The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LN901633	Bradyrhizobium sp. isolate BF49_genome1 chromosome I	7547693	83667	92807	7547693		Mycobacterium_phage(16.67%)	8	NA	NA
WP_063992166.1|83667_84411_+	ParA family protein	NA	W8ECJ6	Mycobacterium_phage	29.4	4.9e-10
WP_156526634.1|84461_84626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063992167.1|84660_85542_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	30.5	5.1e-22
WP_063992168.1|85623_86385_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_063992169.1|86381_87956_+	2-polyprenylphenol 6-hydroxylase	NA	M4R0M8	Ostreococcus_lucimarinus_virus	25.1	1.0e-25
WP_063992170.1|88012_89479_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	31.8	4.3e-34
WP_063992171.1|89475_89934_+	dUTP diphosphatase	NA	K4JSC8	Caulobacter_phage	62.4	1.5e-46
WP_063992172.1|90302_92807_+	PAS domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	29.6	1.3e-22
>prophage 2
NZ_LN901633	Bradyrhizobium sp. isolate BF49_genome1 chromosome I	7547693	3715542	3751581	7547693	tail,terminase,head,integrase,capsid,portal	Rhizobium_phage(30.77%)	48	3711390:3711405	3752400:3752415
3711390:3711405	attL	CGCCGCATCGGCCGCA	NA	NA	NA	NA
WP_156526903.1|3715542_3716709_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A291AUF0	Sinorhizobium_phage	38.5	8.7e-54
WP_063994265.1|3716735_3716996_-	hypothetical protein	NA	A0A291AUJ1	Sinorhizobium_phage	54.7	9.3e-09
WP_156526904.1|3716992_3717142_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063994266.1|3717141_3717345_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063994267.1|3717341_3717623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063994268.1|3717622_3717832_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156526905.1|3717828_3718344_-	phospholipase	NA	NA	NA	NA	NA
WP_063994270.1|3718407_3718626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084777402.1|3718625_3719372_-	helix-turn-helix transcriptional regulator	NA	A0A1X9HW95	Ruegeria_phage	40.5	4.4e-27
WP_063996741.1|3719831_3720107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063994272.1|3720298_3720598_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156526906.1|3720590_3720950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063994274.1|3720946_3721285_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063994275.1|3721281_3722100_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063994276.1|3722096_3722483_+	helix-turn-helix domain-containing protein	NA	F4YXP8	Roseobacter_phage	43.6	3.1e-08
WP_063996742.1|3722872_3723562_+	hypothetical protein	NA	W5RVC2	Staphylococcus_phage	36.6	2.9e-17
WP_063994277.1|3723558_3723960_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063994278.1|3723956_3724286_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063994279.1|3724289_3726155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063994280.1|3726159_3726429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063994281.1|3726419_3727124_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167552265.1|3727200_3727458_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084777404.1|3727454_3730250_+	bifunctional DNA primase/polymerase	NA	G8DGC0	Emiliania_huxleyi_virus	37.3	9.6e-83
WP_063994284.1|3730606_3731290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156526908.1|3731549_3732212_+	PEPxxWA-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_063994287.1|3732452_3733007_+	hypothetical protein	NA	A0A0A8IL87	Aurantimonas_phage	49.5	3.7e-39
WP_156527254.1|3733119_3733350_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_063994289.1|3734160_3734823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156527255.1|3735351_3735618_+	PEPxxWA-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_063994291.1|3735746_3736457_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_063994292.1|3736584_3738624_+|terminase	phage terminase large subunit family protein	terminase	A0A068CDC0	Rhizobium_phage	44.3	7.1e-152
WP_156526909.1|3738652_3739426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063994294.1|3739581_3739785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063994295.1|3739787_3741437_+|portal	phage portal protein	portal	A0A291AUL8	Sinorhizobium_phage	31.3	3.6e-69
WP_063994296.1|3741433_3742357_+	S49 family peptidase	NA	A0A068CE01	Rhizobium_phage	56.4	1.3e-81
WP_063994297.1|3742418_3742880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063994298.1|3742923_3743610_+|head	head decoration protein	head	NA	NA	NA	NA
WP_063994299.1|3743706_3744750_+|capsid	major capsid protein	capsid	Q9JMM2	Wolbachia_phage	37.4	1.0e-50
