assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013357845.1_ASM1335784v1	NZ_CP053816	Vibrio cholerae strain SA7G chromosome 1, complete sequence	1	2567059-2567302	1	PILER-CR	no		cas3,DEDDh,DinG,csx1,csa3,PrimPol	Orphan	AAAATGTGCCTCCTTAGCTCAGTCGGTAGAGCAACGGACTGATAATCCG	49	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,DinG,csx1,csa3,PrimPol,cas3HD	NA,NA	NA|186aa|up_9|NZ_CP053816.1_2559063_2559621_+	COG0762, COG0762, Predicted integral membrane protein [Function unknown]	NA|97aa|up_8|NZ_CP053816.1_2559620_2559911_+	PRK05090, PRK05090, hypothetical protein; Validated	NA|144aa|up_7|NZ_CP053816.1_2559956_2560388_+	pfam14467, DUF4426, Domain of unknown function (DUF4426)	NA|201aa|up_6|NZ_CP053816.1_2560457_2561060_+	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|392aa|up_5|NZ_CP053816.1_2561053_2562229_+	PRK05660, PRK05660, radical SAM family heme chaperone HemW	NA|307aa|up_4|NZ_CP053816.1_2562261_2563182_-	PRK00971, PRK00971, glutaminase; Provisional	NA|240aa|up_3|NZ_CP053816.1_2563292_2564012_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|354aa|up_2|NZ_CP053816.1_2564251_2565313_+	PRK10880, PRK10880, adenine DNA glycosylase	NA|91aa|up_1|NZ_CP053816.1_2565326_2565599_+	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|376aa|up_0|NZ_CP053816.1_2565700_2566828_+	PRK11671, mltC, membrane-bound lytic murein transglycosylase MltC	NA|542aa|down_0|NZ_CP053816.1_2567594_2569220_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|285aa|down_1|NZ_CP053816.1_2570266_2571121_-	PRK09430, djlA, co-chaperone DjlA	NA|784aa|down_2|NZ_CP053816.1_2571279_2573631_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|432aa|down_3|NZ_CP053816.1_2573683_2574979_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|331aa|down_4|NZ_CP053816.1_2574968_2575961_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|272aa|down_5|NZ_CP053816.1_2575974_2576790_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|127aa|down_6|NZ_CP053816.1_2576861_2577242_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|270aa|down_7|NZ_CP053816.1_2577252_2578062_+	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA|166aa|down_8|NZ_CP053816.1_2578211_2578709_-	pfam00186, DHFR_1, Dihydrofolate reductase	NA|158aa|down_9|NZ_CP053816.1_2578721_2579195_-	PRK09917, PRK09917, threonine/serine exporter
GCF_013357845.1_ASM1335784v1	NZ_CP053816	Vibrio cholerae strain SA7G chromosome 1, complete sequence	2	2995938-2996022	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csx1,csa3,PrimPol	Orphan	CCCCCCCTTGCCACGCATAATTACCCCCC	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csx1,csa3,PrimPol,cas3HD	NA|62aa|up_9|NZ_CP053816.1_2982287_2982473_+,NA|90aa|up_8|NZ_CP053816.1_2982550_2982820_+,NA|132aa|up_7|NZ_CP053816.1_2983234_2983630_-,NA|286aa|up_6|NZ_CP053816.1_2983626_2984484_-,NA|204aa|up_3|NZ_CP053816.1_2990519_2991131_+,NA	NA|62aa|up_9|NZ_CP053816.1_2982287_2982473_+	NA	NA|90aa|up_8|NZ_CP053816.1_2982550_2982820_+	NA	NA|132aa|up_7|NZ_CP053816.1_2983234_2983630_-	NA	NA|286aa|up_6|NZ_CP053816.1_2983626_2984484_-	NA	NA|475aa|up_5|NZ_CP053816.1_2984727_2986152_+	pfam06122, TraH, Conjugative relaxosome accessory transposon protein	NA|1135aa|up_4|NZ_CP053816.1_2986155_2989560_+	pfam07916, TraG_N, TraG-like protein, N-terminal region	NA|204aa|up_3|NZ_CP053816.1_2990519_2991131_+	NA	NA|178aa|up_2|NZ_CP053816.1_2991133_2991667_+	pfam06252, DUF1018, Protein of unknown function (DUF1018)	NA|920aa|up_1|NZ_CP053816.1_2991763_2994523_+	