The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP053816	Vibrio cholerae strain SA7G chromosome 1, complete sequence	3004584	656198	662815	3004584		Staphylococcus_phage(66.67%)	7	NA	NA
WP_000210573.1|656198_657332_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.4e-64
WP_033932838.1|657343_658594_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	49.7	1.7e-100
WP_000543544.1|658693_659143_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_175247449.1|659168_660272_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.3	2.0e-44
WP_071193055.1|660276_660930_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.7	4.0e-32
WP_123011119.1|660970_662080_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	39.8	6.7e-64
WP_123011118.1|662344_662815_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.0	8.9e-34
>prophage 2
NZ_CP053816	Vibrio cholerae strain SA7G chromosome 1, complete sequence	3004584	1527277	1533565	3004584		Vibrio_phage(66.67%)	10	NA	NA
WP_032479745.1|1527277_1527625_-	DUF1293 family protein	NA	Q783U4	Vibrio_phage	84.3	5.0e-50
WP_175246066.1|1527627_1528818_-	replication initiation factor domain-containing protein	NA	A0A1W6UG38	Vibrio_phage	70.4	7.0e-160
WP_148512340.1|1528807_1529023_-	hypothetical protein	NA	A0A1W6UGD1	Vibrio_phage	79.1	1.0e-24
WP_175247507.1|1529206_1529581_+	hypothetical protein	NA	R9TE55	Vibrio_phage	79.8	4.3e-47
WP_000021944.1|1530026_1530416_-	helix-turn-helix transcriptional regulator	NA	Q9MBV1	Vibrio_virus	82.1	8.2e-25
WP_000273561.1|1530539_1531682_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000590111.1|1531692_1531974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000022883.1|1531970_1532324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_053034453.1|1532392_1532611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000021944.1|1533175_1533565_-	helix-turn-helix transcriptional regulator	NA	Q9MBV1	Vibrio_virus	82.1	8.2e-25
>prophage 3
NZ_CP053816	Vibrio cholerae strain SA7G chromosome 1, complete sequence	3004584	2266172	2273365	3004584		Anguillid_herpesvirus(16.67%)	9	NA	NA
WP_001162850.1|2266172_2266601_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	38.4	1.0e-20
WP_001959105.1|2266804_2268094_-	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	34.0	6.5e-34
WP_000872174.1|2268313_2268508_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_001124187.1|2268556_2268895_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_001959107.1|2268908_2270759_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	40.9	1.5e-105
WP_001105750.1|2270782_2271298_-	co-chaperone HscB	NA	NA	NA	NA	NA
WP_000301571.1|2271346_2271670_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	50.5	3.0e-25
WP_000331703.1|2271730_2272114_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
WP_175246178.1|2272150_2273365_-	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	30.5	2.0e-32
>prophage 4
NZ_CP053816	Vibrio cholerae strain SA7G chromosome 1, complete sequence	3004584	2506447	2513672	3004584		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_001914090.1|2506447_2507335_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	41.1	2.4e-56
WP_071179763.1|2507602_2510191_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.2	4.9e-33
WP_123011330.1|2510284_2511292_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.2	7.8e-35
WP_000177559.1|2511365_2512301_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	34.7	7.8e-05
WP_057550676.1|2512300_2512927_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	51.5	5.7e-36
WP_000698379.1|2512919_2513672_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.3	8.0e-69
>prophage 5
NZ_CP053816	Vibrio cholerae strain SA7G chromosome 1, complete sequence	3004584	2823527	2834434	3004584		Enterobacteria_phage(42.86%)	9	NA	NA
WP_148537409.1|2823527_2825735_-	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	41.7	3.8e-18
WP_175247583.1|2825941_2827732_-	ABC transporter ATP-binding protein	NA	A0A076FI99	Aureococcus_anophage	27.0	1.3e-21
WP_148537405.1|2827724_2828645_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148537403.1|2828647_2829208_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	45.4	5.1e-36
