The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP053804	Vibrio cholerae strain SL6Y chromosome 1, complete sequence	2900064	657087	663703	2900064		Staphylococcus_phage(66.67%)	7	NA	NA
WP_000210573.1|657087_658221_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.4e-64
WP_175229926.1|658232_659483_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	49.2	6.6e-100
WP_000543544.1|659582_660032_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_069648269.1|660056_661160_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.6	7.0e-45
WP_000493874.1|661164_661818_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.2	1.2e-31
WP_001122865.1|661858_662968_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.8	6.7e-64
WP_000864130.1|663232_663703_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	6.8e-34
>prophage 2
NZ_CP053804	Vibrio cholerae strain SL6Y chromosome 1, complete sequence	2900064	1521247	1544166	2900064		Vibrio_phage(91.67%)	14	NA	NA
WP_175230365.1|1521247_1521559_+	hypothetical protein	NA	E3U9J1	Vibrio_phage	100.0	3.3e-08
WP_175231062.1|1521674_1522046_+	phage protein	NA	G8IRV3	Vibrio_phage	95.1	1.5e-63
WP_175230368.1|1522061_1522907_-	DUF3037 domain-containing protein	NA	NA	NA	NA	NA
WP_175230369.1|1522903_1523614_-	hypothetical protein	NA	NA	NA	NA	NA
WP_175230372.1|1524260_1525628_-	toxin	NA	Q64EV0	Vibrio_phage	98.2	3.2e-257
WP_001160095.1|1525630_1525975_-	DUF2523 domain-containing protein	NA	Q64EV1	Vibrio_phage	100.0	4.8e-61
WP_175230374.1|1525974_1527324_-	hypothetical protein	NA	G8IRU9	Vibrio_phage	67.8	8.2e-56
WP_175230376.1|1527456_1527666_-	hypothetical protein	NA	G8IRU8	Vibrio_phage	79.7	7.2e-20
WP_002043879.1|1527699_1527930_-	hypothetical protein	NA	G8IRU7	Vibrio_phage	97.4	4.6e-36
WP_001896626.1|1527932_1528295_-	DUF1293 family protein	NA	Q783U4	Vibrio_phage	61.0	1.6e-35
WP_000870098.1|1528301_1529597_-	replication initiation factor domain-containing protein	NA	R9TNS0	Vibrio_phage	66.0	2.5e-171
WP_000442957.1|1529593_1529785_-	hypothetical protein	NA	R9TRU0	Vibrio_phage	63.9	1.7e-15
WP_175230379.1|1529909_1530266_+	regulator	NA	Q9MCC3	Vibrio_phage	58.7	7.5e-33
WP_175230382.1|1530588_1544166_-	MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA	NA	B3Y8K3	Vibrio_virus	100.0	8.4e-07
>prophage 3
NZ_CP053804	Vibrio cholerae strain SL6Y chromosome 1, complete sequence	2900064	2226604	2233797	2900064		Anguillid_herpesvirus(16.67%)	9	NA	NA
WP_001162850.1|2226604_2227033_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	38.4	1.0e-20
WP_000107234.1|2227236_2228526_-	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	34.0	6.5e-34
WP_000872174.1|2228745_2228940_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_001124187.1|2228988_2229327_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_001196556.1|2229340_2231191_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.1	9.1e-106
WP_001105750.1|2231214_2231730_-	co-chaperone HscB	NA	NA	NA	NA	NA
WP_000301571.1|2231778_2232102_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	50.5	3.0e-25
WP_000331703.1|2232162_2232546_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
WP_000775253.1|2232582_2233797_-	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	30.5	1.1e-32
>prophage 4
NZ_CP053804	Vibrio cholerae strain SL6Y chromosome 1, complete sequence	2900064	2467061	2474285	2900064		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_001279364.1|2467061_2467949_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	41.1	4.1e-56
WP_175230791.1|2468215_2470804_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.0	2.2e-33
WP_000116735.1|2470897_2471905_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.2	6.0e-35
WP_000177559.1|2471978_2472914_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	34.7	7.8e-05
WP_044126958.1|2472913_2473540_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.7	5.2e-37
WP_044126957.1|2473532_2474285_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.7	2.8e-69
>prophage 1
NZ_CP053805	Vibrio cholerae strain SL6Y chromosome 2, complete sequence	1143503	448956	457999	1143503		Vibrio_phage(90.91%)	13	NA	NA
WP_000164568.1|448956_449313_+	phage protein	NA	G8IRV3	Vibrio_phage	94.9	1.7e-61
WP_175231875.1|449332_449443_-	DUF3265 domain-containing protein	NA	NA	NA	NA	NA
WP_175231495.1|449445_450756_-	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA	NA
WP_175231498.1|451751_453119_-	toxin	NA	Q64EV0	Vibrio_phage	81.6	3.6e-216
WP_001160097.1|453121_453466_-	DUF2523 domain-containing protein	NA	Q64EV1	Vibrio_phage	90.4	1.0e-55
WP_175231501.1|453465_454884_-	hypothetical protein	NA	G8IRU9	Vibrio_phage	69.8	3.3e-140
WP_174500057.1|455017_455227_-	hypothetical protein	NA	G8IRU8	Vibrio_phage	63.8	8.3e-16
WP_000063788.1|455260_455491_-	hypothetical protein	NA	G8IRU7	Vibrio_phage	76.0	4.7e-28
WP_174500055.1|455500_455839_-	DUF1293 domain-containing protein	NA	Q858R2	Vibrio_phage	97.3	1.6e-56
WP_001112192.1|455843_456947_-	replication initiation factor domain-containing protein	NA	Q64EV8	Vibrio_phage	100.0	1.5e-220
WP_000502184.1|456936_457140_-	hypothetical protein	NA	C3W4P3	Vibrio_phage	100.0	2.7e-35
WP_175231504.1|457150_457399_-	hypothetical protein	NA	O56843	Vibrio_virus	85.4	1.5e-32
WP_114808200.1|457630_457999_+	hypothetical protein	NA	G8IRV4	Vibrio_phage	95.9	1.8e-58
