assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900087185.1_PFRJS11	NZ_LT576038	Propionibacterium freudenreichii isolate PFRJS11 chromosome I	1	1807686-1807784	1	CRISPRCasFinder	no		csa3,cas3,WYL,DinG,DEDDh	Orphan	GGTCAGCCCAACAAGCTGACCCAC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DinG,DEDDh	NA,NA	NA|329aa|up_9|NZ_LT576038.1_1793020_1794007_+	PRK05442, PRK05442, malate dehydrogenase; Provisional	NA|108aa|up_8|NZ_LT576038.1_1794188_1794512_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|287aa|up_7|NZ_LT576038.1_1794517_1795378_-	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	NA|518aa|up_6|NZ_LT576038.1_1795451_1797005_-	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|283aa|up_5|NZ_LT576038.1_1797126_1797975_-	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|830aa|up_4|NZ_LT576038.1_1799320_1801810_-	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|418aa|up_3|NZ_LT576038.1_1801946_1803200_+	COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism]	NA|252aa|up_2|NZ_LT576038.1_1803256_1804012_-	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]	NA|347aa|up_1|NZ_LT576038.1_1804008_1805049_-	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]	NA|339aa|up_0|NZ_LT576038.1_1806145_1807162_-	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|233aa|down_0|NZ_LT576038.1_1807940_1808639_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|398aa|down_1|NZ_LT576038.1_1808635_1809829_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|112aa|down_2|NZ_LT576038.1_1810175_1810511_+	pfam04024, PspC, PspC domain	NA|314aa|down_3|NZ_LT576038.1_1810810_1811752_+	cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)	NA|296aa|down_4|NZ_LT576038.1_1811802_1812690_-	pfam09234, DUF1963, Domain of unknown function (DUF1963)	NA|518aa|down_5|NZ_LT576038.1_1812894_1814448_-	PRK00074, guaA, GMP synthase; Reviewed	NA|343aa|down_6|NZ_LT576038.1_1814743_1815772_-	PRK11618, PRK11618, inner membrane ABC transporter permease protein YjfF; Provisional	NA|353aa|down_7|NZ_LT576038.1_1815768_1816827_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|346aa|down_8|NZ_LT576038.1_1819718_1820756_-	cd01574, PBP1_LacI, ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators	NA|507aa|down_9|NZ_LT576038.1_1820782_1822303_-	PRK02929, PRK02929, L-arabinose isomerase; Provisional
GCF_900087185.1_PFRJS11	NZ_LT576038	Propionibacterium freudenreichii isolate PFRJS11 chromosome I	2	2314230-2314341	2	CRISPRCasFinder	no		csa3,cas3,WYL,DinG,DEDDh	Orphan	GTGGTCACCTGTGCGGCGTCATTGCCGCACAACTGCCCAC	40	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DinG,DEDDh	NA,NA|146aa|down_0|NZ_LT576038.1_2314491_2314929_-,NA|216aa|down_6|NZ_LT576038.1_2322028_2322676_+	NA|229aa|up_9|NZ_LT576038.1_2299827_2300514_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|313aa|up_8|NZ_LT576038.1_2300868_2301807_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|818aa|up_7|NZ_LT576038.1_2301806_2304260_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|279aa|up_6|NZ_LT576038.1_2304582_2305419_-	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|350aa|up_5|NZ_LT576038.1_2305529_2306579_-	COG2706, COG2706, 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]	NA|273aa|up_4|NZ_LT576038.1_2306665_2307484_+	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|240aa|up_3|NZ_LT576038.1_2307582_2308302_-	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins	NA|228aa|up_2|NZ_LT576038.1_2308298_2308982_-	PRK08219, PRK08219, SDR family oxidoreductase	NA|452aa|up_1|NZ_LT576038.1_2309114_2310470_+	pfam04892, VanZ, VanZ like family	NA|863aa|up_0|NZ_LT576038.1_2311454_2314043_+	COG1316, LytR, Transcriptional regulator [Transcription]	NA|146aa|down_0|NZ_LT576038.1_2314491_2314929_-	NA	NA|324aa|down_1|NZ_LT576038.1_2315178_2316150_+	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase	NA|475aa|down_2|NZ_LT576038.1_2316323_2317748_+	PRK05370, PRK05370, argininosuccinate synthase; Validated	NA|509aa|down_3|NZ_LT576038.1_2318402_2319929_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|249aa|down_4|NZ_LT576038.1_2320312_2321059_+	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional	NA|166aa|down_5|NZ_LT576038.1_2321226_2321724_-	PRK00522, tpx, thiol peroxidase	NA|216aa|down_6|NZ_LT576038.1_2322028_2322676_+	NA	NA|374aa|down_7|NZ_LT576038.1_2322737_2323859_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|226aa|down_8|NZ_LT576038.1_2324023_2324701_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|465aa|down_9|NZ_LT576038.1_2324739_2326134_-	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]
GCF_900087185.1_PFRJS11	NZ_LT576038	Propionibacterium freudenreichii isolate PFRJS11 chromosome I	3	2387903-2388010	3	CRISPRCasFinder	no	csa3	csa3,cas3,WYL,DinG,DEDDh	Type I-A	ACCTCGTTCCCGTGCTGGTGCCGGCGCTGTTGGTGGC	37	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DinG,DEDDh	NA,NA|87aa|down_9|NZ_LT576038.1_2404756_2405017_+	NA|231aa|up_9|NZ_LT576038.1_2375118_2375811_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|476aa|up_8|NZ_LT576038.1_2375807_2377235_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|424aa|up_7|NZ_LT576038.1_2377263_2378535_-	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters	NA|357aa|up_6|NZ_LT576038.1_2378534_2379605_-	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]	NA|259aa|up_5|NZ_LT576038.1_2380119_2380896_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|351aa|up_4|NZ_LT576038.1_2380986_2382039_-	COG0240, GpsA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	NA|519aa|up_3|NZ_LT576038.1_2382091_2383648_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|402aa|up_2|NZ_LT576038.1_2383900_2385106_-	TIGR03942, sulfatase_rSAM, anaerobic sulfatase-maturating enzyme	NA|334aa|up_1|NZ_LT576038.1_2385830_2386832_+	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]	NA|336aa|up_0|NZ_LT576038.1_2386828_2387836_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|265aa|down_0|NZ_LT576038.1_2388721_2389516_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|633aa|down_1|NZ_LT576038.1_2391250_2393149_+	COG2015, COG2015, Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|104aa|down_2|NZ_LT576038.1_2395426_2395738_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|451aa|down_3|NZ_LT576038.1_2395747_2397100_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|322aa|down_4|NZ_LT576038.1_2398814_2399780_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|318aa|down_5|NZ_LT576038.1_2400148_2401102_+	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase	NA|337aa|down_6|NZ_LT576038.1_2401173_2402184_+	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase	NA|289aa|down_7|NZ_LT576038.1_2402403_2403270_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|345aa|down_8|NZ_LT576038.1_2403405_2404440_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|87aa|down_9|NZ_LT576038.1_2404756_2405017_+	NA
