|616798_617575_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|617628_618765_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|618761_619712_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	888097	947397	4108502	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
WP_023852617.1|888097_889048_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|890371_891148_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|891182_892955_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|892956_893859_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|893983_894343_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|894374_895337_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_010929591.1|895435_896386_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|896398_897334_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|897393_898233_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|898229_899399_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|899395_900685_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|900727_901102_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815384.1|901207_901945_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|901952_902657_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|902920_904441_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|904496_905060_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|905078_906110_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|906106_906895_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_019247413.1|906915_907074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997720.1|907070_908060_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|909816_910767_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|911989_912892_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|912893_913748_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|913794_914904_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|914914_915433_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|915462_916095_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|916166_916826_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814298.1|916822_918043_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|918311_919184_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_010931370.1|919339_920077_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931369.1|920079_921711_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931368.1|921806_922796_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927020.1|922792_923503_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931363.1|923598_924615_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|924886_925513_-	aminotransferase class IV	NA	NA	NA	NA	NA
WP_010931367.1|925568_926696_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|926701_932419_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|932986_933931_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|934119_935055_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|935172_936744_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|936823_938032_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|938529_939447_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|941807_942029_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|942359_943376_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|943460_943712_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|943715_944531_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|944643_945522_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|945633_947397_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
>prophage 8
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	953552	1007293	4108502	transposase	Salmonella_phage(33.33%)	48	NA	NA
WP_010930179.1|953552_954503_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|954598_955570_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|955574_956255_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|956392_956785_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|956892_957909_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|958148_958934_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|959028_960438_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|960448_961249_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|961269_962040_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931354.1|962082_962550_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|962546_963497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|965445_966324_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|967250_970229_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|970582_971533_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|971529_972618_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|972653_973517_-	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931351.1|974656_975046_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_014486103.1|975049_975832_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|975865_976651_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|976926_978066_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|978062_978854_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|978850_979600_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|979596_980469_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|980468_981470_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|981466_982630_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003808193.1|982655_983339_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|983292_984627_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|984619_985714_+	CoA transferase	NA	NA	NA	NA	NA
WP_005012067.1|986480_987431_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931343.1|989371_990631_+	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_003814858.1|990627_992166_+	SpoVR family protein	NA	NA	NA	NA	NA
WP_003814856.1|992162_993359_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931342.1|993355_994732_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814852.1|994743_995760_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927102.1|995828_997064_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931341.1|997164_997959_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|998328_998736_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929281.1|999153_999426_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_124740609.1|999595_999820_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814832.1|1000007_1000862_+	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_010931340.1|1000962_1001265_+	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814828.1|1001309_1001927_+	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931338.1|1001943_1002252_+	urease subunit beta	NA	NA	NA	NA	NA
WP_010931337.1|1002248_1003964_+	urease subunit alpha	NA	NA	NA	NA	NA
WP_014905506.1|1003966_1004584_+	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_019247677.1|1004684_1005269_+	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_010931336.1|1005293_1005938_+	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_023995489.1|1006342_1007293_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	1056231	1096181	4108502	protease,transposase,integrase,tRNA	Pseudomonas_phage(33.33%)	31	1053479:1053497	1073367:1073385
1053479:1053497	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931308.1|1056231_1056828_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|1056824_1057607_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|1057679_1058771_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|1059050_1060178_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|1060519_1061566_+	Fic family protein	NA	NA	NA	NA	NA
WP_100208325.1|1061576_1061717_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
WP_010931303.1|1061713_1064833_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_010931302.1|1064834_1067786_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|1067801_1069013_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_005013747.1|1069196_1070147_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|1070163_1070658_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|1070661_1070919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248455.1|1071462_1072374_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|1072455_1072740_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|1073523_1074474_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
1073367:1073385	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|1074892_1077457_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|1077501_1079355_-	autotransporter-associated beta strand repeat-containing protein	NA	NA	NA	NA	NA
WP_014905963.1|1079687_1081259_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_162291319.1|1082527_1082683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1082700_1083651_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905961.1|1083736_1084477_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_029443749.1|1084703_1085651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|1087038_1087989_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994811.1|1088006_1088219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814139.1|1088182_1088998_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931299.1|1089130_1090570_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814142.1|1090583_1090925_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931298.1|1090979_1092635_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_003814146.1|1092786_1093797_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814148.1|1093929_1094703_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|1095230_1096181_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	1106108	1154775	4108502	protease,transposase,holin,tRNA	Bovine_alphaherpesvirus(10.0%)	48	NA	NA
WP_005012808.1|1106108_1107059_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818450.1|1107197_1107950_+	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
WP_010931273.1|1108188_1109913_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	9.5e-49
WP_004566001.1|1109932_1111192_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931274.1|1111206_1112301_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
WP_023995440.1|1112297_1114424_-	lytic transglycosylase domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
WP_010931276.1|1114436_1115117_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_003807204.1|1115394_1116768_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_003818444.1|1116769_1117789_+	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
WP_003818443.1|1117852_1118824_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|1118888_1119839_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807199.1|1119937_1120780_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_010931277.1|1120779_1121115_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010931278.1|1121185_1122604_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.4	8.7e-40
