assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900155645.1_Propionibacterium_massilien	NZ_LT706985	Propionimicrobium sp. Marseille-P3275 strain Marseille-P3275T chromosome contig00001	1	106810-106941	1	CRISPRCasFinder	no		cas3,DinG,DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas9	Orphan	GGGGTTGACGAGGGCGTTAGCCCGAGGATCACCCCGACGTGGGTGGGT	48	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas9	NA,NA|74aa|down_0|NZ_LT706985.1_107074_107296_+,NA|144aa|down_6|NZ_LT706985.1_111879_112311_+,NA|93aa|down_7|NZ_LT706985.1_112585_112864_-,NA|149aa|down_8|NZ_LT706985.1_113072_113519_-	NA|105aa|up_9|NZ_LT706985.1_98832_99147_+	PRK07948, PRK07948, putative monovalent cation/H+ antiporter subunit F; Reviewed	NA|119aa|up_8|NZ_LT706985.1_99147_99504_+	PRK12674, PRK12674, putative monovalent cation/H+ antiporter subunit G; Reviewed	NA|96aa|up_7|NZ_LT706985.1_99504_99792_-	pfam06781, CrgA, Cell division protein CrgA	NA|237aa|up_6|NZ_LT706985.1_99893_100604_+	pfam05949, DUF881, Bacterial protein of unknown function (DUF881)	NA|346aa|up_5|NZ_LT706985.1_100600_101638_-	PRK03437, PRK03437, 3-isopropylmalate dehydrogenase; Provisional	NA|92aa|up_4|NZ_LT706985.1_101680_101956_-	pfam11127, DUF2892, Protein of unknown function (DUF2892)	NA|360aa|up_3|NZ_LT706985.1_102058_103138_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|533aa|up_2|NZ_LT706985.1_103159_104758_+	PRK12344, PRK12344, putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional	NA|268aa|up_1|NZ_LT706985.1_104767_105571_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|307aa|up_0|NZ_LT706985.1_105563_106484_+	pfam02517, Abi, CAAX protease self-immunity	NA|74aa|down_0|NZ_LT706985.1_107074_107296_+	NA	NA|476aa|down_1|NZ_LT706985.1_107283_108711_+	pfam14062, DUF4253, Domain of unknown function (DUF4253)	NA|250aa|down_2|NZ_LT706985.1_108748_109498_+	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1)	NA|88aa|down_3|NZ_LT706985.1_109551_109815_+	pfam15562, Imm17, Immunity protein 17	NA|216aa|down_4|NZ_LT706985.1_109822_110470_+	pfam14137, DUF4304, Domain of unknown function (DUF4304)	NA|413aa|down_5|NZ_LT706985.1_110609_111848_+	pfam05117, DUF695, Family of unknown function (DUF695)	NA|144aa|down_6|NZ_LT706985.1_111879_112311_+	NA	NA|93aa|down_7|NZ_LT706985.1_112585_112864_-	NA	NA|149aa|down_8|NZ_LT706985.1_113072_113519_-	NA	NA|85aa|down_9|NZ_LT706985.1_113928_114183_+	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family
GCF_900155645.1_Propionibacterium_massilien	NZ_LT706985	Propionimicrobium sp. Marseille-P3275 strain Marseille-P3275T chromosome contig00001	2	1067077-1067216	2	CRISPRCasFinder	no		cas3,DinG,DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas9	Orphan	GGCACGGGCTGACCCGGTTGCCC	23	0	0	NA	NA	NA	2	2	Orphan	cas3,DinG,DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas9	NA|58aa|up_3|NZ_LT706985.1_1061836_1062010_+,NA	NA|200aa|up_9|NZ_LT706985.1_1055750_1056350_-	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin	NA|515aa|up_8|NZ_LT706985.1_1056619_1058164_-	PRK00074, guaA, GMP synthase; Reviewed	NA|99aa|up_7|NZ_LT706985.1_1058167_1058464_-	PRK09239, PRK09239, chorismate mutase; Provisional	NA|370aa|up_6|NZ_LT706985.1_1058474_1059584_-	PRK08649, PRK08649, GuaB3 family IMP dehydrogenase-related protein	NA|494aa|up_5|NZ_LT706985.1_1059592_1061074_-	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain	NA|248aa|up_4|NZ_LT706985.1_1061166_1061910_-	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|58aa|up_3|NZ_LT706985.1_1061836_1062010_+	NA	NA|442aa|up_2|NZ_LT706985.1_1062362_1063688_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|529aa|up_1|NZ_LT706985.1_1063790_1065377_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|99aa|up_0|NZ_LT706985.1_1065388_1065685_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|184aa|down_0|NZ_LT706985.1_1067573_1068125_-	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|340aa|down_1|NZ_LT706985.1_1068168_1069188_-	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|202aa|down_2|NZ_LT706985.1_1069288_1069894_-	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|134aa|down_3|NZ_LT706985.1_1069916_1070318_-	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|126aa|down_4|NZ_LT706985.1_1070361_1070739_-	PRK05179, rpsM, 30S ribosomal protein S13; Validated	NA|38aa|down_5|NZ_LT706985.1_1070981_1071095_-	PRK00465, rpmJ, 50S ribosomal protein L36; Reviewed	NA|74aa|down_6|NZ_LT706985.1_1071204_1071426_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|282aa|down_7|NZ_LT706985.1_1071629_1072475_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|188aa|down_8|NZ_LT706985.1_1072529_1073093_-	PRK00279, adk, adenylate kinase; Reviewed	NA|435aa|down_9|NZ_LT706985.1_1073089_1074394_-	PRK09204, secY, preprotein translocase subunit SecY; Reviewed