WP_063994300.1|3745067_3745469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156526911.1|3745481_3745745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063994302.1|3745943_3746696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063994303.1|3746702_3746894_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063994304.1|3746977_3747676_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156526912.1|3747808_3748282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063994306.1|3748467_3749232_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063994307.1|3749259_3749589_+	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_063994308.1|3749592_3751101_+	hypothetical protein	NA	A0A068CC80	Rhizobium_phage	35.7	7.2e-69
WP_063994309.1|3751191_3751581_+|tail	phage tail tube protein	tail	A0A068CH56	Rhizobium_phage	31.2	7.0e-08
3752400:3752415	attR	TGCGGCCGATGCGGCG	NA	NA	NA	NA
>prophage 3
NZ_LN901633	Bradyrhizobium sp. isolate BF49_genome1 chromosome I	7547693	6714469	6747913	7547693	transposase,protease	Pandoravirus(12.5%)	33	NA	NA
WP_167552233.1|6714469_6715804_-|transposase	IS1182-like element ISBrsp10 family transposase	transposase	NA	NA	NA	NA
WP_063996115.1|6716022_6717204_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_063996116.1|6717329_6718373_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_007611039.1|6718362_6718584_-	DUF2842 domain-containing protein	NA	NA	NA	NA	NA
WP_007611038.1|6718677_6719760_+	COX15/CtaA family protein	NA	NA	NA	NA	NA
WP_063996117.1|6719773_6720106_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007611036.1|6720225_6721506_-	O-acetylhomoserine aminocarboxypropyltransferase	NA	A0A0B5JD48	Pandoravirus	27.1	1.0e-15
WP_007611035.1|6721644_6722229_-	CoA-binding protein	NA	NA	NA	NA	NA
WP_063996118.1|6722340_6723165_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_007611026.1|6723251_6723680_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_007611024.1|6723838_6724303_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_007611021.1|6724304_6724784_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_063996119.1|6725013_6726246_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	2.9e-15
WP_063996120.1|6726303_6726540_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063996121.1|6726642_6726939_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_063996122.1|6726945_6728079_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_063996123.1|6728214_6728919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007611011.1|6729009_6729783_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA	NA
WP_007603494.1|6730040_6731450_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_007603495.1|6731599_6731938_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_063996124.1|6732321_6733821_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_063996125.1|6733820_6734270_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_063996127.1|6734584_6734872_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	41.4	1.9e-10
WP_063996128.1|6734882_6736211_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_063996129.1|6736621_6737983_+	trigger factor	NA	NA	NA	NA	NA
WP_007603501.1|6738301_6738937_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	62.6	2.1e-62
WP_007603503.1|6739377_6740649_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.5	3.2e-134
WP_007611004.1|6740968_6743392_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	49.9	7.0e-207
WP_063996938.1|6743465_6743870_+	GFA family protein	NA	NA	NA	NA	NA
WP_063996130.1|6744138_6744999_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_156527141.1|6745132_6745555_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_063993775.1|6745651_6747019_+|transposase	IS110 family transposase	transposase	Q9JMN8	Wolbachia_phage	49.5	3.0e-114
WP_063993774.1|6747052_6747913_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	42.0	4.0e-56
>prophage 4
NZ_LN901633	Bradyrhizobium sp. isolate BF49_genome1 chromosome I	7547693	6931111	6941257	7547693	tRNA	uncultured_Mediterranean_phage(88.89%)	12	NA	NA
WP_063996218.1|6931111_6932140_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	42.0	9.1e-23
WP_007590654.1|6932136_6932976_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	37.1	5.7e-31
WP_063996219.1|6932997_6933750_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	49.7	8.9e-44
WP_007610722.1|6933916_6934153_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	63.6	4.2e-08
WP_063996220.1|6934242_6934818_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_007610712.1|6934814_6935627_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	48.8	1.4e-55
WP_063996221.1|6935822_6937154_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.8	1.7e-98
WP_063996222.1|6937249_6937612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007610706.1|6937718_6938486_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	38.0	2.4e-36
WP_007610705.1|6938505_6938877_-	response regulator	NA	NA	NA	NA	NA
WP_007610704.1|6939105_6939756_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	50.6	2.7e-28
WP_063996223.1|6939865_6941257_+	LysM peptidoglycan-binding domain-containing M23 family metallopeptidase	NA	Q8SBN9	Clostridium_phage	40.9	2.4e-18
