The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT703505	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera chromosome 1	6078679	273015	342625	6078679	transposase,integrase	Rhodococcus_phage(20.0%)	55	329402:329461	350990:352509
WP_042910414.1|273015_274221_-|integrase	site-specific integrase	integrase	G9FGY1	Rhodococcus_phage	54.6	2.9e-113
WP_042910415.1|274258_274459_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_142383088.1|275371_275743_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154074405.1|276169_276316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_142383282.1|277300_278068_+	chemotaxis protein	NA	NA	NA	NA	NA
WP_142383090.1|278064_278787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_051445816.1|278783_284621_-	relaxase domain-containing protein	NA	NA	NA	NA	NA
WP_051445817.1|284898_285384_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142383091.1|285655_285892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042910451.1|286551_286734_-	antitoxin VbhA family protein	NA	NA	NA	NA	NA
WP_042910419.1|286837_287842_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJP1	Virus_Rctr41k	26.6	2.2e-05
WP_042910420.1|288018_288579_-	RES domain-containing protein	NA	NA	NA	NA	NA
WP_042910421.1|288575_288917_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_042910422.1|292364_292997_-	CAP domain-containing protein	NA	NA	NA	NA	NA
WP_042910423.1|293358_294018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_051445819.1|294014_294692_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054585687.1|294695_296150_-	MCE family protein	NA	NA	NA	NA	NA
WP_042910424.1|296151_297291_-	MCE family protein	NA	NA	NA	NA	NA
WP_042910425.1|297287_298619_-	MCE family protein	NA	NA	NA	NA	NA
WP_051445822.1|298615_299875_-	MCE family protein	NA	NA	NA	NA	NA
WP_042910426.1|299871_300900_-	MCE family protein	NA	NA	NA	NA	NA
WP_054585688.1|300957_302301_-	MCE family protein	NA	NA	NA	NA	NA
WP_054585689.1|302305_303163_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_042910429.1|303159_303966_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_101930933.1|305529_306252_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	43.3	2.4e-46
WP_042910430.1|308243_308816_-	protocatechuate 3,4-dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_042910456.1|309648_310428_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042910432.1|311026_311938_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_042910433.1|312201_313122_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_042910434.1|313182_314316_+	epoxide hydrolase	NA	NA	NA	NA	NA
WP_051445821.1|314980_316324_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_042910435.1|316320_316863_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_042910437.1|316968_318000_+	2,3-butanediol dehydrogenase	NA	NA	NA	NA	NA
WP_087139621.1|318054_319308_+	CoA transferase	NA	NA	NA	NA	NA
WP_042910439.1|319304_320471_+	transporter	NA	NA	NA	NA	NA
WP_042910440.1|320507_320951_+	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_042910459.1|320943_321999_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_042910177.1|322210_323620_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_042910179.1|323640_324177_+	3-phenylpropionate/cinnamic acid dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_042910181.1|324272_324713_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_042910183.1|324803_325691_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_054585743.1|325853_326387_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042910184.1|326522_327266_+	class II aldolase/adducin family protein	NA	NA	NA	NA	NA
WP_101930916.1|328410_329445_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
329402:329461	attL	CAGTACAACTGATATGTAGGCATTCTTTGTCAAGAGGCAGGTGAAAGCCGCCCCGGTTGG	NA	NA	NA	NA
WP_080691087.1|329719_330823_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_080691110.1|330897_331101_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_080691111.1|331275_332118_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_042910185.1|333261_334161_+	alpha/beta fold hydrolase	NA	A0A0A7RWQ4	Mycobacterium_phage	37.2	4.5e-10
WP_087139801.1|334172_335480_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_042910186.1|335482_335998_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_042910187.1|336034_337267_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_054585634.1|337315_338260_+	extradiol ring-cleavage dioxygenase	NA	NA	NA	NA	NA