WP_003807194.1|1122883_1123924_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_003818441.1|1124003_1124255_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
WP_010925730.1|1124365_1125529_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.8	5.0e-126
WP_010931279.1|1125812_1126667_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_010931280.1|1126663_1127554_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA	NA
WP_003807183.1|1127596_1128508_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
WP_010931281.1|1128534_1129227_+	DUF484 family protein	NA	NA	NA	NA	NA
WP_010931282.1|1129241_1130222_+	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	30.5	3.3e-14
WP_010931283.1|1130234_1132376_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003818434.1|1132424_1133393_-	putative membrane protein	NA	NA	NA	NA	NA
WP_019247300.1|1133383_1134052_-	DUF1007 family protein	NA	NA	NA	NA	NA
WP_010931286.1|1134012_1134948_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931287.1|1134944_1135841_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_010931288.1|1135837_1136560_-	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	1.1e-11
WP_019248127.1|1136550_1136715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003807166.1|1136888_1137392_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_010931290.1|1137668_1138784_+	GTP-binding protein	NA	NA	NA	NA	NA
WP_003807164.1|1138926_1139391_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_010931291.1|1139538_1140078_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003807162.1|1140099_1141434_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
WP_003807161.1|1141447_1141753_-	copper-binding protein	NA	NA	NA	NA	NA
WP_023853416.1|1142177_1142759_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_023852617.1|1142840_1143791_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1143889_1144840_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1144938_1145889_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814620.1|1146329_1147235_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_023853019.1|1147290_1148895_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_010931270.1|1149151_1150657_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
WP_003820744.1|1150671_1151136_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_005012067.1|1151425_1152376_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268687.1|1152393_1152582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003820745.1|1152538_1153069_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814611.1|1153068_1153380_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_005012808.1|1153824_1154775_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	1338992	1433029	4108502	transposase	Bacillus_virus(30.0%)	87	NA	NA
WP_005012067.1|1338992_1339943_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1340045_1340708_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1340802_1340973_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1341325_1342327_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1342329_1343526_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1343546_1344350_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247598.1|1344430_1344727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1344757_1345321_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1345361_1346219_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1346226_1346976_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1346997_1347870_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1347898_1348678_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1348711_1349509_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1352163_1352556_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1352549_1353410_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1353413_1354376_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1355152_1355842_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1356702_1357653_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1358002_1358872_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1358942_1359638_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1359627_1360137_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1360133_1361354_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1361301_1362204_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1363090_1364377_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1364415_1365789_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1365827_1366529_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1366827_1367817_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1367917_1368379_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1368394_1368943_-	cysteine dioxygenase family protein	NA	NA	NA	NA	NA
WP_010931172.1|1369084_1370560_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1370665_1371757_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1371760_1372543_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1372552_1373341_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1374466_1374901_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1374897_1375908_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1375951_1376878_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1377164_1377533_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_154698394.1|1377585_1377732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853143.1|1377749_1378700_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1378744_1381171_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1381219_1381912_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1381984_1383184_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1383201_1384107_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1384222_1385152_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1385177_1386524_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931160.1|1386551_1387301_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931159.1|1387314_1388097_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1388289_1389240_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931158.1|1389301_1390411_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1390923_1391760_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_023997028.1|1391829_1392795_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1392791_1393742_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998107.1|1393759_1393930_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247492.1|1394127_1394670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1395705_1396656_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1396897_1397266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1397311_1398436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931156.1|1399570_1400323_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1400414_1401035_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1401138_1402089_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1402085_1404194_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1404338_1404998_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1405029_1405494_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1405769_1405955_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1406006_1406759_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1406765_1408028_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003820806.1|1410385_1411513_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1411523_1412351_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1412337_1413204_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1414570_1414975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1415066_1416017_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120814.1|1416034_1416199_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033446288.1|1416386_1417298_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1417312_1418023_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1418019_1419264_+	aconitase X catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1419265_1419700_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1419728_1420034_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1420132_1421083_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247277.1|1421139_1422294_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1422368_1423319_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1423850_1424648_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1424695_1425349_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1425305_1426394_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1426558_1428784_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1431061_1431958_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_162268686.1|1431911_1432061_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1432078_1433029_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	1463415	1534385	4108502	protease,transposase	uncultured_Mediterranean_phage(25.0%)	53	NA	NA
WP_005012808.1|1463415_1464366_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1464422_1465535_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1467918_1468869_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1469459_1470236_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1470353_1470617_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1470717_1471722_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1471922_1473524_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1473549_1474308_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1474399_1475056_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1475146_1475911_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1475920_1476109_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1476164_1477208_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1477204_1477618_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1477614_1478235_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1478515_1479466_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1479633_1481025_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1481097_1481676_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1481792_1483190_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1483305_1484511_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1484610_1485129_-	