assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900128415.1_PRJEB15655	NZ_LT635772	Anaerococcus mediterraneensis strain Marseille-P2765T chromosome contig00001	1	470295-470384	1	CRISPRCasFinder	no		cas4,csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,DinG,WYL	Orphan	ACAAAAGAAGAAACAAAGGTAGAAGAA	27	0	0	NA	NA	NA	1	1	Orphan	cas4,csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,DinG,WYL	NA,NA	NA|255aa|up_9|NZ_LT635772.1_458982_459747_+	cd01107, HTH_BmrR, Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator	NA|275aa|up_8|NZ_LT635772.1_459859_460684_+	cd09009, PNP-EcPNPII_like, purine nucleoside phosphorylases similar to human PNP and Escherichia coli PNP-II (XapA)	NA|364aa|up_7|NZ_LT635772.1_460696_461788_+	cd19964, PBP1_BMP-like, periplasmic binding component of a basic membrane lipoprotein (BMP) from Aeropyrum pernix K1 and its close homologs in other bacteria	NA|501aa|up_6|NZ_LT635772.1_461879_463382_+	COG3845, COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only]	NA|359aa|up_5|NZ_LT635772.1_463374_464451_+	COG4603, COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|306aa|up_4|NZ_LT635772.1_464455_465373_+	COG1079, COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only]	NA|351aa|up_3|NZ_LT635772.1_465369_466422_+	PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed	NA|217aa|up_2|NZ_LT635772.1_466430_467081_+	PRK06833, PRK06833, L-fuculose-phosphate aldolase	NA|484aa|up_1|NZ_LT635772.1_467202_468654_+	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain	NA|268aa|up_0|NZ_LT635772.1_468997_469801_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|462aa|down_0|NZ_LT635772.1_470886_472272_+	cd01017, AdcA, Metal binding protein AdcA	NA|224aa|down_1|NZ_LT635772.1_472268_472940_+	cd03235, ABC_Metallic_Cations, ATP-binding cassette domain of the metal-type transporters	NA|265aa|down_2|NZ_LT635772.1_472933_473728_+	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|692aa|down_3|NZ_LT635772.1_473819_475895_-	cd07550, P-type_ATPase_HM, P-type heavy metal-transporting ATPase; uncharacterized subfamily	NA|117aa|down_4|NZ_LT635772.1_475891_476242_-	pfam07371, DUF1490, Protein of unknown function (DUF1490)	NA|276aa|down_5|NZ_LT635772.1_476533_477361_-	pfam02548, Pantoate_transf, Ketopantoate hydroxymethyltransferase	NA|304aa|down_6|NZ_LT635772.1_477357_478269_-	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed	NA|280aa|down_7|NZ_LT635772.1_478501_479341_+	pfam02569, Pantoate_ligase, Pantoate-beta-alanine ligase	NA|339aa|down_8|NZ_LT635772.1_479515_480532_-	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated	NA|337aa|down_9|NZ_LT635772.1_480533_481544_-	pfam14020, DUF4236, Protein of unknown function (DUF4236)
GCF_900128415.1_PRJEB15655	NZ_LT635772	Anaerococcus mediterraneensis strain Marseille-P2765T chromosome contig00001	2	762011-762160	2	CRISPRCasFinder	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh	cas4,csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,DinG,WYL	Type I-E	GTCCTACCCGCACACGCGGGGGTGATCC	28	0	0	NA	NA	I-C,I-E,II-B	2	2	TypeI-E	cas4,csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,DinG,WYL	NA|119aa|up_8|NZ_LT635772.1_750611_750968_+,NA|68aa|down_0|NZ_LT635772.1_762195_762399_+,NA|70aa|down_1|NZ_LT635772.1_762480_762690_+	NA|494aa|up_9|NZ_LT635772.1_748806_750288_+	pfam05272, VirE, Virulence-associated protein E	NA|119aa|up_8|NZ_LT635772.1_750611_750968_+	NA	NA|463aa|up_7|NZ_LT635772.1_751184_752573_-	cd03226, ABC_cobalt_CbiO_domain2, Second domain of the ATP-binding cassette component of cobalt transport system	NA|219aa|up_6|NZ_LT635772.1_752583_753240_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|196aa|up_5|NZ_LT635772.1_753241_753829_-	pfam09605, Trep_Strep, Hypothetical bacterial integral membrane protein (Trep_Strep)	NA|573aa|up_4|NZ_LT635772.1_753839_755558_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|585aa|up_3|NZ_LT635772.1_755541_757296_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|331aa|up_2|NZ_LT635772.1_757448_758441_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|345aa|up_1|NZ_LT635772.1_759242_760277_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|292aa|up_0|NZ_LT635772.1_760382_761258_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|68aa|down_0|NZ_LT635772.1_762195_762399_+	NA	NA|70aa|down_1|NZ_LT635772.1_762480_762690_+	NA	cas3|918aa|down_2|NZ_LT635772.1_763023_765777_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|558aa|down_3|NZ_LT635772.1_765769_767443_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|202aa|down_4|NZ_LT635772.1_767468_768074_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|360aa|down_5|NZ_LT635772.1_768063_769143_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|233aa|down_6|NZ_LT635772.1_769152_769851_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|220aa|down_7|NZ_LT635772.1_769860_770520_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|313aa|down_8|NZ_LT635772.1_770516_771455_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	DEDDh|299aa|down_9|NZ_LT635772.1_771455_772352_+	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family
