assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900185255.1_NN2	NZ_LT883143	Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) chromosome I	1	388161-388274	1	CRISPRCasFinder	no		cas3,csa3,WYL,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,csx1	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,csx1	NA,NA|168aa|down_2|NZ_LT883143.1_392846_393350_-,NA|251aa|down_5|NZ_LT883143.1_395103_395856_-,NA|185aa|down_7|NZ_LT883143.1_396624_397179_-	NA|293aa|up_9|NZ_LT883143.1_375009_375888_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|NZ_LT883143.1_376050_376716_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|NZ_LT883143.1_376776_377838_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|NZ_LT883143.1_378093_379470_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|NZ_LT883143.1_379748_380501_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|NZ_LT883143.1_380541_381900_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|NZ_LT883143.1_381965_383336_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|NZ_LT883143.1_383451_384555_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|NZ_LT883143.1_384973_386071_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|NZ_LT883143.1_386125_387280_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|NZ_LT883143.1_389317_391705_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|NZ_LT883143.1_391815_392868_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_2|NZ_LT883143.1_392846_393350_-	NA	NA|204aa|down_3|NZ_LT883143.1_393454_394066_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_4|NZ_LT883143.1_394064_395084_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_5|NZ_LT883143.1_395103_395856_-	NA	NA|233aa|down_6|NZ_LT883143.1_395904_396603_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_7|NZ_LT883143.1_396624_397179_-	NA	NA|165aa|down_8|NZ_LT883143.1_397444_397939_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|231aa|down_9|NZ_LT883143.1_397943_398636_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_900185255.1_NN2	NZ_LT883143	Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) chromosome I	2	1598518-1599266	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,WYL,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,csx1	Orphan	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	12,12,12	12	Orphan	cas3,csa3,WYL,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,csx1	NA|105aa|up_0|NZ_LT883143.1_1597931_1598246_+,NA|141aa|down_0|NZ_LT883143.1_1600143_1600566_-,NA|59aa|down_5|NZ_LT883143.1_1603743_1603920_-	NA|329aa|up_9|NZ_LT883143.1_1587647_1588634_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|110aa|up_8|NZ_LT883143.1_1588650_1588980_-	pfam06942, GlpM, GlpM protein	NA|513aa|up_7|NZ_LT883143.1_1589112_1590651_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|252aa|up_6|NZ_LT883143.1_1590929_1591685_-	PRK10906, PRK10906, DeoR/GlpR family transcriptional regulator	NA|506aa|up_5|NZ_LT883143.1_1591890_1593408_-	PRK00047, glpK, glycerol kinase GlpK	NA|280aa|up_4|NZ_LT883143.1_1593447_1594287_-	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|157aa|up_3|NZ_LT883143.1_1594551_1595022_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|495aa|up_2|NZ_LT883143.1_1595085_1596570_+	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases	NA|262aa|up_1|NZ_LT883143.1_1596765_1597551_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|105aa|up_0|NZ_LT883143.1_1597931_1598246_+	NA	NA|141aa|down_0|NZ_LT883143.1_1600143_1600566_-	NA	NA|177aa|down_1|NZ_LT883143.1_1600664_1601195_-	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|66aa|down_2|NZ_LT883143.1_1601377_1601575_+	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|213aa|down_3|NZ_LT883143.1_1601553_1602192_-	PRK09975, PRK09975, DNA-binding transcriptional regulator EnvR; Provisional	NA|393aa|down_4|NZ_LT883143.1_1602557_1603736_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|59aa|down_5|NZ_LT883143.1_1603743_1603920_-	NA	NA|308aa|down_6|NZ_LT883143.1_1604046_1604970_-	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain	NA|498aa|down_7|NZ_LT883143.1_1605101_1606595_+	TIGR01722, Methylmalonate-semialdehyde_dehydrogenase, methylmalonic acid semialdehyde dehydrogenase	NA|299aa|down_8|NZ_LT883143.1_1606610_1607507_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|629aa|down_9|NZ_LT883143.1_1607608_1609495_+	cd05967, PrpE, Propionyl-CoA synthetase (PrpE)
GCF_900185255.1_NN2	NZ_LT883143	Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) chromosome I	3	1972545-1972646	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,WYL,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,csx1	Unclear	GCGGCGGGTATCGGCGGATAACGCC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,csx1	NA|454aa|up_7|NZ_LT883143.1_1964676_1966038_-,NA|106aa|down_6|NZ_LT883143.1_1978890_1979208_+	NA|286aa|up_9|NZ_LT883143.1_1962871_1963729_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|268aa|up_8|NZ_LT883143.1_1963869_1964673_-	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]	NA|454aa|up_7|NZ_LT883143.1_1964676_1966038_-	NA	NA|74aa|up_6|NZ_LT883143.1_1966180_1966402_-	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|286aa|up_5|NZ_LT883143.1_1966705_1967563_+	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold	NA|104aa|up_4|NZ_LT883143.1_1967780_1968092_+	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|552aa|up_3|NZ_LT883143.1_1968088_1969744_+	PRK09395, actP, cation/acetate symporter ActP	NA|600aa|up_2|NZ_LT883143.1_1969833_1971633_+	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	DEDDh|209aa|up_1|NZ_LT883143.1_1971629_1972256_+	PRK09145, PRK09145, 3'-5' exonuclease	NA|53aa|up_0|NZ_LT883143.1_1972364_1972523_+	