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1485223_1485469_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1485696_1486011_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_010931116.1|1486100_1491290_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1491286_1493455_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1493510_1495826_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1495830_1497150_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1497168_1498842_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1498846_1499515_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1499671_1503493_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_154698391.1|1503647_1503806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930800.1|1503823_1504774_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1504795_1505941_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1506089_1507019_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1507015_1508104_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1508100_1508904_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1508900_1509632_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1509689_1510979_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1511075_1511678_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1516230_1516569_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1517276_1517543_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1519249_1520200_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1520196_1521528_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1522788_1524789_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1524781_1525423_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1525419_1525827_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1525823_1526624_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1526698_1527403_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1527434_1528229_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_005013747.1|1528225_1529176_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|1529274_1530225_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1530323_1530758_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1530840_1533177_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1533368_1534385_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	1581779	1662654	4108502	transposase,tRNA	Bacillus_virus(25.0%)	59	NA	NA
WP_010927663.1|1581779_1582730_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1582726_1583677_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931069.1|1583937_1584966_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1585045_1586344_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1586340_1586922_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1587234_1591281_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_062826587.1|1591521_1599183_+	hemagglutinin repeat-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1599179_1600130_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931065.1|1601269_1601743_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931064.1|1601882_1602503_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931063.1|1602638_1603439_+	aldolase	NA	NA	NA	NA	NA
WP_003810897.1|1603493_1604585_+	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA	NA
WP_010931062.1|1604606_1605050_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_010931061.1|1605078_1605711_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_003810909.1|1605821_1606238_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931060.1|1606230_1606923_+	DUF2238 domain-containing protein	NA	NA	NA	NA	NA
WP_010931059.1|1607029_1607404_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_010931058.1|1607480_1608290_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931057.1|1608385_1609330_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_003816577.1|1609368_1610340_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003810921.1|1610430_1610868_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443733.1|1610926_1611808_-	NRDE family protein	NA	NA	NA	NA	NA
WP_010931054.1|1612811_1613672_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931053.1|1613704_1615087_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	28.4	7.9e-30
WP_010931052.1|1615083_1616103_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247407.1|1616475_1616970_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931051.1|1616977_1617718_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931050.1|1617798_1619403_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_010931049.1|1619442_1620231_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.4	2.0e-22
WP_010931048.1|1621433_1622522_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	9.7e-15
WP_010931047.1|1623402_1624215_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_004568502.1|1624227_1624536_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_010931046.1|1624653_1626384_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019249399.1|1626385_1627531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931044.1|1627660_1628329_-	DUF502 domain-containing protein	NA	NA	NA	NA	NA
WP_003810957.1|1628450_1628918_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247521.1|1629053_1630436_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_014486086.1|1630432_1631557_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_010931042.1|1631553_1634190_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010931070.1|1634605_1635556_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1639302_1639914_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1640136_1641597_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1641693_1643286_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1643639_1643897_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1643898_1645239_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1645334_1646024_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1646036_1647467_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1649191_1650013_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1650023_1651595_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1651623_1652601_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1652627_1653431_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1653427_1654222_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1654229_1655465_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1655457_1655892_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1656641_1657592_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1658213_1659941_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1660052_1661411_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_023853289.1|1661467_1661686_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1661703_1662654_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	2076000	2133279	4108502	transposase,tRNA	Klosneuvirus(15.38%)	49	NA	NA
WP_010930522.1|2076000_2076951_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930804.1|2077049_2079650_-	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_003818658.1|2079756_2080761_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930803.1|2080869_2082210_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818661.1|2082250_2083279_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930802.1|2083474_2084020_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930801.1|2084016_2084577_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930048.1|2084675_2085626_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930523.1|2085663_2086251_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_003811007.1|2086268_2086652_-	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_003811011.1|2088011_2089304_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_010930524.1|2089438_2090479_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_010929632.1|2090576_2091593_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003811015.1|2091860_2092508_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930526.1|2092633_2093392_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_019247478.1|2093376_2094156_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_003811022.1|2094173_2095058_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019248494.1|2095054_2095834_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_010930528.1|2095938_2096538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930529.1|2096826_2097579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816525.1|2097697_2099098_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_003816523.1|2099121_2099520_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003811035.1|2099695_2099896_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_010930530.1|2100034_2100763_+	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003816520.1|2100896_2102312_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_003816518.1|2102315_2103179_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_004568486.1|2103191_2103941_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_019247881.1|2104123_2106139_+	SurA N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_019247882.1|2106120_2106789_-	arylesterase	NA	NA	NA	NA	NA
WP_005012067.1|2107563_2108514_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813572.1|2108662_2109001_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003813570.1|2109058_2109220_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813568.1|2109251_2109452_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010930533.1|2109717_2112291_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_019247811.1|2112361_2114911_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930535.1|2117461_2117950_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2118041_2119193_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_004566336.1|2119246_2120068_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2120106_2121336_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566334.1|2121464_2121905_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|2122015_2122966_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930538.1|2122962_2123436_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446178.1|2123597_2124536_+	membrane protein	NA	NA	NA	NA	NA
