The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT883143	Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) chromosome I	6902967	686344	740876	6902967	tail,tRNA,holin	Pseudomonas_phage(53.85%)	57	NA	NA
WP_023086927.1|686344_687370_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.1	2.4e-108
WP_003085061.1|687448_688018_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003099587.1|688101_688455_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_003099585.1|688445_688988_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_003099584.1|688960_690193_-	multifunctional CCA addition/repair protein	NA	A0A076G5T8	Escherichia_phage	43.1	2.6e-77
WP_009875777.1|690236_690743_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003099581.1|690836_692390_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_003099579.1|692386_693658_-	YeaH/YhbH family protein	NA	A0A140HLI1	Bacillus_phage	37.2	4.2e-09
WP_003085078.1|693758_695681_-	PrkA family serine protein kinase	NA	NA	NA	NA	NA
WP_003099577.1|695959_696292_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA	NA
WP_003113213.1|696335_697187_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	33.3	1.1e-08
WP_003085085.1|697186_697567_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003161932.1|697603_698410_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_003085089.1|698525_699512_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_003109024.1|699508_700801_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_004352244.1|700781_703565_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_023086928.1|703691_704708_+	phosphotransferase	NA	NA	NA	NA	NA
WP_003117959.1|704704_705379_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_009875781.1|705380_706139_+	DnaJ domain-containing protein	NA	NA	NA	NA	NA
WP_009875782.1|706139_707201_-	alpha/beta hydrolase family protein	NA	NA	NA	NA	NA
WP_009875783.1|707352_709746_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_003085103.1|709791_710424_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003085106.1|710552_711587_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003085109.1|711820_712930_+	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.4	7.8e-28
WP_003099539.1|712985_714032_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003123930.1|714146_715394_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003099535.1|715499_716330_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003085122.1|716453_717128_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003099532.1|717127_717946_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_023086929.1|718018_719497_+	anthranilate synthase component I	NA	NA	NA	NA	NA
WP_003121843.1|719813_720128_-	pyocin activator PrtN family protein	NA	NA	NA	NA	NA
WP_003113202.1|720227_720998_-	helix-turn-helix transcriptional regulator	NA	A0A1B0Z078	Pseudomonas_phage	59.1	1.4e-71
WP_003085132.1|721455_721656_+	repressor PtrB	NA	W6ATC1	Enterobacter_phage	58.3	3.7e-05
WP_023086930.1|721703_722063_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017002346.1|722426_722870_+|holin	holin	holin	B5TK61	Pseudomonas_phage	51.8	6.5e-26
WP_009875788.1|722885_723515_+	glycoside hydrolase family 19 protein	NA	A0A125RNP1	Pseudomonas_phage	78.0	7.1e-87
WP_004355109.1|723511_723874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003118919.1|723870_724128_+	hypothetical protein	NA	A0A125RNP3	Pseudomonas_phage	64.6	8.3e-18
WP_003113190.1|724443_724938_+	hypothetical protein	NA	A0A286S1Q8	Klebsiella_phage	56.5	1.4e-45
WP_003113189.1|724949_725297_+|tail	phage tail assembly chaperone family protein, TAC	tail	NA	NA	NA	NA
WP_003113188.1|725326_725581_+	hypothetical protein	NA	A0A2H4PI34	Pseudomonas_phage	38.4	6.3e-10
WP_009875789.1|725627_727466_+|tail	phage tail tape measure protein	tail	A0A0S2SYD9	Pseudomonas_phage	35.8	3.4e-28
WP_003113186.1|727458_727800_+|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	40.0	1.4e-17
WP_003117971.1|727807_728503_+|tail	phage minor tail protein L	tail	A0A1B0VNE0	Pseudomonas_phage	50.2	1.1e-69
WP_003117973.1|728505_729276_+	C40 family peptidase	NA	A0A2D1GNP8	Pseudomonas_phage	55.6	4.2e-81
WP_003117974.1|729330_729933_+|tail	tail assembly protein	tail	A0A1V0E8A0	Vibrio_phage	57.3	6.5e-53