WP_042910189.1|338554_338950_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_042910040.1|339479_340544_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_080691086.1|341953_342625_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	U5P429	Shigella_phage	33.1	1.6e-15
350990:352509	attR	CCAACCGGGGCGGCTTTCACCTGCCTCTTGACAAAGAATGCCTACATATCAGTTGTACTGCCCAGGCAGGTTGGTTGAACAGATGTGACGACACGCTGTAGCGGTCGTTGGTGGGTGAAGGTCTCCTGTCGTGGAGTGGAGCTGCTACCACTTCACCGCACGAACAGGAGACCTTCATGGTCCACGCTAATGCCGTATTGACTCCTCGTGGGCGCTTGTTGCTGGCGCGTCGAGTCGTTGACGAGGGCTGGCCGATCGTCCGCGCCGCCGAGCATTTCCACGTGTCTTGGCCAACTGCCAAACGCTGGGCGTCGCGCTATGCGGCGATGGGGGCGGCCGGGATGACCGATCGGTCCAGCCGACCCCACCACTGTCCGAAGCGCACACCACAACCGGTGGTGCGCAAGATCGTGCATTTGCGATGGCACCACCGGCTTTCTCCACTGGCCATTGCGTCTCGGTTATCGATGCCGGCCTCCACGGTGCACGCGGTGTTGGTGCGGTGTCGACTGAATCGGCTGTCGCACATTGACATCCGCACTGGTGAAGTCATCCGCCGCTATGAACATGACCACCCCGGTTCGCTGATCCACGTCGACGTCAAGAAACTGGGCAACATCCCCGACGGTGGGGGCTGGCGCTTCGTGGGGCGCGCTCAAGGTTGGAAGAACCGACGATCCATGCCCACCGCCAAACGCAGCCGGTACCGCAACGAGTTGATGGGCCATTCCTTCGTGCACACCGTGATCGACGACCACTCCCGAGTGGCTTATGCCGAGATCCACGACGACGAAACCGCGGCTACTGCCATCGCGGTGCTGCGCCGCGCTATCGCTTGGTTCGCTGCTCGGGGCGTGGCTGTCAAGCACGTGCTATCAGACAACGGCTCCTGCTACCGCGCCCATGCCTGGCGCGACGCCTGTGCTGAGCTGCACGTCACGCCCAAACGGACCCGCGCTTACCGGCCCCAGACCAACGGCAAGATCGAACGCTTCACCGCACCATGGCCGCCGAATGGGCCTTCGCCCGCCACTACTCCAACGAACGCACCCGCCGCTCCGCCCTACCGGCCTGGCTGCACACCTACAATCACTGTGAGTCTTCACTCCTCGATCGGGAAGGTCCCACCCATCACGCGGTTGACCAACCTGCCTGGGCAGTACAACTAGTCGATTCAGAGCCACGCTCCTAATGAGGCCGGGGGGCGTGAACTTCTGCATCGGGCGCTGGCCCGGCTCGGTAGTGTGCGAAGGTGAGCGCCAAATCCGCTCGCTGACTCTCCTTGAGCAGGTCAATGCTTCGCGTCTGCGATACCTACGCTGACTGCCCGGCGTGAACTAGGCGCAATGCGTACCCGGACCCACGGCCGAACGCGGCTGTCCTCGCGACCGTTGCGCCGCCAATTATCACGACGGAACATGTGGGCGACACTGTACGCGGGCTGTCGTCGGCTGCGACCCCACCAAAGGCACACTCTAGCGCGAATCGGAGTTTGCGTCGCGCCGCGCGGATAGACGTGC	NA	NA	NA	NA
>prophage 2
NZ_LT703505	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera chromosome 1	6078679	908691	943355	6078679	transposase,integrase	Staphylococcus_phage(50.0%)	23	902063:902078	929167:929182
902063:902078	attL	GGCCGGCGCGGTCGCC	NA	NA	NA	NA
WP_101930856.1|908691_909324_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_007172184.1|909500_909971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007172185.1|909967_912169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007172186.1|912165_913890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162839945.1|913889_915359_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_007172195.1|919138_919465_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_007172196.1|920313_920934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040624304.1|920934_921969_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	31.5	7.0e-31
WP_087139632.1|922219_923367_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	32.4	9.2e-32
WP_033717415.1|924488_925088_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_101930920.1|925516_926128_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_007172201.1|926203_926650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042910691.1|926764_927661_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_170320644.1|927657_930744_-	MMPL family transporter	NA	NA	NA	NA	NA
929167:929182	attR	GGCGACCGCGCCGGCC	NA	NA	NA	NA
WP_007172204.1|931548_932190_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_046187034.1|932642_935576_-	MMPL family transporter	NA	NA	NA	NA	NA
WP_042909907.1|935572_935983_-	membrane protein	NA	NA	NA	NA	NA
WP_007172294.1|936087_937281_-	cytochrome P450	NA	NA	NA	NA	NA
WP_007172295.1|937346_937928_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033717424.1|938573_939197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087139652.1|939181_939793_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101930934.1|940434_941688_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	31.1	6.1e-29
WP_075630243.1|942119_943355_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	45.2	1.7e-84
>prophage 3
NZ_LT703505	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera chromosome 1	6078679	967296	1026824	6078679	transposase,integrase	Staphylococcus_phage(60.0%)	37	986826:986842	1032428:1032444