WP_010930540.1|2124537_2125746_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_010930541.1|2125850_2126357_-	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930542.1|2126359_2129221_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930543.1|2129210_2130176_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930544.1|2130928_2132230_+	RsmB/NOP family class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|2132328_2133279_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	2184528	2243798	4108502	protease,transposase,tRNA	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|2184528_2185479_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2185603_2186413_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929577.1|2186613_2187564_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|2188837_2190055_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|2191111_2192014_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|2192090_2192963_+	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|2193093_2193462_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|2193519_2194566_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|2194761_2196018_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|2196022_2197360_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|2197509_2198466_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|2198568_2199501_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|2199616_2199937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247553.1|2199929_2200289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|2200336_2201911_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|2201963_2202908_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|2202925_2203756_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|2203748_2205383_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|2205379_2206735_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|2207641_2209219_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|2209222_2210497_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|2210594_2210969_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|2212684_2213818_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|2213855_2214461_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|2214457_2215276_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|2215347_2217972_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|2217958_2218213_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|2218279_2218861_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|2219164_2219425_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|2219590_2220214_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|2220213_2220987_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|2220983_2222192_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|2222217_2222691_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|2222764_2223715_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|2223813_2224764_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|2224862_2226212_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|2226977_2227733_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|2227825_2230708_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|2231030_2231456_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|2231483_2232632_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|2232628_2233135_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930793.1|2233141_2234437_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_023995843.1|2234495_2235782_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|2235783_2236422_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_077069010.1|2236424_2237585_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|2237611_2238967_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|2238970_2240041_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|2240179_2240416_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|2240503_2241610_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|2241575_2242880_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|2242898_2243798_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 16
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	2254038	2311535	4108502	transposase	Staphylococcus_phage(16.67%)	57	NA	NA
WP_005013747.1|2254038_2254989_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|2255188_2256274_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|2256289_2257051_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_170954295.1|2257047_2258007_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.7e-23
WP_010930780.1|2258069_2258570_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|2258602_2259346_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|2259441_2259681_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|2259694_2259847_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|2259932_2261423_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|2261514_2262453_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|2262449_2262626_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|2262628_2263291_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|2264912_2265056_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|2265052_2266027_-	membrane protein	NA	NA	NA	NA	NA
WP_162268682.1|2265921_2266176_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2266193_2267144_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|2267140_2268415_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|2268518_2269712_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|2269708_2270362_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|2270358_2271795_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|2271782_2272142_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162268681.1|2272956_2273097_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2273114_2274065_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|2275110_2276976_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|2277233_2278754_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|2278841_2279492_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930766.1|2280440_2281736_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|2281757_2282642_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|2282740_2283616_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|2283605_2283962_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|2284092_2285067_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2285196_2285376_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|2285473_2285998_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|2286008_2286845_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|2286957_2287329_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|2287325_2287877_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|2287892_2289584_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|2289632_2290313_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|2290560_2291025_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2291194_2292124_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|2292136_2292784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|2292857_2294675_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|2294758_2295709_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2296361_2297312_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812199.1|2297330_2297678_-	GFA family protein	NA	NA	NA	NA	NA
WP_010930755.1|2297706_2299146_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_010930754.1|2299164_2299560_-	VOC family protein	NA	NA	NA	NA	NA
WP_003812191.1|2299734_2300343_+	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930753.1|2300355_2301174_+	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_010930752.1|2301125_2302100_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812183.1|2302128_2303190_-	XdhC family protein	NA	NA	NA	NA	NA
WP_010930751.1|2303186_2305403_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_010930750.1|2305416_2305875_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_003812179.1|2306032_2306377_-	exported protein	NA	NA	NA	NA	NA
WP_010930749.1|2306533_2307439_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930748.1|2307525_2308539_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010930153.1|2310518_2311535_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	2327091	2391460	4108502	transposase	Vibrio_phage(20.0%)	51	NA	NA
WP_005013747.1|2327091_2328042_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015810.1|2328263_2329214_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852887.1|2329312_2330278_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930740.1|2330415_2331315_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930739.1|2333909_2335397_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_014486081.1|2335407_2336604_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_003816680.1|2336676_2337996_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010930737.1|2337992_2338868_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930736.1|2338898_2340047_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930735.1|2340064_2340379_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_003816687.1|2340400_2341123_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003816690.1|2341122_2341941_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816691.1|2341945_2342473_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_010930733.1|2342478_2343735_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930732.1|2344093_2345233_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930731.1|2345310_2346183_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_005013747.1|2347053_2348004_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930729.1|2347963_2348599_-	membrane protein	NA	NA	NA	NA	NA
WP_010930728.1|2348958_2350281_-	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930727.1|2350599_2351421_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_003810356.1|2352845_2353418_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930726.1|2353457_2355287_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010930725.1|2355249_2356308_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930724.1|2356345_2356807_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_003810344.1|2356891_2357638_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_019247651.1|2359128_2362359_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_019248531.1|2362425_2363757_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930721.1|2364009_2364384_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2364486_2365665_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_003810329.1|2365675_2366266_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003818535.1|2366376_2367183_+	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_010930719.1|2367208_2368003_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_010930718.1|2369003_2369978_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2370136_2370649_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_003818532.1|2370805_2371777_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930717.1|2373521_2374328_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930716.1|2374324_2375626_-	malonyl-CoA decarboxylase family protein	NA	NA	NA	NA	NA
WP_010930715.1|2375576_2376341_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930714.1|2376454_2377225_-	spermidine synthase	NA	NA	NA	NA	NA
WP_010930713.1|2377309_2378497_-	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_003818524.1|2378569_2378944_-	tautomerase family protein	NA	NA	NA	NA	NA
WP_003810308.1|2379044_2380307_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003810306.1|2380303_2381161_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003818523.1|2381333_2382335_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2382786_2383737_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930712.1|2385252_2386452_+	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_003810297.1|2386820_2387057_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930711.1|2387120_2387288_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_010930710.1|2387401_2389207_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