GCF_900155645.1_Propionibacterium_massilien	NZ_LT706985	Propionimicrobium sp. Marseille-P3275 strain Marseille-P3275T chromosome contig00001	3	1239650-1239728	3	CRISPRCasFinder	no		cas3,DinG,DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas9	Orphan	CTCGCCCGCCAACCGCCGTCGCTCA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas9	NA|800aa|up_2|NZ_LT706985.1_1232325_1234725_+,NA	NA|542aa|up_9|NZ_LT706985.1_1224963_1226589_+	TIGR02868, ABC_transporter_ATP-binding_protein, thiol reductant ABC exporter, CydC subunit	NA|200aa|up_8|NZ_LT706985.1_1226644_1227244_+	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only]	NA|289aa|up_7|NZ_LT706985.1_1227271_1228138_-	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]	NA|103aa|up_6|NZ_LT706985.1_1228192_1228501_+	pfam01910, Thiamine_BP, Thiamine-binding protein	NA|224aa|up_5|NZ_LT706985.1_1228497_1229169_-	COG2949, SanA, Uncharacterized membrane protein [Function unknown]	NA|558aa|up_4|NZ_LT706985.1_1229206_1230880_-	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|331aa|up_3|NZ_LT706985.1_1230983_1231976_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|800aa|up_2|NZ_LT706985.1_1232325_1234725_+	NA	NA|846aa|up_1|NZ_LT706985.1_1234857_1237395_+	pfam12029, DUF3516, Domain of unknown function (DUF3516)	NA|418aa|up_0|NZ_LT706985.1_1237811_1239065_+	pfam13635, DUF4143, Domain of unknown function (DUF4143)	NA|337aa|down_0|NZ_LT706985.1_1240606_1241617_-	TIGR04337, Radical_SAM, AmmeMemoRadiSam system radical SAM enzyme	NA|182aa|down_1|NZ_LT706985.1_1241613_1242159_-	TIGR04335, AMMECR1_domain_protein, AmmeMemoRadiSam system protein A	NA|260aa|down_2|NZ_LT706985.1_1242160_1242940_-	cd07361, MEMO_like, Memo (mediator of ErbB2-driven cell motility) is co-precipitated with the C terminus of ErbB2, a protein involved in cell motility	NA|95aa|down_3|NZ_LT706985.1_1243052_1243337_+	COG2350, COG2350, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_LT706985.1_1243425_1243917_+	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|573aa|down_5|NZ_LT706985.1_1243935_1245654_-	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|449aa|down_6|NZ_LT706985.1_1245725_1247072_-	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|540aa|down_7|NZ_LT706985.1_1247238_1248858_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|95aa|down_8|NZ_LT706985.1_1249095_1249380_-	pfam11662, DUF3263, Protein of unknown function (DUF3263)	NA|407aa|down_9|NZ_LT706985.1_1249527_1250748_+	cd07011, cupin_PMI_type_I_N, type I phosphomannose isomerase in eukaryotes and bacteria, N-terminal cupin domain
GCF_900155645.1_Propionibacterium_massilien	NZ_LT706985	Propionimicrobium sp. Marseille-P3275 strain Marseille-P3275T chromosome contig00001	4	1645022-1647633	4,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,DinG,DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas9	Type I-E	GGATCATCCCCGCTGTGCGGGGAACAC,GGATCATCCCCGCTGTGCGGGGAACAC,GGATCATCCCCGCTGTGCGGGGAACAC,GGATCATCCCCGCTGTGCGGGGAACAC	27,27,27,27	0	0	NA	NA	NA:NA:NA:NA	43,43,40,40	43	TypeI-E	cas3,DinG,DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas9	NA|62aa|up_6|NZ_LT706985.1_1641962_1642148_+,NA|47aa|up_5|NZ_LT706985.1_1642277_1642418_-,NA|160aa|up_4|NZ_LT706985.1_1642742_1643222_+,NA|51aa|up_3|NZ_LT706985.1_1643352_1643505_-,NA|72aa|up_2|NZ_LT706985.1_1643834_1644050_-,NA|102aa|up_1|NZ_LT706985.1_1644141_1644447_-,NA|82aa|up_0|NZ_LT706985.1_1644757_1645003_-,NA|62aa|down_8|NZ_LT706985.1_1656898_1657084_-	NA|68aa|up_9|NZ_LT706985.1_1640914_1641118_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|166aa|up_8|NZ_LT706985.1_1641105_1641603_+	