assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900044005.1_ASM90004400v1	NZ_LN999987	Enterococcus faecium isolate EFE11651 chromosome I	1	2333765-2333874	1	CRISPRCasFinder	no		cas3,DEDDh,RT,DinG,cas2,csa3,cas14j	Orphan	CTTTGCTCAACCAGTATTATTCATCA	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,RT,DinG,cas2,csa3,cas14j,WYL	NA,NA	NA|322aa|up_9|NZ_LN999987.1_2323513_2324479_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|380aa|up_8|NZ_LN999987.1_2324567_2325707_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|238aa|up_7|NZ_LN999987.1_2326015_2326729_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|234aa|up_6|NZ_LN999987.1_2326982_2327684_-	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|511aa|up_5|NZ_LN999987.1_2327917_2329450_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|303aa|up_4|NZ_LN999987.1_2329839_2330748_-	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|350aa|up_3|NZ_LN999987.1_2330841_2331891_-	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|230aa|up_2|NZ_LN999987.1_2331972_2332662_-	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|123aa|up_1|NZ_LN999987.1_2332767_2333136_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|168aa|up_0|NZ_LN999987.1_2333188_2333692_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|230aa|down_0|NZ_LN999987.1_2334101_2334791_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|141aa|down_1|NZ_LN999987.1_2334894_2335317_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|223aa|down_2|NZ_LN999987.1_2335659_2336328_+	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism]	NA|291aa|down_3|NZ_LN999987.1_2336340_2337213_+	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|340aa|down_4|NZ_LN999987.1_2337303_2338323_-	cd04737, LOX_like_FMN, L-Lactate oxidase (LOX) FMN-binding domain	NA|302aa|down_5|NZ_LN999987.1_2338495_2339401_-	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915)	NA|182aa|down_6|NZ_LN999987.1_2339459_2340005_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|57aa|down_7|NZ_LN999987.1_2340105_2340276_-	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex	NA|51aa|down_8|NZ_LN999987.1_2340299_2340452_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|215aa|down_9|NZ_LN999987.1_2340613_2341258_+	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily
GCF_900044005.1_ASM90004400v1	NZ_LN999988	Enterococcus faecium isolate EFE11651 plasmid II, complete sequence	1	97611-97739	1	CRISPRCasFinder	no			Orphan	GGTATGATTTTCATACCCTCTTGA	24	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,RT,DinG,cas2,csa3,cas14j,WYL	NA|87aa|up_8|NZ_LN999988.1_88701_88962_-,NA|252aa|up_7|NZ_LN999988.1_88974_89730_-,NA|80aa|up_3|NZ_LN999988.1_94298_94538_-,NA|80aa|up_2|NZ_LN999988.1_94603_94843_-,NA|111aa|up_0|NZ_LN999988.1_95969_96302_-,NA	NA|697aa|up_9|NZ_LN999988.1_86614_88705_-	pfam17998, AgI_II_C2, Cell surface antigen I/II C2 terminal domain	NA|87aa|up_8|NZ_LN999988.1_88701_88962_-	NA	NA|252aa|up_7|NZ_LN999988.1_88974_89730_-	NA	NA|251aa|up_6|NZ_LN999988.1_89745_90498_-	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|659aa|up_5|NZ_LN999988.1_90512_92489_-	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain	NA|224aa|up_4|NZ_LN999988.1_92541_93213_-	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|80aa|up_3|NZ_LN999988.1_94298_94538_-	NA	NA|80aa|up_2|NZ_LN999988.1_94603_94843_-	NA	NA|114aa|up_1|NZ_LN999988.1_95009_95351_-	pfam17400, DUF5406, Family of unknown function (DUF5406)	NA|111aa|up_0|NZ_LN999988.1_95969_96302_-	NA	NA|85aa|down_0|NZ_LN999988.1_100453_100708_+	TIGR02609, hypothetical_protein_XAC1195, putative addiction module antidote	NA|105aa|down_1|NZ_LN999988.1_100708_101023_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|227aa|down_2|NZ_LN999988.1_101060_101741_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|145aa|down_3|NZ_LN999988.1_101782_102217_+	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|99aa|down_4|NZ_LN999988.1_102209_102506_+	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|210aa|down_5|NZ_LN999988.1_102525_103155_+	PRK12997, PRK12997, PTS sugar transporter subunit IIC	NA|302aa|down_6|NZ_LN999988.1_103094_104000_-	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA	NA|89aa|down_7|NZ_LN999988.1_105052_105319_+	PRK00194, PRK00194, ACT domain-containing protein	NA|448aa|down_8|NZ_LN999988.1_105333_106677_+	PRK05313, PRK05313, hypothetical protein; Provisional	NA|175aa|down_9|NZ_LN999988.1_106752_107277_+	pfam13358, DDE_3, DDE superfamily endonuclease