WP_023086931.1|729991_733606_+|tail	phage tail protein	tail	A0A0S2SYC5	Pseudomonas_phage	55.3	0.0e+00
WP_003118927.1|733841_734630_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003115342.1|734653_735745_+	hypothetical protein	NA	A0A0S2SY45	Pseudomonas_phage	36.9	1.3e-46
WP_023085656.1|735744_736080_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003118928.1|736060_736291_+	hypothetical protein	NA	A0A1W6JT87	Pseudomonas_phage	65.3	6.7e-19
WP_009315200.1|736386_737439_+	hypothetical protein	NA	A0A0H5AXZ9	Pseudomonas_phage	52.5	2.7e-62
WP_003113177.1|737438_737741_+	hypothetical protein	NA	A0A0H5B141	Pseudomonas_phage	71.0	4.4e-34
WP_003118930.1|737737_737968_+	hypothetical protein	NA	C8ZKF3	Pseudomonas_phage	71.6	1.4e-24
WP_003101640.1|738386_738992_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	65.8	6.0e-75
WP_003085203.1|738993_740043_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	57.8	1.8e-111
WP_023086932.1|740039_740876_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	56.9	1.6e-70
>prophage 2
NZ_LT883143	Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) chromosome I	6902967	1546500	1555529	6902967		Bacillus_phage(33.33%)	8	NA	NA
WP_003098558.1|1546500_1547136_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.3	1.0e-40
WP_003115226.1|1547181_1548075_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0S2SXL7	Bacillus_phage	34.3	3.0e-06
WP_003113871.1|1548179_1549184_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.3	7.0e-36
WP_003092272.1|1549610_1549934_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_012613730.1|1550000_1552568_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.1	3.2e-24
WP_012613731.1|1552693_1553701_-	TolB family protein	NA	NA	NA	NA	NA
WP_003092262.1|1553848_1554355_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	76.0	8.1e-57
WP_003092260.1|1554488_1555529_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	59.5	1.5e-113
>prophage 3
NZ_LT883143	Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) chromosome I	6902967	2777238	2784132	6902967	tRNA	uncultured_Caudovirales_phage(83.33%)	9	NA	NA
WP_003097631.1|2777238_2778519_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.4	8.2e-98
WP_003160439.1|2778520_2779918_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003097628.1|2779922_2780897_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_003160436.1|2780984_2781968_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	74.0	1.6e-141
WP_003119979.1|2781964_2782300_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	69.4	1.5e-38
WP_003090391.1|2782296_2782602_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_003090389.1|2782601_2782961_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	61.7	1.4e-34
WP_003090387.1|2782957_2783353_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	72.1	2.7e-47
WP_003090386.1|2783463_2784132_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	82.1	1.5e-90
>prophage 4
NZ_LT883143	Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) chromosome I	6902967	4463739	4474179	6902967	integrase,tRNA	Pseudomonas_phage(77.78%)	13	4456164:4456180	4476093:4476109
4456164:4456180	attL	GCCGCTGTTCATCGCCG	NA	NA	NA	NA
WP_003082462.1|4463739_4464564_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	73.7	1.4e-106
WP_012614375.1|4464669_4465686_-|integrase	tyrosine-type recombinase/integrase	integrase	Q56VN7	Pseudomonas_phage	99.7	5.0e-191
WP_023087658.1|4465685_4466978_-	hypothetical protein	NA	Q56VN8	Pseudomonas_phage	97.0	6.9e-254
WP_023087660.1|4467235_4468498_-	hypothetical protein	NA	Q56VN9	Pseudomonas_phage	55.9	6.0e-117
WP_003133726.1|4468499_4468850_-	DUF2523 domain-containing protein	NA	Q56VP0	Pseudomonas_phage	40.2	1.6e-19
WP_031633401.1|4468859_4469441_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003124953.1|4470167_4470386_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003124954.1|4470399_4470651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023087663.1|4470771_4471206_-	hypothetical protein	NA	Q56VP5	Pseudomonas_phage	98.6	7.1e-62
WP_031760609.1|4471721_4472009_-	DUF5447 family protein	NA	Q56VP7	Pseudomonas_phage	95.7	8.9e-53
