assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900005615.1_JCM7685	NZ_LN832559	Paracoccus aminovorans isolate JCM7685 chromosome I	1	2565552-2566029	1	CRT	no		WYL,DEDDh,csa3,cas3,cas2,cas1,cas4,cas7,cas8c,cas5	Orphan	NCNCTCCTCCTCCCTGGG	18	1	1	2565992-2566011	NZ_LN832559.1_2728838-2728857	NA	11	11	Orphan	WYL,DEDDh,csa3,cas3,cas2,cas1,cas4,cas7,cas8c,cas5	NA,NA|187aa|down_2|NZ_LN832559.1_2567685_2568246_-,NA|53aa|down_7|NZ_LN832559.1_2571781_2571940_-,NA|103aa|down_9|NZ_LN832559.1_2572923_2573232_-	NA|467aa|up_9|NZ_LN832559.1_2554093_2555494_-	PRK01390, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional	NA|361aa|up_8|NZ_LN832559.1_2555571_2556654_-	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional	NA|462aa|up_7|NZ_LN832559.1_2556653_2558039_-	PRK14093, PRK14093, UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional	NA|490aa|up_6|NZ_LN832559.1_2558035_2559505_-	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional	NA|602aa|up_5|NZ_LN832559.1_2559534_2561340_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|126aa|up_4|NZ_LN832559.1_2561336_2561714_-	COG5462, COG5462, Predicted secreted (periplasmic) protein [Function unknown]	NA|323aa|up_3|NZ_LN832559.1_2561713_2562682_-	PRK00050, PRK00050, 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA|173aa|up_2|NZ_LN832559.1_2562682_2563201_-	PRK00326, PRK00326, transcriptional regulator MraZ	NA|370aa|up_1|NZ_LN832559.1_2563843_2564953_-	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|76aa|up_0|NZ_LN832559.1_2565305_2565533_+	pfam06568, DUF1127, Domain of unknown function (DUF1127)	NA|256aa|down_0|NZ_LN832559.1_2566073_2566841_+	COG2961, ComJ, Protein involved in catabolism of external DNA [General function prediction only]	NA|238aa|down_1|NZ_LN832559.1_2566975_2567689_-	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|187aa|down_2|NZ_LN832559.1_2567685_2568246_-	NA	NA|494aa|down_3|NZ_LN832559.1_2568269_2569751_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|96aa|down_4|NZ_LN832559.1_2569747_2570035_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|235aa|down_5|NZ_LN832559.1_2570165_2570870_+	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|254aa|down_6|NZ_LN832559.1_2570886_2571648_-	pfam09347, DUF1989, Domain of unknown function (DUF1989)	NA|53aa|down_7|NZ_LN832559.1_2571781_2571940_-	NA	NA|261aa|down_8|NZ_LN832559.1_2572068_2572851_-	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|103aa|down_9|NZ_LN832559.1_2572923_2573232_-	NA
GCF_900005615.1_JCM7685	NZ_LN832559	Paracoccus aminovorans isolate JCM7685 chromosome I	2	2895875-2901795	1,2,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	WYL,DEDDh,csa3,cas3,cas2,cas1,cas4,cas7,cas8c,cas5	Type I-C,Type I-U, Type I-U?	GTTTCGATCCACGCCCCCGCGAAGGGGGCGAC,GTTTCGATCCACGCCCCCGCGAAGGGGGCGAC,GTTTCGATCCACGCCCCCGCGAAGGGGGCGAC,GTTTCGATCCACGCCCCCGCGAAGGGGGCGAC	32,32,32,32	0	0	NA	NA	I-C:I-C:I-C:I-C	89,89,86,86	89	TypeI-C,TypeI-U,TypeI-U?	WYL,DEDDh,csa3,cas3,cas2,cas1,cas4,cas7,cas8c,cas5	NA|146aa|up_4|NZ_LN832559.1_2889560_2889998_-,NA|207aa|up_3|NZ_LN832559.1_2889990_2890611_-,NA|145aa|down_8|NZ_LN832559.1_2910626_2911061_+,NA|93aa|down_9|NZ_LN832559.1_2911447_2911726_+	NA|213aa|up_9|NZ_LN832559.1_2884188_2884827_+	cd01013, isochorismatase, Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological systems	NA|257aa|up_8|NZ_LN832559.1_2884828_2885599_+	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	NA|79aa|up_7|NZ_LN832559.1_2886139_2886376_-	COG3433, COG3433, Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]	NA|540aa|up_6|NZ_LN832559.1_2886388_2888008_-	PRK10946, entE, (2,3-dihydroxybenzoyl)adenylate synthase	NA|448aa|up_5|NZ_LN832559.1_2888211_2889555_+	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF	NA|146aa|up_4|NZ_LN832559.1_2889560_2889998_-	NA	NA|207aa|up_3|NZ_LN832559.1_2889990_2890611_-	NA	NA|421aa|up_2|NZ_LN832559.1_2891108_2892371_+	pfam02353, CMAS, Mycolic acid cyclopropane synthetase	NA|117aa|up_1|NZ_LN832559.1_2894730_2895081_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|233aa|up_0|NZ_LN832559.1_2895175_2895874_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|97aa|down_0|NZ_LN832559.1_2901984_2902275_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|345aa|down_1|NZ_LN832559.1_2902276_2903311_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|199aa|down_2|NZ_LN832559.1_2903307_2903904_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|317aa|down_3|NZ_LN832559.1_2903942_2904893_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|593aa|down_4|NZ_LN832559.1_2904889_2906668_-	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas5|233aa|down_5|NZ_LN832559.1_2906664_2907363_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|743aa|down_6|NZ_LN832559.1_2907438_2909667_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	NA|253aa|down_7|NZ_LN832559.1_2909776_2910534_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|145aa|down_8|NZ_LN832559.1_2910626_2911061_+	NA	NA|93aa|down_9|NZ_LN832559.1_2911447_2911726_+	NA