WP_062826579.1|2389460_2390411_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|2390509_2391460_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	2577928	2631507	4108502	transposase,tRNA	Yellowstone_lake_phycodnavirus(14.29%)	45	NA	NA
WP_005013747.1|2577928_2578879_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811701.1|2578995_2579715_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930605.1|2579887_2580874_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930604.1|2580874_2581357_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_003811706.1|2581360_2582644_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003811709.1|2582640_2583579_+	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_010930603.1|2583575_2585285_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_010930602.1|2585294_2586542_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_003811716.1|2588152_2589442_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_020699606.1|2590579_2591338_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	6.7e-31
WP_010930601.1|2592014_2592758_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930600.1|2592832_2593573_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930599.1|2593768_2594605_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930598.1|2594655_2595426_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930597.1|2595475_2596528_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_003811733.1|2596524_2597151_-	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_010930596.1|2597147_2598182_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_010930595.1|2598360_2599377_+	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_005012067.1|2599475_2600426_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2600524_2601475_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930797.1|2604215_2605505_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930798.1|2605623_2606061_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930799.1|2606104_2607313_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_003810867.1|2607459_2607924_+	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_014905945.1|2607947_2608898_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930521.1|2609882_2610656_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930520.1|2610652_2611651_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930519.1|2611735_2612512_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
WP_010930518.1|2612667_2614272_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.2e-53
WP_003816541.1|2614652_2615777_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810992.1|2615903_2616527_+	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_010930517.1|2616523_2618425_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930516.1|2618473_2619268_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930515.1|2619280_2620282_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_004568494.1|2620278_2620785_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
WP_010930513.1|2620777_2621626_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_019247780.1|2621723_2622266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2622309_2623260_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930511.1|2623415_2623742_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003810975.1|2623738_2624023_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930510.1|2624019_2624499_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_004568496.1|2624495_2626124_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_003810969.1|2626120_2626465_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_010930509.1|2626464_2629398_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010929588.1|2630556_2631507_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	2661116	2732270	4108502	transposase	Tetraselmis_virus(10.0%)	55	NA	NA
WP_005012067.1|2661116_2662067_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852967.1|2662619_2664245_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_010930475.1|2664294_2665329_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_010930476.1|2665331_2666678_-	BatD family protein	NA	NA	NA	NA	NA
WP_010930477.1|2666674_2668189_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|2668179_2669190_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930479.1|2669663_2670605_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930480.1|2670613_2671582_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930481.1|2673121_2674090_+	transporter	NA	NA	NA	NA	NA
WP_010930482.1|2674267_2675257_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010926609.1|2675303_2676062_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930483.1|2676251_2676989_+	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_005012808.1|2677087_2678038_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816696.1|2678222_2679005_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_003810743.1|2678998_2679700_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003810741.1|2679939_2680542_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|2681868_2682819_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486074.1|2682815_2684372_-	LTA synthase family protein	NA	NA	NA	NA	NA
WP_010930486.1|2684364_2685138_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005013747.1|2685196_2686147_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852812.1|2686228_2687404_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_010930473.1|2687417_2689475_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930472.1|2689471_2690497_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010930471.1|2690508_2691798_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930470.1|2691820_2692918_-	capsular polysaccharide export protein	NA	NA	NA	NA	NA
WP_003811224.1|2692914_2693805_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930469.1|2693801_2695886_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_010930468.1|2695917_2697087_-	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_014486073.1|2697128_2697869_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010930466.1|2697868_2698639_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247171.1|2698963_2699131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930465.1|2699494_2700280_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
WP_010930464.1|2700306_2702391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247170.1|2702558_2704514_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_003811209.1|2704837_2705338_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
WP_010930461.1|2705436_2706963_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930460.1|2707100_2707988_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811203.1|2708002_2708956_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
WP_033446218.1|2709007_2711098_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_010930458.1|2711113_2711500_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_010930457.1|2714193_2714997_-	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
WP_010930456.1|2716290_2717193_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811187.1|2717257_2718034_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_010930455.1|2718355_2719405_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930454.1|2719528_2721199_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_019248220.1|2721203_2721998_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
WP_005012067.1|2722096_2723047_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930453.1|2723066_2723972_-	pirin family protein	NA	NA	NA	NA	NA
WP_003811176.1|2724049_2724748_-	pirin family protein	NA	NA	NA	NA	NA
WP_010930452.1|2724907_2725852_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930451.1|2725861_2727349_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_003811167.1|2727348_2728416_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811164.1|2728479_2729892_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_010930450.1|2730077_2731298_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_005012808.1|2731319_2732270_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	2829146	2887927	4108502	transposase,tRNA	Planktothrix_phage(28.57%)	50	NA	NA
WP_003812608.1|2829146_2831096_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
WP_019248759.1|2831483_2832260_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003812612.1|2832265_2832658_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2833079_2834030_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930389.1|2834026_2835124_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
WP_076879548.1|2835155_2836106_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814009.1|2837887_2839129_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2839140_2839914_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2839940_2840891_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2841370_2842027_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2842041_2843709_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2843711_2844341_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2844552_2845647_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2845791_2846604_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2846607_2848311_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2848361_2849492_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2849678_2850755_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2850836_2851487_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2851501_2852905_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2853188_2854007_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930378.1|2854003_2854708_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2855607_2856723_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2856756_2857131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2857153_2858311_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2858323_2858557_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2859191_2862161_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2862175_2862385_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2862536_2863166_-	molecular chaperone TorD family protein	NA	NA	NA	NA	NA