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|75aa|up_7|NZ_LT706985.1_1641562_1641787_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|62aa|up_6|NZ_LT706985.1_1641962_1642148_+	NA	NA|47aa|up_5|NZ_LT706985.1_1642277_1642418_-	NA	NA|160aa|up_4|NZ_LT706985.1_1642742_1643222_+	NA	NA|51aa|up_3|NZ_LT706985.1_1643352_1643505_-	NA	NA|72aa|up_2|NZ_LT706985.1_1643834_1644050_-	NA	NA|102aa|up_1|NZ_LT706985.1_1644141_1644447_-	NA	NA|82aa|up_0|NZ_LT706985.1_1644757_1645003_-	NA	cas2|119aa|down_0|NZ_LT706985.1_1647732_1648089_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|339aa|down_1|NZ_LT706985.1_1648085_1649102_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_LT706985.1_1649098_1649749_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|236aa|down_3|NZ_LT706985.1_1649735_1650443_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|375aa|down_4|NZ_LT706985.1_1650442_1651567_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|216aa|down_5|NZ_LT706985.1_1651582_1652230_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|543aa|down_6|NZ_LT706985.1_1652233_1653862_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|925aa|down_7|NZ_LT706985.1_1653858_1656633_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|62aa|down_8|NZ_LT706985.1_1656898_1657084_-	NA	NA|377aa|down_9|NZ_LT706985.1_1657297_1658428_+	pfam13191, AAA_16, AAA ATPase domain
GCF_900155645.1_Propionibacterium_massilien	NZ_LT706985	Propionimicrobium sp. Marseille-P3275 strain Marseille-P3275T chromosome contig00001	5	1789546-1790221	3,5,2,4	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2	cas3,DinG,DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas9	Type II-B, or Type II-C?,Type II-A,Type II-C, Type II-B	GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGCT,GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGC,GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGC,GAAGTCTATCAAAGGGAAGTAGAACTGATTCCCAGC	37,36,36,36	0	0	NA	NA	NA:NA:NA:NA	8,10,10,8	10	TypeII-B,orTypeII-C?,TypeII-A,TypeII-C,TypeII-B	cas3,DinG,DEDDh,csa3,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas9	NA,NA	NA|441aa|up_9|NZ_LT706985.1_1776268_1777591_+	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]	NA|301aa|up_8|NZ_LT706985.1_1777684_1778587_-	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|349aa|up_7|NZ_LT706985.1_1778717_1779764_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|452aa|up_6|NZ_LT706985.1_1779894_1781250_+	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion]	NA|341aa|up_5|NZ_LT706985.1_1781272_1782295_+	COG1957, URH1, Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]	NA|308aa|up_4|NZ_LT706985.1_1782317_1783241_+	cd00408, DHDPS-like, Dihydrodipicolinate synthase family	NA|317aa|up_3|NZ_LT706985.1_1783627_1784578_+	cd19092, AKR_BsYcsN_EcYdhF-like, Bacillus subtilis YcsN, Escherichia coli YdhF and similar proteins	cas9|1117aa|up_2|NZ_LT706985.1_1784923_1788274_+	pfam18470, Cas9_a, Cas9 alpha-helical lobe domain	cas1|302aa|up_1|NZ_LT706985.1_1788276_1789182_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|107aa|up_0|NZ_LT706985.1_1789174_1789495_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|375aa|down_0|NZ_LT706985.1_1790291_1791416_-	COG3583, COG3583, Uncharacterized protein conserved in bacteria [Function unknown]	NA|201aa|down_1|NZ_LT706985.1_1791584_1792187_-	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|64aa|down_2|NZ_LT706985.1_1792308_1792500_-	pfam05532, CsbD, CsbD-like	NA|199aa|down_3|NZ_LT706985.1_1792596_1793193_-	pfam05175, MTS, Methyltransferase small domain	NA|269aa|down_4|NZ_LT706985.1_1793189_1793996_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|148aa|down_5|NZ_LT706985.1_1794276_1794720_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|177aa|down_6|NZ_LT706985.1_1794743_1795274_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|450aa|down_7|NZ_LT706985.1_1795388_1796738_+	PRK14318, glmM, phosphoglucosamine mutase; Provisional	NA|317aa|down_8|NZ_LT706985.1_1796742_1797693_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|616aa|down_9|NZ_LT706985.1_1797828_1799676_+	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase
