assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013357505.1_ASM1335750v1	NZ_CP053683	Proteus mirabilis strain MPE0027 chromosome, complete genome	1	964-1296	1,1	PILER-CR,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,RT,WYL,DEDDh,c2c9_V-U4,DinG,PD-DExK	Type I-E	CGGTTCATCCCCGTATACACGGGGAACACT,CCCGTATACACGGGGAACACT	30,21	0	0	NA	NA	I-E:NA	5,5	5	TypeI-E	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,RT,WYL,DEDDh,c2c9_V-U4,DinG,PD-DExK	NA,NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	cas2|99aa|down_0|NZ_CP053683.1_1353_1650_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP053683.1_1652_2573_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|226aa|down_2|NZ_CP053683.1_2573_3251_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|246aa|down_3|NZ_CP053683.1_3250_3988_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|345aa|down_4|NZ_CP053683.1_4000_5035_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|196aa|down_5|NZ_CP053683.1_5101_5689_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|533aa|down_6|NZ_CP053683.1_5675_7274_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|898aa|down_7|NZ_CP053683.1_7270_9964_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|419aa|down_8|NZ_CP053683.1_10977_12234_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|96aa|down_9|NZ_CP053683.1_12244_12532_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)
GCF_013357505.1_ASM1335750v1	NZ_CP053683	Proteus mirabilis strain MPE0027 chromosome, complete genome	2	10209-10847	2,1,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,RT,WYL,DEDDh,c2c9_V-U4,DinG,PD-DExK	Type I-E	CGGTTCATCCCCGTGCATACGGGGAACAC,CGGTTCATCCCCGTGCATACGGGGAACAC,CGGTTCATCCCCGTGCATACGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	10,10,10	10	TypeI-E	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,RT,WYL,DEDDh,c2c9_V-U4,DinG,PD-DExK	NA,NA	NA|NA	NA	NA|NA	NA	cas2|99aa|up_7|NZ_CP053683.1_1353_1650_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|up_6|NZ_CP053683.1_1652_2573_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|226aa|up_5|NZ_CP053683.1_2573_3251_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|246aa|up_4|NZ_CP053683.1_3250_3988_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|345aa|up_3|NZ_CP053683.1_4000_5035_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|196aa|up_2|NZ_CP053683.1_5101_5689_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|533aa|up_1|NZ_CP053683.1_5675_7274_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|898aa|up_0|NZ_CP053683.1_7270_9964_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|419aa|down_0|NZ_CP053683.1_10977_12234_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|96aa|down_1|NZ_CP053683.1_12244_12532_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|148aa|down_2|NZ_CP053683.1_12561_13005_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|349aa|down_3|NZ_CP053683.1_13231_14278_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|181aa|down_4|NZ_CP053683.1_14274_14817_-	PRK15393, PRK15393, NUDIX hydrolase YfcD; Provisional	NA|205aa|down_5|NZ_CP053683.1_15013_15628_+	PRK13972, PRK13972, GSH-dependent disulfide bond oxidoreductase; Provisional	NA|302aa|down_6|NZ_CP053683.1_15692_16598_+	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|194aa|down_7|NZ_CP053683.1_16617_17199_-	PRK06029, PRK06029, UbiX family flavin prenyltransferase	NA|506aa|down_8|NZ_CP053683.1_17320_18838_-	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	NA|164aa|down_9|NZ_CP053683.1_18868_19360_-	PRK10845, PRK10845, colicin V production protein; Provisional
GCF_013357505.1_ASM1335750v1	NZ_CP053683	Proteus mirabilis strain MPE0027 chromosome, complete genome	3	296017-296159	2	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,RT,WYL,DEDDh,c2c9_V-U4,DinG,PD-DExK	Orphan	GGTGATATCAATTTCACAGGTGG	23	0	0	NA	NA	NA	2	2	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,RT,WYL,DEDDh,c2c9_V-U4,DinG,PD-DExK	NA|74aa|up_8|NZ_CP053683.1_286687_286909_+,NA|143aa|up_7|NZ_CP053683.1_286976_287405_+,NA|49aa|up_1|NZ_CP053683.1_293954_294101_+,NA|68aa|up_0|NZ_CP053683.1_294101_294305_+,NA	NA|300aa|up_9|NZ_CP053683.1_285585_286485_+	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator	NA|74aa|up_8|NZ_CP053683.1_286687_286909_+	NA	NA|143aa|up_7|NZ_CP053683.1_286976_287405_+	NA	NA|245aa|up_6|NZ_CP053683.1_287572_288307_-	PRK11087, PRK11087, oxidative stress defense protein; Provisional	NA|208aa|up_5|NZ_CP053683.1_288397_289021_-	PRK09304, PRK09304, arginine exporter ArgO	NA|287aa|up_4|NZ_CP053683.1_289189_290050_-	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|124aa|up_3|NZ_CP053683.1_290141_290513_-	PRK05248, PRK05248, hypothetical protein; Provisional	NA|866aa|up_2|NZ_CP053683.1_290683_293281_-	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|49aa|up_1|NZ_CP053683.1_293954_294101_+	NA	NA|68aa|up_0|NZ_CP053683.1_294101_294305_+	NA	NA|476aa|down_0|NZ_CP053683.1_308608_310036_-	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|622aa|down_1|NZ_CP053683.1_310237_312103_-	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|889aa|down_2|NZ_CP053683.1_312115_314782_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|262aa|down_3|NZ_CP053683.1_314945_315731_-	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|181aa|down_4|NZ_CP053683.1_316042_316585_-	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|148aa|down_5|NZ_CP053683.1_316795_317239_+	PRK10574, PRK10574, putative major pilin subunit; Provisional	NA|368aa|down_6|NZ_CP053683.1_317338_318442_+	PRK10436, PRK10436, hypothetical protein; Provisional	NA|400aa|down_7|NZ_CP053683.1_318438_319638_+	PRK10573, PRK10573, protein transport protein HofC	NA|205aa|down_8|NZ_CP053683.1_319915_320530_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|251aa|down_9|NZ_CP053683.1_320532_321285_+	PRK05287, PRK05287, cell division protein ZapD
GCF_013357505.1_ASM1335750v1	NZ_CP053683	Proteus mirabilis strain MPE0027 chromosome, complete genome	4	1558997-1559136	3	PILER-CR	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,RT,WYL,DEDDh,c2c9_V-U4,DinG,PD-DExK	Orphan	CCCAGTTCCCAACTATTTTGTCA	23	0	0	NA	NA	NA	2	2	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,RT,WYL,DEDDh,c2c9_V-U4,DinG,PD-DExK	NA,NA	NA|272aa|up_9|NZ_CP053683.1_1550281_1551097_-	cd05150, APH, Aminoglycoside 3'-phosphotransferase	NA|235aa|up_8|NZ_CP053683.1_1551247_1551952_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|167aa|up_7|NZ_CP053683.1_1552749_1553250_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|116aa|up_6|NZ_CP053683.1_1554209_1554557_-	pfam00893, Multi_Drug_Res, Small Multidrug Resistance protein	NA|264aa|up_5|NZ_CP053683.1_1554720_1555512_-	PRK13746, PRK13746, aminoglycoside resistance protein; Provisional	NA|158aa|up_4|NZ_CP053683.1_1555528_1556002_-	cd00209, DHFR, Dihydrofolate reductase (DHFR)	NA|282aa|up_3|NZ_CP053683.1_1555998_1556844_-	pfam01909, NTP_transf_2, Nucleotidyltransferase domain	NA|179aa|up_2|NZ_CP053683.1_1557229_1557766_+	TIGR02249, Integrase/recombinase_E2_protein	NA|109aa|up_1|NZ_CP053683.1_1557880_1558207_+	TIGR02249, Integrase/recombinase_E2_protein	