WP_148537401.1|2829204_2830392_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148537399.1|2830399_2831254_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.0	1.6e-28
WP_148537397.1|2831292_2832165_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	67.9	2.6e-111
WP_175247584.1|2832188_2833253_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.2	3.6e-99
WP_057558688.1|2833495_2834434_+	ADP-glyceromanno-heptose 6-epimerase	NA	R9S880	Prochlorococcus_phage	35.2	1.6e-34
>prophage 6
NZ_CP053816	Vibrio cholerae strain SA7G chromosome 1, complete sequence	3004584	2861538	2869079	3004584	integrase	Stx2-converting_phage(33.33%)	7	2857195:2857211	2865634:2865650
2857195:2857211	attL	CCAAGACTATGGCCACA	NA	NA	NA	NA
WP_175246280.1|2861538_2862795_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A1W6JPG6	Morganella_phage	38.8	4.8e-74
WP_175246281.1|2862796_2863135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075607785.1|2863331_2863634_+	type II toxin-antitoxin system HigB family toxin	NA	F5A3A2	Riemerella_phage	33.0	8.9e-11
WP_000354815.1|2863665_2864037_+	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	56.4	1.2e-30
WP_175246282.1|2864062_2866489_+	DEAD/DEAH box helicase family protein	NA	G0T5H3	Wiseana_iridescent_virus	27.0	9.3e-26
2865634:2865650	attR	CCAAGACTATGGCCACA	NA	NA	NA	NA
WP_095481607.1|2867582_2868785_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0P0ZCT8	Stx2-converting_phage	57.4	7.6e-29
WP_001197622.1|2868794_2869079_-	type II toxin-antitoxin system HigB family toxin	NA	A0A0P0ZE17	Stx2-converting_phage	58.1	1.7e-24
>prophage 1
NZ_CP053819	Vibrio cholerae strain SA7G plasmid pSA7G2, complete sequence	80721	0	23915	80721	integrase	Vibrio_phage(35.29%)	31	11726:11738	25890:25902
WP_032072017.1|846_1197_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032072016.1|1929_2469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080527608.1|2645_3005_+	hypothetical protein	NA	R9TNL4	Vibrio_phage	39.8	2.7e-14
WP_032072014.1|3054_3297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032072013.1|3369_3693_-	hypothetical protein	NA	Q6V7U0	Burkholderia_virus	30.6	5.4e-06
WP_175247732.1|3750_4563_-	3'-5' exoribonuclease	NA	A0A1I9KF44	Aeromonas_phage	38.2	2.2e-27
WP_032072011.1|4621_5569_-	hypothetical protein	NA	A0A291L9Z9	Bordetella_phage	27.7	6.0e-21
WP_175247733.1|5618_6809_-	hypothetical protein	NA	A0A1I9KG78	Aeromonas_phage	27.2	8.9e-14
WP_032072009.1|6857_7055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_175247886.1|7137_7356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_175247734.1|7511_8702_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A067ZJC5	Vibrio_phage	37.1	2.5e-64
WP_175247735.1|8745_9312_+	PadR family transcriptional regulator	NA	H9EB19	Vibrio_phage	28.2	1.8e-09
WP_175247736.1|9326_9914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_175247887.1|9936_10941_+	nucleoid-associated protein YejK	NA	A0A1V0E8C0	Vibrio_phage	59.5	2.3e-111
WP_175247737.1|10937_11669_+	hypothetical protein	NA	NA	NA	NA	NA
WP_175247738.1|11671_12154_+	hypothetical protein	NA	A0A1W6JPA7	Morganella_phage	39.6	1.9e-23
11726:11738	attL	GAGTTATCTCGCC	NA	NA	NA	NA
WP_175247888.1|12166_12568_+	hypothetical protein	NA	NA	NA	NA	NA
WP_175247889.1|12564_14304_+	DEAD/DEAH box helicase	NA	A0A1X9HX80	Ruegeria_phage	41.3	6.3e-117
WP_175247742.1|14317_14761_+	hypothetical protein	NA	NA	NA	NA	NA
WP_175247743.1|14763_15519_+	hypothetical protein	NA	R9VWB9	Serratia_phage	43.2	5.8e-43
WP_080527605.1|15515_15833_+	hypothetical protein	NA	A0A2I7QIG7	Vibrio_phage	50.5	2.7e-18
WP_095490167.1|15829_16144_+	hypothetical protein	NA	A0A2D0YGQ8	Vibrio_phage	46.4	3.4e-21
WP_175247773.1|16206_16656_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032071992.1|16995_17244_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080527603.1|17311_17743_+	transglycosylase SLT domain-containing protein	NA	M4R0Y9	Tetraselmis_viridis_virus	50.7	1.4e-28
WP_175247744.1|17739_18144_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032071988.1|18323_18734_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080527612.1|19196_19901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_175247745.1|19890_21609_+	protein PacB	NA	Q71T61	Escherichia_phage	41.3	6.5e-98