WP_008256196.1|967296_968370_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_033711234.1|968756_969083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007168405.1|972227_973100_+	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_007168406.1|973252_973528_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_007168407.1|973527_973920_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_007168413.1|978985_979939_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_172417559.1|979935_981501_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_170826078.1|982471_983374_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_007168420.1|983675_984419_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_042909893.1|984516_985365_+	CoA transferase	NA	NA	NA	NA	NA
WP_019732177.1|985361_986537_+	thiolase family protein	NA	NA	NA	NA	NA
WP_007168424.1|986546_988223_+	long-chain-fatty-acid--CoA ligase	NA	NA	NA	NA	NA
986826:986842	attL	CCCGGCATCGCCGCGGT	NA	NA	NA	NA
WP_007168425.1|988219_988996_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_007168426.1|989003_990152_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_007168427.1|990177_990936_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_046184758.1|991923_993276_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.6	6.3e-32
WP_007168431.1|993903_994230_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_042909891.1|996812_998048_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	45.2	1.0e-84
WP_007168435.1|998899_999418_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101930905.1|999486_1000581_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_007168437.1|1001972_1003139_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2K9VF00	Mycobacterium_phage	29.1	1.6e-07
WP_007168443.1|1005993_1006425_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007168449.1|1009065_1010694_+	long-chain fatty acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	25.3	6.7e-28
WP_007168450.1|1010746_1011688_+	R2-like ligand-binding oxidase	NA	NA	NA	NA	NA
WP_007168451.1|1011894_1012320_+	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_101930904.1|1012337_1013462_+	thiolase family protein	NA	NA	NA	NA	NA
WP_007168453.1|1013528_1014422_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_007168454.1|1014452_1016072_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	28.1	1.1e-30
WP_050790029.1|1016319_1017441_+	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA	NA
WP_007168458.1|1019115_1020333_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_074021181.1|1020859_1021357_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_007168461.1|1021464_1022871_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_007168462.1|1022917_1023064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007168467.1|1025193_1025520_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_007168468.1|1025868_1026147_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_154074411.1|1026143_1026299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007168470.1|1026374_1026824_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
1032428:1032444	attR	ACCGCGGCGATGCCGGG	NA	NA	NA	NA
>prophage 4
NZ_LT703505	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera chromosome 1	6078679	2053278	2109845	6078679	transposase,integrase	Tupanvirus(66.67%)	27	2053999:2054058	2116261:2117614
WP_080691159.1|2053278_2053944_+|transposase	TnsA-like heteromeric transposase endonuclease subunit	transposase	NA	NA	NA	NA
2053999:2054058	attL	TGAACCGCCCCGGGTTTGATGCACACCTTCTTTCGAGGGAAGGTTGTTCGCATCATGCCG	NA	NA	NA	NA
WP_087139680.1|2054052_2055322_+|transposase	IS3 family transposase	transposase	A0A2P1JR32	Mycobacterium_phage	41.7	3.7e-50
WP_042911237.1|2055351_2057466_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_080691160.1|2057471_2058641_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_158090653.1|2058779_2061257_+	TniQ family protein	NA	NA	NA	NA	NA
WP_069953761.1|2064693_2065506_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	33.1	3.8e-32
WP_042909843.1|2066470_2066758_-	DUF1330 domain-containing protein	NA	NA	NA	NA	NA
WP_046182709.1|2066754_2069220_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_042909842.1|2069216_2070440_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_157679854.1|2071551_2073351_-	TniQ family protein	NA	NA	NA	NA	NA
WP_042911243.1|2073528_2073789_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_042911244.1|2074209_2074797_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_142383138.1|2075115_2075547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_142383139.1|2075577_2075955_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080691161.1|2075917_2076793_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_042911246.1|2077254_2080254_-	nocobactin polyketide synthase NbtC	NA	NA	NA	NA	NA