PRK14876, PRK14876, conjugal transfer mating pair stabilization protein TraN; Provisional	NA|318aa|up_0|NZ_CP053816.1_2994887_2995841_+	pfam04796, RepA_C, Plasmid encoded RepA protein	NA|123aa|down_0|NZ_CP053816.1_2996197_2996566_+	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|408aa|down_1|NZ_CP053816.1_2996562_2997786_-	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain	NA|454aa|down_2|NZ_CP053816.1_2997988_2999350_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|542aa|down_3|NZ_CP053816.1_2999443_3001069_-	PRK01318, PRK01318, membrane protein insertase; Provisional	NA|86aa|down_4|NZ_CP053816.1_3001071_3001329_-	pfam01809, Haemolytic, Haemolytic domain	NA|119aa|down_5|NZ_CP053816.1_3001295_3001652_-	PRK01732, rnpA, ribonuclease P; Reviewed	NA|46aa|down_6|NZ_CP053816.1_3001664_3001802_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|246aa|down_7|NZ_CP053816.1_3002043_3002781_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|224aa|down_8|NZ_CP053816.1_3002777_3003449_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|249aa|down_9|NZ_CP053816.1_3003526_3004273_-	cd13709, PBP2_YxeM, Substrate binding domain of an ABC transporter YxeMNO; the type 2 periplasmic binding protein fold
GCF_013357845.1_ASM1335784v1	NZ_CP053817	Vibrio cholerae strain SA7G chromosome 2, complete sequence	1	382698-382786	1	CRISPRCasFinder	no		csa3,cas3HD,cas3	Orphan	GTTCACTGCCGCACAGGCAGCTTAGAAAA	29	0	0	NA	NA	I-F	1	1	Orphan	cas3,DEDDh,DinG,csx1,csa3,PrimPol,cas3HD	NA|59aa|up_8|NZ_CP053817.1_377034_377211_+,NA|115aa|up_6|NZ_CP053817.1_378887_379232_+,NA|128aa|up_4|NZ_CP053817.1_379921_380305_+,NA|39aa|up_3|NZ_CP053817.1_380361_380478_+,NA|142aa|up_0|NZ_CP053817.1_381961_382387_+,NA|116aa|down_1|NZ_CP053817.1_383604_383952_+,NA|313aa|down_3|NZ_CP053817.1_384679_385618_+,NA|234aa|down_4|NZ_CP053817.1_386280_386982_+,NA|116aa|down_7|NZ_CP053817.1_388170_388518_+	NA|267aa|up_9|NZ_CP053817.1_375977_376778_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|59aa|up_8|NZ_CP053817.1_377034_377211_+	NA	NA|307aa|up_7|NZ_CP053817.1_377250_378171_-	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|115aa|up_6|NZ_CP053817.1_378887_379232_+	NA	NA|61aa|up_5|NZ_CP053817.1_379532_379715_+	pfam04875, DUF645, Protein of unknown function, DUF645	NA|128aa|up_4|NZ_CP053817.1_379921_380305_+	NA	NA|39aa|up_3|NZ_CP053817.1_380361_380478_+	NA	NA|419aa|up_2|NZ_CP053817.1_380444_381701_+	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|37aa|up_1|NZ_CP053817.1_381704_381815_+	pfam11665, DUF3265, Protein of unknown function (DUF3265)	NA|142aa|up_0|NZ_CP053817.1_381961_382387_+	NA	NA|87aa|down_0|NZ_CP053817.1_383088_383349_+	pfam12493, DUF3709, Protein of unknown function (DUF3709)	NA|116aa|down_1|NZ_CP053817.1_383604_383952_+	NA	NA|146aa|down_2|NZ_CP053817.1_384092_384530_+	cd04664, Nudix_Hydrolase_7, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|313aa|down_3|NZ_CP053817.1_384679_385618_+	NA	NA|234aa|down_4|NZ_CP053817.1_386280_386982_+	NA	NA|137aa|down_5|NZ_CP053817.1_387614_388025_+	PRK08298, PRK08298, cytidine deaminase; Validated	NA|46aa|down_6|NZ_CP053817.1_387994_388132_+	pfam11665, DUF3265, Protein of unknown function (DUF3265)	NA|116aa|down_7|NZ_CP053817.1_388170_388518_+	NA	NA|89aa|down_8|NZ_CP053817.1_388694_388961_+	COG2929, COG2929, Uncharacterized protein conserved in bacteria [Function unknown]	NA|82aa|down_9|NZ_CP053817.1_388947_389193_+	pfam12441, CopG_antitoxin, CopG antitoxin of type II toxin-antitoxin system