pfam11752, DUF3309, Protein of unknown function (DUF3309)	NA|375aa|down_0|NZ_LT883143.1_1972782_1973907_+	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown]	NA|89aa|down_1|NZ_LT883143.1_1973939_1974206_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|611aa|down_2|NZ_LT883143.1_1974487_1976320_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|188aa|down_3|NZ_LT883143.1_1976382_1976946_-	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|276aa|down_4|NZ_LT883143.1_1976927_1977755_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|310aa|down_5|NZ_LT883143.1_1977761_1978691_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|106aa|down_6|NZ_LT883143.1_1978890_1979208_+	NA	NA|214aa|down_7|NZ_LT883143.1_1979354_1979996_+	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|300aa|down_8|NZ_LT883143.1_1980100_1981000_-	pfam00892, EamA, EamA-like transporter family	NA|112aa|down_9|NZ_LT883143.1_1981009_1981345_-	PRK10089, PRK10089, chaperone CsaA
GCF_900185255.1_NN2	NZ_LT883143	Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) chromosome I	4	3055329-3056494	2,4,2	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas3,csa3,WYL,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,csx1	Type I-F	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	17,19,19	19	TypeI-F	cas3,csa3,WYL,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,csx1	NA|82aa|up_7|NZ_LT883143.1_3035177_3035423_-,NA|266aa|up_1|NZ_LT883143.1_3053066_3053864_-,NA|105aa|down_6|NZ_LT883143.1_3066196_3066511_-	NA|70aa|up_9|NZ_LT883143.1_3033930_3034140_+	pfam07869, DUF1656, Protein of unknown function (DUF1656)	NA|335aa|up_8|NZ_LT883143.1_3034136_3035141_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|82aa|up_7|NZ_LT883143.1_3035177_3035423_-	NA	NA|305aa|up_6|NZ_LT883143.1_3035684_3036599_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|338aa|up_5|NZ_LT883143.1_3036771_3037785_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|188aa|up_4|NZ_LT883143.1_3037861_3038425_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_3|NZ_LT883143.1_3039068_3039833_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4343aa|up_2|NZ_LT883143.1_3039905_3052934_+	PRK05691, PRK05691, peptide synthase; Validated	NA|266aa|up_1|NZ_LT883143.1_3053066_3053864_-	NA	NA|171aa|up_0|NZ_LT883143.1_3054421_3054934_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|down_0|NZ_LT883143.1_3056618_3057182_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|down_1|NZ_LT883143.1_3057185_3058214_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|down_2|NZ_LT883143.1_3058224_3059208_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|434aa|down_3|NZ_LT883143.1_3059194_3060496_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|down_4|NZ_LT883143.1_3060906_3064137_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|down_5|NZ_LT883143.1_3064133_3065108_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_6|NZ_LT883143.1_3066196_3066511_-	NA	NA|307aa|down_7|NZ_LT883143.1_3066871_3067792_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|462aa|down_8|NZ_LT883143.1_3067824_3069210_-	pfam03573, OprD, outer membrane porin, OprD family	NA|209aa|down_9|NZ_LT883143.1_3069319_3069946_-	cd01012, YcaC_related, YcaC related amidohydrolases; E
GCF_900185255.1_NN2	NZ_LT883143	Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) chromosome I	5	3065360-3065927	3,5,3	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas3,csa3,WYL,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,csx1	Type I-F	GTTCACTGCCGTGTAGGCAGCTAAGAAA,TTTCTTAGCTGCCTACACGGCAGTGAAC,TTTCTTAGCTGCCTACACGGCAGTGAAC	28,28,28	1	1	3065568-3065599	NZ_LT883143.1_5580034-5580065	I-F:I-F:I-F	9,9,9	9	TypeI-F	cas3,csa3,WYL,DEDDh,PD-DExK,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,csx1	NA|266aa|up_7|NZ_LT883143.1_3053066_3053864_-,NA|105aa|down_0|NZ_LT883143.1_3066196_3066511_-	NA|255aa|up_9|NZ_LT883143.1_3039068_3039833_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4343aa|up_8|NZ_LT883143.1_3039905_3052934_+	PRK05691, PRK05691, peptide synthase; Validated	NA|266aa|up_7|NZ_LT883143.1_3053066_3053864_-	NA	NA|171aa|up_6|NZ_LT883143.1_3054421_3054934_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|up_5|NZ_LT883143.1_3056618_3057182_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|up_4|NZ_LT883143.1_3057185_3058214_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|up_3|NZ_LT883143.1_3058224_3059208_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|434aa|up_2|NZ_LT883143.1_3059194_3060496_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|up_1|NZ_LT883143.1_3060906_3064137_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|up_0|NZ_LT883143.1_3064133_3065108_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_0|NZ_LT883143.1_3066196_3066511_-	NA	NA|307aa|down_1|NZ_LT883143.1_3066871_3067792_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|462aa|down_2|NZ_LT883143.1_3067824_3069210_-	pfam03573, OprD, outer membrane porin, OprD family	NA|209aa|down_3|NZ_LT883143.1_3069319_3069946_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|227aa|down_4|NZ_LT883143.1_3070000_3070681_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|287aa|down_5|NZ_LT883143.1_3070778_3071639_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|313aa|down_6|NZ_LT883143.1_3071739_3072678_+	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional	NA|142aa|down_7|NZ_LT883143.1_3073198_3073624_+	COG4244, COG4244, Predicted membrane protein [Function unknown]	NA|440aa|down_8|NZ_LT883143.1_3073616_3074936_+	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]	NA|470aa|down_9|NZ_LT883143.1_3075114_3076524_+	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