GCF_900128415.1_PRJEB15655	NZ_LT635772	Anaerococcus mediterraneensis strain Marseille-P2765T chromosome contig00001	3	772404-773167	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh	cas4,csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,DinG,WYL	Type I-E	GTCCTACCCGCACACGCGGGGGTGATCC,GTCCTACCCGCACACGCGGGGGTGATCC,GTCCTACCCGCACACGCGGGGGTGATCCT	28,28,29	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	11,12,12	12	TypeI-E	cas4,csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,DinG,WYL	NA|68aa|up_9|NZ_LT635772.1_762195_762399_+,NA|70aa|up_8|NZ_LT635772.1_762480_762690_+,NA|345aa|down_0|NZ_LT635772.1_773190_774225_+	NA|68aa|up_9|NZ_LT635772.1_762195_762399_+	NA	NA|70aa|up_8|NZ_LT635772.1_762480_762690_+	NA	cas3|918aa|up_7|NZ_LT635772.1_763023_765777_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|558aa|up_6|NZ_LT635772.1_765769_767443_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|202aa|up_5|NZ_LT635772.1_767468_768074_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|360aa|up_4|NZ_LT635772.1_768063_769143_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|233aa|up_3|NZ_LT635772.1_769152_769851_+	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|220aa|up_2|NZ_LT635772.1_769860_770520_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|313aa|up_1|NZ_LT635772.1_770516_771455_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	DEDDh|299aa|up_0|NZ_LT635772.1_771455_772352_+	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|345aa|down_0|NZ_LT635772.1_773190_774225_+	NA	NA|126aa|down_1|NZ_LT635772.1_774660_775038_+	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|364aa|down_2|NZ_LT635772.1_775030_776122_+	COG4194, COG4194, Predicted membrane protein [General function prediction only]	NA|384aa|down_3|NZ_LT635772.1_777370_778522_+	COG0281, SfcA, Malic enzyme [Energy production and conversion]	NA|274aa|down_4|NZ_LT635772.1_778641_779463_+	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|264aa|down_5|NZ_LT635772.1_779455_780247_+	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain	NA|272aa|down_6|NZ_LT635772.1_780243_781059_+	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|295aa|down_7|NZ_LT635772.1_781052_781937_+	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|259aa|down_8|NZ_LT635772.1_782997_783774_+	pfam13650, Asp_protease_2, Aspartyl protease	NA|230aa|down_9|NZ_LT635772.1_783751_784441_+	cd07064, AlkD_like_1, A new structural DNA glycosylase containing HEAT-like repeats
GCF_900128415.1_PRJEB15655	NZ_LT635772	Anaerococcus mediterraneensis strain Marseille-P2765T chromosome contig00001	4	2062454-2062545	4	CRISPRCasFinder	no		cas4,csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,DinG,WYL	Orphan	TGAACATAGGGAGTATCCCTATAACC	26	0	0	NA	NA	NA	1	1	Orphan	cas4,csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,DinG,WYL	NA|94aa|up_7|NZ_LT635772.1_2058439_2058721_+,NA|211aa|up_6|NZ_LT635772.1_2058764_2059397_-,NA|86aa|up_3|NZ_LT635772.1_2060234_2060492_-,NA|72aa|down_4|NZ_LT635772.1_2068592_2068808_-,NA|252aa|down_6|NZ_LT635772.1_2074492_2075248_-,NA|61aa|down_7|NZ_LT635772.1_2076938_2077121_+	NA|407aa|up_9|NZ_LT635772.1_2056756_2057977_+	COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]	NA|147aa|up_8|NZ_LT635772.1_2057989_2058430_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|94aa|up_7|NZ_LT635772.1_2058439_2058721_+	NA	NA|211aa|up_6|NZ_LT635772.1_2058764_2059397_-	NA	NA|180aa|up_5|NZ_LT635772.1_2059393_2059933_-	pfam14066, DUF4256, Protein of unknown function (DUF4256)	NA|106aa|up_4|NZ_LT635772.1_2059916_2060234_-	pfam11756, YgbA_NO, Nitrous oxide-stimulated promoter	NA|86aa|up_3|NZ_LT635772.1_2060234_2060492_-	NA	NA|224aa|up_2|NZ_LT635772.1_2060590_2061262_-	pfam05382, Amidase_5, Bacteriophage peptidoglycan hydrolase	NA|38aa|up_1|NZ_LT635772.1_2061297_2061411_-	pfam12841, YvrJ, YvrJ protein family	NA|171aa|up_0|NZ_LT635772.1_2061762_2062275_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|661aa|down_0|NZ_LT635772.1_2063447_2065430_+	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|194aa|down_1|NZ_LT635772.1_2066730_2067312_+	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1	NA|326aa|down_2|NZ_LT635772.1_2067313_2068291_+	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|78aa|down_3|NZ_LT635772.1_2068336_2068570_-	pfam11148, DUF2922, Protein of unknown function (DUF2922)	NA|72aa|down_4|NZ_LT635772.1_2068592_2068808_-	NA	NA|443aa|down_5|NZ_LT635772.1_2071521_2072850_-	pfam05262, Borrelia_P83, Borrelia P83/100 protein	NA|252aa|down_6|NZ_LT635772.1_2074492_2075248_-	NA	NA|61aa|down_7|NZ_LT635772.1_2076938_2077121_+	NA	NA|NA	NA	NA|NA	NA