WP_010930373.1|2863162_2865253_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2865276_2865957_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2865953_2866514_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2866520_2867618_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2867770_2868364_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2868360_2869653_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2869666_2870209_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2870218_2871055_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2871088_2872150_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2872191_2873244_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2873259_2873562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2873703_2874654_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268680.1|2874671_2874836_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2874832_2876527_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2876523_2877609_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2877656_2878556_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2878566_2879211_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2880232_2883475_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2883485_2884640_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2884866_2885829_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_076879624.1|2885927_2886878_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2886976_2887927_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	2941513	3008013	4108502	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2941513_2942464_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2942833_2943406_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2943408_2944419_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2944411_2944912_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2944922_2945264_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2945275_2946067_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2946083_2946353_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2946375_2947164_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2947210_2948227_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2948443_2949886_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2950064_2951684_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2951804_2953625_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2953703_2955236_-	flagellar hook-associated protein FlgL	NA	NA	NA	NA	NA
WP_010930329.1|2955269_2956916_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2956985_2958008_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2958025_2959159_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2959161_2959851_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2959850_2960636_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2960679_2961444_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2961482_2962904_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2962969_2963674_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2963721_2964141_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2964153_2964561_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2964744_2965455_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2965581_2965872_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2965889_2966372_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2970877_2972032_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010929632.1|2972337_2973354_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2973600_2974389_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2974455_2975136_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2975132_2975903_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2976001_2976952_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2977007_2977925_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2977935_2979114_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2979133_2980129_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2981717_2982326_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2982313_2983354_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2983371_2984334_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2984330_2985524_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2985520_2986318_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2986343_2987330_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2987348_2989388_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010930315.1|2989589_2990270_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2990283_2991195_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2991191_2991770_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2991908_2992814_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2992821_2996241_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2996228_2998829_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2999784_3000417_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|3000810_3001569_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_003811370.1|3001565_3002768_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|3002955_3003906_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|3004813_3005959_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|3005945_3006701_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|3006817_3006997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|3007062_3008013_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	3191465	3343113	4108502	transposase,holin,tRNA	uncultured_Mediterranean_phage(15.79%)	119	NA	NA
WP_010929956.1|3191465_3192416_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813574.1|3192514_3193396_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003821443.1|3193473_3194853_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930218.1|3194891_3195737_-	FTR1 family protein	NA	NA	NA	NA	NA
WP_003813580.1|3195752_3196097_-	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930217.1|3196099_3196636_-	iron transporter	NA	NA	NA	NA	NA
WP_003813585.1|3196808_3197384_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_003813586.1|3197486_3198224_-	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_010930216.1|3198291_3199929_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_019247742.1|3200036_3200792_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930214.1|3200779_3201742_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_003813594.1|3201843_3202644_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930213.1|3202705_3204781_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_010930212.1|3204945_3207321_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930211.1|3207401_3208757_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|3210235_3210958_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|3211012_3211996_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3212125_3213076_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|3213072_3213975_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|3214062_3214821_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|3214833_3215925_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|3216022_3217450_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|3217679_3218894_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|3218939_3221810_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|3224220_3224709_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|3224834_3227531_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|3227685_3229968_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_019248935.1|3230141_3230765_+	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930198.1|3230863_3231814_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|3231860_3232415_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|3232482_3233328_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|3233397_3234366_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930196.1|3238061_3241988_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930194.1|3242723_3245954_-	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010928340.1|3246235_3247063_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_003812422.1|3247096_3247792_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_019247537.1|3247784_3249065_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930192.1|3249074_3250052_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930191.1|3250033_3251734_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010926448.1|3251836_3252940_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010926447.1|3252970_3253726_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930190.1|3253732_3255253_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|3255295_3255598_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|3255594_3256227_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|3256305_3258171_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|3258167_3258962_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930186.1|3258990_3260106_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|3261010_3261889_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|3261888_3262713_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|3262880_3263831_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|3264043_3266893_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|3266874_3267603_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|3267743_3269207_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|3269203_3269575_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|3269592_3270906_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|3270942_3271401_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_155120815.1|3271355_3271496_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3271513_3272464_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3272562_3273513_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|3273509_3274523_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|3274662_3275649_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|3276007_3276715_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3277295_3278246_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|3278397_3279000_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|3279018_3279651_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|3279695_3279947_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|3279888_3281775_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930173.1|3281793_3282636_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_003819875.1|3282632_3283991_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_003809629.1|3284211_3285006_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930172.1|3285236_3286730_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_010930171.1|3286965_3289047_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_014486066.1|3289241_3290282_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930169.1|3290416_3291433_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_003809638.1|3291454_3292312_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930167.1|3292356_3293133_+	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_154698393.1|3293345_3293483_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|3293500_3294451_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|3294477_3294942_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|3296148_3298437_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|3298553_3299426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|3299468_3300623_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|3300657_3301488_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_023853525.1|3301571_3303116_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|3303158_3303518_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|3303519_3303933_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|3303973_3304291_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|3304375_3305092_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|3305355_3306777_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_019248433.1|3306843_3309591_-	pertactin autotransporter	NA	NA	NA	NA	NA