WP_032071984.1|22579_23263_+	DUF2786 domain-containing protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	31.9	4.9e-25
WP_032071983.1|23324_23915_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4J6I5	uncultured_Caudovirales_phage	40.2	1.5e-25
25890:25902	attR	GAGTTATCTCGCC	NA	NA	NA	NA
>prophage 2
NZ_CP053819	Vibrio cholerae strain SA7G plasmid pSA7G2, complete sequence	80721	28191	30566	80721	integrase	Vibrio_phage(100.0%)	4	27821:27836	32805:32820
27821:27836	attL	GGTTTTTTATTGCCTG	NA	NA	NA	NA
WP_175247752.1|28191_29343_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2I7R1N2	Vibrio_phage	31.4	6.2e-36
WP_175247753.1|29430_29619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_175247754.1|29636_30146_+	DUF262 domain-containing protein	NA	U3PFK3	Vibrio_phage	59.9	1.5e-50
WP_032071968.1|30152_30566_+	hypothetical protein	NA	A0A2I7RNG1	Vibrio_phage	43.1	1.7e-20
32805:32820	attR	GGTTTTTTATTGCCTG	NA	NA	NA	NA
>prophage 3
NZ_CP053819	Vibrio cholerae strain SA7G plasmid pSA7G2, complete sequence	80721	35187	36366	80721		Escherichia_phage(100.0%)	1	NA	NA
WP_080527596.1|35187_36366_+	hypothetical protein	NA	A0A222YXT1	Escherichia_phage	34.7	2.3e-38
>prophage 4
NZ_CP053819	Vibrio cholerae strain SA7G plasmid pSA7G2, complete sequence	80721	40227	50171	80721		Escherichia_phage(77.78%)	12	NA	NA
WP_095490140.1|40227_41214_+	hypothetical protein	NA	A0A222YXZ0	Escherichia_phage	26.5	3.2e-25
WP_175247890.1|42032_42242_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032071946.1|42487_44086_+	hypothetical protein	NA	A0A222YWC7	Escherichia_phage	29.2	4.5e-69
WP_175247762.1|44159_44558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_175247763.1|44557_46108_+	hypothetical protein	NA	A0A1B0V7E4	Salmonella_phage	32.2	9.7e-61
WP_032071943.1|46120_46792_+	hypothetical protein	NA	A0A222YXT7	Escherichia_phage	32.1	9.5e-13
WP_032071942.1|46796_47441_+	hypothetical protein	NA	A0A222YY02	Escherichia_phage	35.9	1.0e-24
WP_032071941.1|47454_47952_+	hypothetical protein	NA	A0A222YWE4	Escherichia_phage	31.4	5.8e-15
WP_175247764.1|47951_48515_+	hypothetical protein	NA	Q1MVL0	Enterobacteria_phage	39.7	2.0e-24
WP_032071939.1|48524_48872_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080527595.1|48864_49371_+	hypothetical protein	NA	A0A077SLH8	Escherichia_phage	34.7	6.9e-16
WP_032071937.1|49373_50171_+	hypothetical protein	NA	Q71TC9	Escherichia_phage	31.7	4.4e-25
>prophage 5
NZ_CP053819	Vibrio cholerae strain SA7G plasmid pSA7G2, complete sequence	80721	53203	59440	80721		Escherichia_phage(66.67%)	6	NA	NA
WP_032072045.1|53203_54628_+	bleomycin hydrolase (P1-like BpiA)	NA	Q71TP2	Escherichia_phage	33.4	6.0e-65
WP_080527593.1|54737_56147_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032072042.1|56151_56589_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080527592.1|56592_57147_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032072040.1|57260_57860_+	protein (P1-like Hdf)	NA	O21969	Escherichia_phage	36.2	1.8e-10
WP_175247766.1|57856_59440_+	hypothetical protein	NA	Q1MVM7	Enterobacteria_phage	28.5	1.7e-15
>prophage 6
NZ_CP053819	Vibrio cholerae strain SA7G plasmid pSA7G2, complete sequence	80721	63314	78712	80721	portal	Enterobacteria_phage(28.57%)	11	NA	NA
WP_175247768.1|63314_70187_+	DEAD/DEAH box helicase family protein	NA	Q1MVN7	Enterobacteria_phage	34.5	3.8e-282
WP_175247769.1|70274_70691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032072029.1|70840_72505_+|portal	portal protein (P1-like Prt)	portal	Q9XJG3	Escherichia_phage	34.5	5.0e-79
WP_114729420.1|72497_73520_+	hypothetical protein	NA	Q1MVN5	Enterobacteria_phage	35.3	2.9e-29
WP_175247770.1|73639_73960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_175247771.1|73949_74615_-	cobyrinic acid ac-diamide synthase	NA	Q2A085	Sodalis_phage	34.3	3.1e-24
WP_175247774.1|75313_76336_+	replication initiation protein	NA	NA	NA	NA	NA
WP_175247772.1|76452_76824_-	hypothetical protein	NA	A0A1S6L1T5	Vibrio_phage	38.4	7.8e-09
WP_175247891.1|76939_77734_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A222YYM0	Escherichia_phage	29.3	2.5e-20
WP_032072023.1|77988_78357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080527586.1|78346_78712_-	DUF4406 domain-containing protein	NA	A0A2I7QNK0	Vibrio_phage	43.3	3.9e-13