WP_042911247.1|2080250_2081552_-	polyketide synthase	NA	NA	NA	NA	NA
WP_042911248.1|2081548_2082283_-	thioesterase	NA	NA	NA	NA	NA
WP_087139839.1|2082279_2082753_-	acetyltransferase	NA	NA	NA	NA	NA
WP_042911250.1|2082938_2087927_+	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	26.7	1.5e-94
WP_087139684.1|2087908_2092387_+	non-ribosomal peptide synthetase	NA	A0A2K9L3I8	Tupanvirus	23.6	3.1e-35
WP_042911252.1|2092410_2095863_+	non-ribosomal peptide synthetase	NA	A0A2K9L3I8	Tupanvirus	23.6	4.6e-34
WP_080691156.1|2095863_2097252_-	SagB family peptide dehydrogenase	NA	NA	NA	NA	NA
WP_080691157.1|2099334_2103375_-	non-ribosomal peptide synthetase	NA	A0A2K9L3I8	Tupanvirus	24.6	1.5e-41
WP_051445860.1|2105729_2106473_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072501249.1|2107386_2107767_-	DUF4189 domain-containing protein	NA	NA	NA	NA	NA
WP_042909842.1|2108621_2109845_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
2116261:2117614	attR	CGGCATGATGCGAACAACCTTCCCTCGAAAGAAGGTGTGCATCAAACCCGGGGCGGTTCATCCCGCGCTGTGCGGTGTGTACGCAGCTGCTGTCCACGGTGCTTCCTTTGACGGCCGCGAAACCGGGCCGCCCGTAACAACTACTATCTATGTACAGAGATAGTAGTTGCTGCGGAGGCGCCCCACAATCACGAACTGAAGCGCATCGGCACACCTGCGGTGCGATCGGCCAGCCGTGTGCTCATCGCTTTGGGAGAGGCCCGGCGCCCGGGCGCGACGAGACGCCGGCAAGGTTGCGGCGAGTCGTTGTCCAATCGACGCACCCGGTCCACGTTTGCATTACTATCTACGTACGGAGAAAGTATCGCGATTCGGAGACCGGTGCGGCCCTGCCAGCGCGACAGACACCCGACACTGGTACCCGGGAGAGGTCCATAGTGCGGATACGAGGATTCGGAGAACTTGAGGCGGTCATCATGGACCGCATTTGGAACCGCGACCCGGCCGACGCGACCACAGTGCGCGAGGTCTTCGACGACCTTGCGGCCGAACGCACCATCGCGTACACGACGGTGATGTCCACGATGGACAACCTGCATACCAAGGGCTGGCTGCGGCGAGAACGCGATGGCAAGGCCTACCGGTATCGGCCCACCATGTCGCGCGAGCAGCACAGCGCCCGGCTCATGCGGGAGGCATTCGCCGGCGGCGGTCATCCCGATCTGGTGCTTCATCATTTCGTCGAACAGATCGGCCCTGAGGAATCCGCACGCCTGCGTGCTGCGCTGCGACGGCGGCGGTCGAAATGAGAGCCGACCAGCGGTGAACATCGCTATTTGCCTGCTGTTGTACAGCCTGGCGATGCTGGTCGCCGGACCGCCGCTGTTGCGTGAGCTGACTTGGCATGGACATGCCCCCCGATTTGGGGTTGCCGCCTGGTTGACCGCTATCGCCACGGTGCTACTGACCTGGCTGCTAGCAGCGGGAATGACCCTTCTCGCGGTAGCCAGTCACTGGATCTACCCGCGAGCGCTGGTGGAATCCTGTCTGGTCCGGTTGCGCGGCGTGGTGGCCCCCAGCATCACGCTGGGAGTAATCGGCGCAATGGTCGCGCTGCTGGCCGCGGTCAGCAGCGTGCGCCTGGCTAGCACCGTTTCGCGGATGCGTGCCCGCGCGCGTGCGCACGCCGAGGCGGTGTGCATGGTCGGTCATCGCAACGGCGATGGATATGTGCTTGTGGATGCCGCCGAGCCCGCCGCGTACTGTGTCGCAGGCCGGCCCCCCGCGATCGTCGTGACCAGCGCTGCCCTTGCTGCACTCGATGAGAAGGAGTTGGCTGCGGTCCTCGCCCACG	NA	NA	NA	NA
>prophage 5
NZ_LT703505	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera chromosome 1	6078679	4607720	4614296	6078679		Bacillus_phage(33.33%)	7	NA	NA
WP_172417591.1|4607720_4609838_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	51.6	3.2e-208
WP_008259183.1|4609855_4610308_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	40.2	5.8e-14
WP_008259184.1|4610339_4610579_-	redoxin NrdH	NA	V5UN81	Mycobacterium_phage	63.2	1.3e-20
WP_008259185.1|4611107_4611662_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	34.4	1.2e-05
WP_008259186.1|4611753_4612368_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_008259187.1|4612376_4613420_+	DNA polymerase IV	NA	F1C5A5	Cronobacter_phage	29.1	3.9e-21
WP_008259188.1|4613354_4614296_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	28.8	1.2e-05
>prophage 6
NZ_LT703505	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera chromosome 1	6078679	5172044	5180690	6078679		Burkholderia_phage(50.0%)	8	NA	NA
WP_014385777.1|5172044_5173571_+	cyclic nucleotide-binding domain-containing protein	NA	W8CYF6	Bacillus_phage	37.4	1.3e-12
WP_042913325.1|5173610_5174450_+	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_042913327.1|5174446_5175313_+	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_008260499.1|5175340_5176336_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	46.5	5.8e-75
WP_042913511.1|5176337_5176955_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	38.8	1.3e-27
WP_042913329.1|5177154_5178276_+	acyltransferase	NA	A9YX16	Burkholderia_phage	27.7	2.9e-14
WP_042913331.1|5178405_5179542_+	acyltransferase	NA	A9YX16	Burkholderia_phage	28.0	2.6e-18
WP_042913512.1|5179601_5180690_+	acyltransferase	NA	A9YX16	Burkholderia_phage	29.4	1.3e-16
>prophage 1
NZ_LT703506	Mycobacterium chimaera strain Mycobacterium chimaera MC045 isolate Mycobacterium chimaera plasmid 2	324321	15196	68293	324321	transposase,integrase	uncultured_Caudovirales_phage(14.29%)	52	25639:25655	52824:52840