WP_033871697.1|4472007_4472226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022581007.1|4472231_4472447_-	DNA-binding protein	NA	Q56VP9	Pseudomonas_phage	93.0	1.4e-34
WP_023087665.1|4472937_4474179_+	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	26.2	6.7e-20
4476093:4476109	attR	GCCGCTGTTCATCGCCG	NA	NA	NA	NA
>prophage 5
NZ_LT883143	Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) chromosome I	6902967	5832401	5871470	6902967	integrase,coat,tRNA	Pseudomonas_phage(60.0%)	40	5859368:5859427	5873167:5873248
WP_003099340.1|5832401_5832950_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_003099339.1|5832997_5833513_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_003099337.1|5833512_5834055_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_003099335.1|5834073_5834862_+	molecular chaperone	NA	NA	NA	NA	NA
WP_023087816.1|5834878_5837251_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_003099330.1|5837247_5838195_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_003099328.1|5838196_5839570_-	MFS transporter	NA	NA	NA	NA	NA
WP_003161397.1|5839849_5840872_-	ferrochelatase	NA	NA	NA	NA	NA
WP_003457067.1|5840868_5841786_-	TIGR01777 family protein	NA	NA	NA	NA	NA
WP_003099318.1|5842199_5843183_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003099314.1|5843335_5844292_+	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA	NA
WP_003094990.1|5844301_5845201_+	MerR family transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	39.1	8.5e-17
WP_003121048.1|5845197_5846643_+	deoxyribodipyrimidine photo-lyase	NA	A0A167RC11	Powai_lake_megavirus	27.8	1.8e-45
WP_003099307.1|5846768_5847290_-	acyloxyacyl hydrolase	NA	A0A2H4J0I5	uncultured_Caudovirales_phage	69.8	1.4e-59
WP_003099300.1|5847423_5848221_-	glutamate racemase	NA	NA	NA	NA	NA
WP_023087817.1|5848210_5848969_-	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
WP_003121049.1|5848962_5849793_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_003114692.1|5849794_5850877_-	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	48.3	5.6e-07
WP_023087818.1|5850894_5852163_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_025982305.1|5852306_5854079_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003095005.1|5854083_5854701_+	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_009875808.1|5854702_5855551_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_003099281.1|5855717_5856659_+	ribose-phosphate pyrophosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	4.1e-46
WP_003099279.1|5856775_5857390_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
WP_003099278.1|5857431_5858016_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_003099270.1|5858056_5859157_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
5859368:5859427	attL	ATTCATAATGCTGATGTCCCAGGTTCAAGTCCCGGTGTAGCCACCATATTTTTCAAGGGG	NA	NA	NA	NA
WP_023087819.1|5859549_5860434_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023087820.1|5860410_5861412_-|integrase	tyrosine-type recombinase/integrase	integrase	F1BUS9	Erwinia_phage	46.5	2.6e-75
WP_023087821.1|5861408_5862701_-	hypothetical protein	NA	Q56VN8	Pseudomonas_phage	92.0	3.0e-241
WP_023087822.1|5862930_5864205_-	hypothetical protein	NA	Q56VN9	Pseudomonas_phage	87.0	8.2e-199
WP_003114150.1|5864208_5864565_-	DUF2523 domain-containing protein	NA	Q56VP0	Pseudomonas_phage	100.0	7.9e-59
WP_031633680.1|5864569_5865880_-	hypothetical protein	NA	Q56VP1	Pseudomonas_phage	56.8	2.7e-51
WP_003125072.1|5866031_5866280_-|coat	phage coat protein B	coat	Q56VP2	Pseudomonas_phage	92.7	2.0e-32
WP_023087824.1|5866292_5866544_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023087825.1|5866665_5867100_-	phage destabilizing protein	NA	Q56VP5	Pseudomonas_phage	86.8	3.0e-60
WP_023087826.1|5867615_5867906_-	DUF5447 family protein	NA	Q56VP7	Pseudomonas_phage	94.8	6.2e-54
WP_031633681.1|5867909_5868122_-	hypothetical protein	NA	Q56VP8	Pseudomonas_phage	95.7	4.4e-33
WP_003115921.1|5868117_5868390_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031633682.1|5868836_5869172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023087829.1|5869703_5871470_-	hypothetical protein	NA	A0A0B6VLB5	Edwardsiella_phage	34.8	2.8e-11
5873167:5873248	attR	ATTCATAATGCTGATGTCCCAGGTTCAAGTCCCGGTGTAGCCACCATATTTTTCAAGGGGTTAGCGCAAGCTAACCCCTTTT	NA	NA	NA	NA