GCF_900005615.1_JCM7685	NZ_LN832559	Paracoccus aminovorans isolate JCM7685 chromosome I	3	3050045-3050179	2	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,cas2,cas1,cas4,cas7,cas8c,cas5	Orphan	AGGTAGTCGTCGCCCTCGCCGCC	23	0	0	NA	NA	NA	2	2	Orphan	WYL,DEDDh,csa3,cas3,cas2,cas1,cas4,cas7,cas8c,cas5	NA,NA	NA|339aa|up_9|NZ_LN832559.1_3039175_3040192_+	cd09019, galactose_mutarotase_like, galactose mutarotase_like	NA|238aa|up_8|NZ_LN832559.1_3040227_3040941_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|282aa|up_7|NZ_LN832559.1_3041042_3041888_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|246aa|up_6|NZ_LN832559.1_3041912_3042650_-	cd05233, SDR_c, classical (c) SDRs	NA|481aa|up_5|NZ_LN832559.1_3042707_3044150_-	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like	NA|219aa|up_4|NZ_LN832559.1_3044287_3044944_+	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine	NA|360aa|up_3|NZ_LN832559.1_3044983_3046063_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|716aa|up_2|NZ_LN832559.1_3046127_3048275_-	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|219aa|up_1|NZ_LN832559.1_3048587_3049244_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|90aa|up_0|NZ_LN832559.1_3049361_3049631_-	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|218aa|down_0|NZ_LN832559.1_3050893_3051547_-	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins	NA|320aa|down_1|NZ_LN832559.1_3051616_3052576_-	pfam13609, Porin_4, Gram-negative porin	NA|169aa|down_2|NZ_LN832559.1_3052906_3053413_+	pfam12100, DUF3576, Domain of unknown function (DUF3576)	NA|891aa|down_3|NZ_LN832559.1_3053478_3056151_+	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|162aa|down_4|NZ_LN832559.1_3056137_3056623_+	COG5468, COG5468, Predicted secreted (periplasmic) protein [Function unknown]	NA|343aa|down_5|NZ_LN832559.1_3056619_3057648_+	PRK06585, holA, DNA polymerase III subunit delta; Reviewed	NA|398aa|down_6|NZ_LN832559.1_3057647_3058841_+	TIGR03862, flavo_PP4765, uncharacterized flavoprotein, PP_4765 family	NA|196aa|down_7|NZ_LN832559.1_3058819_3059407_-	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|415aa|down_8|NZ_LN832559.1_3059529_3060774_+	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters	NA|261aa|down_9|NZ_LN832559.1_3060854_3061637_+	cd07534, HAD_CAP, molecular class C acid phosphatases, similar to Haemophilus influenzae e (P4) acid phosphatase; belongs to the haloacid dehalogenase-like hydrolase superfamily
GCF_900005615.1_JCM7685	NZ_LN832559	Paracoccus aminovorans isolate JCM7685 chromosome I	4	3050237-3050544	3	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas3,cas2,cas1,cas4,cas7,cas8c,cas5	Orphan	AGGTAGTCGTCGCCCTCGCCGCC	23	0	0	NA	NA	NA	5	5	Orphan	WYL,DEDDh,csa3,cas3,cas2,cas1,cas4,cas7,cas8c,cas5	NA,NA	NA|339aa|up_9|NZ_LN832559.1_3039175_3040192_+	cd09019, galactose_mutarotase_like, galactose mutarotase_like	NA|238aa|up_8|NZ_LN832559.1_3040227_3040941_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|282aa|up_7|NZ_LN832559.1_3041042_3041888_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|246aa|up_6|NZ_LN832559.1_3041912_3042650_-	cd05233, SDR_c, classical (c) SDRs	NA|481aa|up_5|NZ_LN832559.1_3042707_3044150_-	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like	NA|219aa|up_4|NZ_LN832559.1_3044287_3044944_+	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine	NA|360aa|up_3|NZ_LN832559.1_3044983_3046063_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|716aa|up_2|NZ_LN832559.1_3046127_3048275_-	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|219aa|up_1|NZ_LN832559.1_3048587_3049244_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|90aa|up_0|NZ_LN832559.1_3049361_3049631_-	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|218aa|down_0|NZ_LN832559.1_3050893_3051547_-	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins	NA|320aa|down_1|NZ_LN832559.1_3051616_3052576_-	pfam13609, Porin_4, Gram-negative porin	NA|169aa|down_2|NZ_LN832559.1_3052906_3053413_+	pfam12100, DUF3576, Domain of unknown function (DUF3576)	NA|891aa|down_3|NZ_LN832559.1_3053478_3056151_+	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|162aa|down_4|NZ_LN832559.1_3056137_3056623_+	COG5468, COG5468, Predicted secreted (periplasmic) protein [Function unknown]	NA|343aa|down_5|NZ_LN832559.1_3056619_3057648_+	PRK06585, holA, DNA polymerase III subunit delta; Reviewed	NA|398aa|down_6|NZ_LN832559.1_3057647_3058841_+	TIGR03862, flavo_PP4765, uncharacterized flavoprotein, PP_4765 family	NA|196aa|down_7|NZ_LN832559.1_3058819_3059407_-	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|415aa|down_8|NZ_LN832559.1_3059529_3060774_+	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters	NA|261aa|down_9|NZ_LN832559.1_3060854_3061637_+	cd07534, HAD_CAP, molecular class C acid phosphatases, similar to Haemophilus influenzae e (P4) acid phosphatase; belongs to the haloacid dehalogenase-like hydrolase superfamily