WP_036432573.1|15196_17173_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	37.5	1.1e-96
WP_036432576.1|17771_18137_-	STAS/SEC14 domain-containing protein	NA	NA	NA	NA	NA
WP_036432578.1|18160_18493_-	YnfA family protein	NA	A0A2H4JF35	uncultured_Caudovirales_phage	35.0	3.0e-12
WP_036432580.1|18503_18836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054585447.1|18822_19275_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_036432584.1|19271_19616_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036432587.1|19689_20148_-	low molecular weight phosphatase family protein	NA	A0A2H4PQT9	Staphylococcus_phage	28.5	1.5e-06
WP_036432590.1|20175_20844_-	arsenate reductase ArsC	NA	A0A2H4PQT9	Staphylococcus_phage	38.5	3.8e-14
WP_036432593.1|20836_21955_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA	NA
WP_084260096.1|21951_22314_-	winged helix-turn-helix transcriptional regulator	NA	A0A218MNF3	uncultured_virus	43.1	6.5e-08
WP_087139964.1|22356_23585_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	34.9	1.0e-28
WP_036432600.1|23715_24228_-	DinB family protein	NA	NA	NA	NA	NA
WP_036432603.1|24291_24768_-	VOC family protein	NA	NA	NA	NA	NA
WP_036432606.1|24868_25228_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	45.6	6.0e-06
WP_036432609.1|25308_25722_-|transposase	transposase	transposase	NA	NA	NA	NA
25639:25655	attL	CTTCTCATCGCTGCGGC	NA	NA	NA	NA
WP_036432612.1|25718_27872_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_036435507.1|27945_29151_-|integrase	tyrosine-type recombinase/integrase	integrase	S6C485	Thermus_phage	26.8	1.0e-09
WP_070930154.1|29173_30430_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0U4JD08	Gordonia_phage	29.1	2.7e-13
WP_049234150.1|30494_31208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170926740.1|31458_33390_-	DEAD/DEAH box helicase family protein	NA	I4AZM6	Saccharomonospora_phage	38.3	1.2e-89
WP_145955075.1|34673_35006_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084260093.1|35043_35301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084260092.1|35419_35629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084260091.1|35791_35989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170926737.1|36061_36208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084260090.1|36263_36485_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170926736.1|37575_37728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170926735.1|37996_38137_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139809056.1|38154_38367_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145955076.1|38414_40691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170926734.1|40936_41107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139809054.1|41442_41673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047328137.1|42052_43024_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_084260085.1|43265_43478_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084260084.1|43604_44159_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084260083.1|44261_45272_-	DNA-binding protein WhiA	NA	NA	NA	NA	NA
WP_084260082.1|45390_45684_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084260081.1|46241_47189_+	DUF1942 domain-containing protein	NA	NA	NA	NA	NA
WP_172417604.1|47208_47379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044524776.1|48073_48670_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_087139968.1|48783_50559_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_087140119.1|52089_53721_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	1.3e-15
52824:52840	attR	GCCGCAGCGATGAGAAG	NA	NA	NA	NA
WP_006438776.1|53755_54160_-	SCP2 sterol-binding domain-containing protein	NA	NA	NA	NA	NA
WP_087140121.1|54208_55708_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_087139970.1|55994_57101_-	NDMA-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	27.6	4.0e-32
WP_087139972.1|57490_58189_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_087139974.1|58224_59556_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_087139978.1|60025_61288_+	cytochrome P450	NA	NA	NA	NA	NA
WP_087139980.1|61287_62562_+	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.0	6.2e-05
WP_044524800.1|62583_62904_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_087139982.1|65034_66795_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	39.3	4.8e-88
WP_087139985.1|66895_68293_+|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