WP_023853536.1|3309923_3310940_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|3311275_3311917_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|3312007_3313444_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|3313601_3314675_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010930155.1|3314671_3315808_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_003809416.1|3315952_3316297_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930154.1|3316363_3318244_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809411.1|3318293_3319229_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010929632.1|3319561_3320578_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|3321515_3322943_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|3322939_3323962_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|3323951_3324425_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|3324565_3325453_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|3325449_3327093_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930148.1|3327089_3328139_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_023853536.1|3328927_3329944_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|3330043_3330676_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|3330684_3331074_-	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|3331126_3332179_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_010930145.1|3333042_3334749_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_003811919.1|3334822_3335323_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3335337_3337395_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3337421_3337715_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3337816_3338764_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3338776_3339652_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3339772_3340333_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3340367_3340691_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3341126_3341864_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3342162_3343113_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	3364064	3436558	4108502	transposase	Bacillus_virus(16.67%)	58	NA	NA
WP_010929584.1|3364064_3365015_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3365057_3366233_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3366454_3368245_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3368257_3369919_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3369931_3372637_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3372929_3374684_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3374680_3375307_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3375303_3376155_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_019248379.1|3376230_3378345_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930124.1|3378531_3379146_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3379291_3379543_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3379612_3380995_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3380991_3384171_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|3384978_3385896_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3385947_3386679_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3386738_3387311_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3388819_3389836_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3389973_3391023_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3391127_3392078_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|3392173_3392899_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|3393109_3393490_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|3393795_3394668_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|3394675_3395056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|3395209_3396484_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|3397971_3398880_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|3399677_3400742_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_170954292.1|3402578_3403580_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|3403802_3404444_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|3404526_3406353_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|3406596_3407526_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|3407525_3408275_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|3408346_3409261_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|3409280_3410426_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|3410486_3411398_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_005012067.1|3411478_3412429_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446303.1|3412527_3413112_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003821513.1|3413146_3414136_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_010930105.1|3414132_3415074_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_010930104.1|3415070_3416291_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930103.1|3416333_3416648_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930102.1|3416839_3417199_-	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930101.1|3417200_3418916_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930100.1|3419103_3419775_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930099.1|3419789_3421118_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930098.1|3421114_3422014_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930097.1|3422100_3423186_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930096.1|3423178_3424312_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930095.1|3424311_3426993_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930094.1|3427363_3427945_+	OmpA family protein	NA	NA	NA	NA	NA
WP_010930093.1|3428070_3428796_+	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930092.1|3428792_3429470_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930091.1|3429685_3430867_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930090.1|3431639_3431822_+	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_005012808.1|3431851_3432802_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566317.1|3432931_3433324_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3433600_3434512_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3434636_3435611_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3435607_3436558_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	3450065	3504632	4108502	transposase,holin	Bacillus_phage(33.33%)	45	NA	NA
WP_010930066.1|3450065_3451016_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3451128_3451380_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3451885_3453004_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3453123_3453336_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3453495_3453717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|3453769_3454720_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3455896_3457267_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3457299_3458091_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3458103_3459159_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3459184_3460060_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3460165_3460414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3460448_3461903_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3461899_3462421_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3462449_3463802_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_029444137.1|3464025_3466914_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930056.1|3469058_3470360_+	phospholipase A	NA	NA	NA	NA	NA
WP_010930055.1|3470374_3471091_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3471372_3472053_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_003809770.1|3472064_3472232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852837.1|3472340_3472487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930052.1|3472580_3473240_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3473638_3475471_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3475467_3476418_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814007.1|3477581_3479297_+	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_003814006.1|3479307_3479799_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_010930015.1|3479871_3480888_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814004.1|3481055_3481835_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003814003.1|3481853_3482381_-	lipoprotein	NA	NA	NA	NA	NA
WP_003814002.1|3482674_3482944_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003821234.1|3483034_3485194_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814000.1|3485314_3486034_+	lipoprotein	NA	NA	NA	NA	NA
WP_005013747.1|3486030_3486981_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3487079_3488030_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813999.1|3488170_3489388_+	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_010930016.1|3489381_3489993_-	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813997.1|3490626_3491604_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_003813996.1|3491747_3492494_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_010930017.1|3492515_3492962_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_010930018.1|3493749_3495981_+|holin	choline BCCT transporter BetT	holin	NA	NA	NA	NA
WP_003813993.1|3496003_3496804_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813992.1|3497085_3498318_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813991.1|3498428_3499418_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|3499448_3500837_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813988.1|3502435_3503419_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023994644.1|3503615_3504632_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	3569090	3642252	4108502	transposase	Klosneuvirus(16.67%)	57	NA	NA