NA|80aa|up_0|NZ_CP053683.1_1558394_1558634_-	pfam08849, DUF1819, Putative inner membrane protein (DUF1819)	NA|359aa|down_0|NZ_CP053683.1_1559543_1560620_+	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein	NA|564aa|down_1|NZ_CP053683.1_1560632_1562324_+	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein	NA|336aa|down_2|NZ_CP053683.1_1562372_1563380_+	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein	NA|376aa|down_3|NZ_CP053683.1_1563444_1564572_+	TIGR03364, putative_secreted_oxidoreductase, FAD dependent oxidoreductase TIGR03364	NA|135aa|down_4|NZ_CP053683.1_1564646_1565051_-	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|135aa|down_5|NZ_CP053683.1_1565268_1565673_-	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|96aa|down_6|NZ_CP053683.1_1565728_1566016_-	pfam10840, DUF2645, Protein of unknown function (DUF2645)	NA|271aa|down_7|NZ_CP053683.1_1566104_1566917_-	PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional	NA|378aa|down_8|NZ_CP053683.1_1567791_1568925_+	cd03885, M20_CPDG2, M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme	NA|469aa|down_9|NZ_CP053683.1_1568934_1570341_+	COG1288, COG1288, Predicted membrane protein [Function unknown]
GCF_013357505.1_ASM1335750v1	NZ_CP053683	Proteus mirabilis strain MPE0027 chromosome, complete genome	5	4043944-4044099	3	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,RT,WYL,DEDDh,c2c9_V-U4,DinG,PD-DExK	Orphan	ATAATTGCCTTTAGGTTGATATTT	24	0	0	NA	NA	NA	2	2	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3,RT,WYL,DEDDh,c2c9_V-U4,DinG,PD-DExK	NA|546aa|up_6|NZ_CP053683.1_4034425_4036063_-,NA|115aa|down_2|NZ_CP053683.1_4046672_4047017_-,NA|271aa|down_4|NZ_CP053683.1_4047708_4048521_-,NA|107aa|down_5|NZ_CP053683.1_4048489_4048810_-,NA|163aa|down_6|NZ_CP053683.1_4048822_4049311_-,NA|153aa|down_8|NZ_CP053683.1_4051699_4052158_-,NA|151aa|down_9|NZ_CP053683.1_4052217_4052670_-	NA|187aa|up_9|NZ_CP053683.1_4032100_4032661_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|286aa|up_8|NZ_CP053683.1_4032723_4033581_-	PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed	NA|193aa|up_7|NZ_CP053683.1_4033767_4034346_+	PRK10209, PRK10209, HdeD family acid-resistance protein	NA|546aa|up_6|NZ_CP053683.1_4034425_4036063_-	NA	NA|419aa|up_5|NZ_CP053683.1_4036662_4037919_+	pfam00924, MS_channel, Mechanosensitive ion channel	NA|813aa|up_4|NZ_CP053683.1_4038271_4040710_+	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family	NA|206aa|up_3|NZ_CP053683.1_4040721_4041339_+	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit	NA|259aa|up_2|NZ_CP053683.1_4041342_4042119_+	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only]	NA|181aa|up_1|NZ_CP053683.1_4042234_4042777_-	pfam06041, DUF924, Bacterial protein of unknown function (DUF924)	NA|60aa|up_0|NZ_CP053683.1_4043345_4043525_+	pfam10753, Toxin_GhoT_OrtT, Toxin GhoT_OrtT	NA|219aa|down_0|NZ_CP053683.1_4044839_4045496_-	pfam11041, DUF2612, Protein of unknown function (DUF2612)	NA|396aa|down_1|NZ_CP053683.1_4045492_4046680_-	pfam04865, Baseplate_J, Baseplate J-like protein	NA|115aa|down_2|NZ_CP053683.1_4046672_4047017_-	NA	NA|231aa|down_3|NZ_CP053683.1_4047013_4047706_-	pfam18352, Gp138_N, Phage protein Gp138 N-terminal domain	NA|271aa|down_4|NZ_CP053683.1_4047708_4048521_-	NA	NA|107aa|down_5|NZ_CP053683.1_4048489_4048810_-	NA	NA|163aa|down_6|NZ_CP053683.1_4048822_4049311_-	NA	NA|768aa|down_7|NZ_CP053683.1_4049313_4051617_-	COG5412, COG5412, Phage-related protein [Function unknown]	NA|153aa|down_8|NZ_CP053683.1_4051699_4052158_-	NA	NA|151aa|down_9|NZ_CP053683.1_4052217_4052670_-	NA