WP_041337087.1|3569090_3570041_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3570037_3571057_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3571066_3573775_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3573922_3574579_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3574677_3575628_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998705.1|3575775_3576669_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3576868_3578563_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3578597_3579524_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3579592_3580690_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3580708_3581572_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3581583_3582366_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3582362_3583481_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3583477_3585010_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3585050_3586058_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3586202_3586925_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3586940_3587963_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3588279_3589014_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3589098_3590844_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3590840_3591593_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3591637_3592594_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3592682_3593249_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3593256_3594117_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_020699739.1|3594146_3594875_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
WP_003807497.1|3594906_3595590_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3596427_3597342_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3597406_3598315_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3598405_3599830_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3599831_3601154_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3601150_3603289_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3603366_3608487_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3608587_3608896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3608965_3609523_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3609538_3611020_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929992.1|3613190_3614528_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3614562_3616560_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3616577_3618626_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3618756_3619623_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3619891_3620857_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3620971_3622120_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_003807462.1|3622544_3622856_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3622889_3623150_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3623299_3624433_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3624503_3625640_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3625805_3626600_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3626662_3627106_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3627221_3628172_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929985.1|3628273_3628702_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929984.1|3628774_3630970_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3631191_3632142_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3632101_3632626_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3632757_3633729_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3633848_3636293_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3636308_3636899_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3637142_3638093_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814462.1|3638250_3639516_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003814461.1|3639549_3640647_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_005013747.1|3641301_3642252_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_LT906471	Bordetella pertussis strain NCTC13666 chromosome 1	4108502	3653539	3753652	4108502	protease,tRNA,transposase,tail,terminase	uncultured_Caudovirales_phage(14.29%)	108	NA	NA
WP_005012067.1|3653539_3654490_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3655221_3655599_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3655583_3656285_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3656428_3657121_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3657120_3658224_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3658333_3660706_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3660702_3662262_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3662286_3663084_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3663115_3664261_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3664365_3665808_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3665810_3667040_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3669177_3670128_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247922.1|3671257_3671815_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3671790_3672141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3672309_3673104_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3673100_3674150_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3674149_3674839_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3674925_3675423_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3675454_3676771_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3676787_3677762_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3677798_3678257_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3678256_3678937_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3678939_3679368_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3679420_3681151_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3681216_3681789_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3681769_3682456_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3682811_3683483_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3683811_3684033_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3684032_3684314_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3684310_3684826_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3684825_3685377_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3685355_3685598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3685602_3686415_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3686414_3686678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3686718_3686916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3686896_3687313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3687317_3691274_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3691266_3691656_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3691652_3692186_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3692253_3692613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3692622_3695235_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3695260_3695551_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3695568_3695898_-|tail	phage tail assembly chaperone	tail	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3695907_3696426_-|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3696680_3697181_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3697188_3697611_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3697607_3698006_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3698002_3698398_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_162096760.1|3698397_3698586_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3698599_3699082_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3699144_3699396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3700070_3701021_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3701449_3702052_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3702174_3702417_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3702422_3703478_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3703506_3704925_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3704927_3706205_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3706191_3706677_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3707316_3708267_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853183.1|3708284_3708506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_161633094.1|3708523_3709213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3709205_3709457_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931451.1|3710011_3710623_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3710694_3710901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3711152_3712103_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3712201_3713275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3713442_3714237_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3714276_3714801_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3714793_3716536_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3716745_3717504_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3717506_3718214_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3718230_3719112_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3719122_3719881_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3719849_3720605_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3720674_3722093_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3722114_3722765_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3722898_3723234_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_010930800.1|3723322_3724273_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3724349_3726170_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3726174_3727248_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3727370_3728339_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3728412_3729324_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3729342_3729915_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3729995_3730544_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3730543_3732133_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3732202_3732442_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_023995141.1|3732482_3733508_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3733573_3734755_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3734851_3735304_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3735313_3736654_-	aminopeptidase P N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_010931461.1|3736970_3738008_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3738389_3738749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3738832_3739774_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3739848_3740799_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3741092_3742187_+	porin	NA	NA	NA	NA	NA
WP_003814205.1|3742268_3743150_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3743171_3744011_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3744086_3745604_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3745700_3746801_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3746817_3747240_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_003814195.1|3747262_3747475_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3747521_3748442_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_010931455.1|3748624_3749374_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3749376_3749706_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931454.1|3749912_3751346_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814185.1|3751357_3751741_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3751802_3752603_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_005015810.1|3752701_3753652_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
