The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP054624	Cupriavidus gilardii strain FDAARGOS_639 chromosome 1, complete sequence	2240840	543473	574064	2240840	plate,holin,capsid	Burkholderia_phage(43.33%)	44	NA	NA
WP_053824308.1|543473_544838_+	replicative DNA helicase	NA	O80281	Escherichia_phage	43.8	3.5e-86
WP_174780832.1|544987_545368_+	hypothetical protein	NA	A0A2K9V425	Faecalibacterium_phage	50.0	1.4e-21
WP_174780833.1|546174_546675_+	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_151023581.1|546671_546944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144425985.1|546936_547134_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174779856.1|547126_547546_+	hypothetical protein	NA	A0A1R3Y5U4	Salmonella_virus	51.7	8.0e-10
WP_174779857.1|547538_547793_+	Lar family restriction alleviation protein	NA	NA	NA	NA	NA
WP_174779858.1|547849_548461_+	helix-turn-helix transcriptional regulator	NA	Q6V7U1	Burkholderia_virus	47.2	2.3e-13
WP_174779859.1|548600_548879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174779860.1|548868_549300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_053824302.1|549351_549780_+	hypothetical protein	NA	C7BGG3	Burkholderia_phage	38.1	6.1e-13
WP_174779861.1|550112_550553_+	hypothetical protein	NA	L7TIB4	Pseudomonas_virus	48.4	8.4e-26
WP_174779862.1|551651_552398_+|capsid	minor capsid protein	capsid	A9YWZ8	Burkholderia_phage	65.2	9.4e-86
WP_174779863.1|552399_552579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174779864.1|552575_553892_+	DUF2213 domain-containing protein	NA	A0A0P0IRE1	Acinetobacter_phage	47.4	1.0e-74
WP_151023563.1|553902_554397_+	hypothetical protein	NA	A0A0P0I8F3	Acinetobacter_phage	55.5	8.2e-38
WP_053824297.1|554410_555445_+	DUF2184 domain-containing protein	NA	A0A0N7IRF2	Acinetobacter_phage	67.3	2.3e-127
WP_174779865.1|555837_556224_+	DUF4054 domain-containing protein	NA	A9YX25	Burkholderia_phage	63.8	1.3e-43
WP_174779866.1|556220_556874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151023561.1|556878_557358_+	hypothetical protein	NA	A9YX26	Burkholderia_phage	66.7	1.0e-48
WP_174779867.1|557360_557732_+	hypothetical protein	NA	A9YX28	Burkholderia_phage	75.6	4.1e-50
WP_174779868.1|557735_558329_+	hypothetical protein	NA	A9YX29	Burkholderia_phage	73.7	1.4e-79
WP_174779869.1|558338_559814_+	DUF3383 domain-containing protein	NA	A0A0P0I492	Acinetobacter_phage	47.7	9.1e-109
WP_174779870.1|559816_560353_+	HNH endonuclease	NA	A0A2I6PGU1	Salmonella_phage	42.4	1.2e-26
WP_174779871.1|560364_560808_+	DUF3277 family protein	NA	A0A0M5M1K6	Salmonella_phage	55.9	7.1e-41
WP_174779872.1|560810_561251_+	hypothetical protein	NA	A0A0N7IRF3	Acinetobacter_phage	38.6	6.2e-21
WP_174780834.1|561247_561433_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174779873.1|561422_563258_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	NA	A0A0M4REK7	Salmonella_phage	34.9	7.5e-44
WP_053821600.1|563257_563833_+	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	37.2	1.2e-19
WP_174779874.1|563832_564150_+	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	39.4	1.1e-14
WP_174779875.1|564146_565115_+	hypothetical protein	NA	A9YX04	Burkholderia_phage	84.8	3.3e-139
WP_151023616.1|565111_565657_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174779876.1|565666_566413_+	hypothetical protein	NA	A9YX06	Burkholderia_phage	77.4	9.0e-105
WP_174779877.1|566409_566874_-	HNH endonuclease	NA	A0A0E3M1E6	Bacillus_phage	38.0	2.6e-17
WP_174780835.1|566899_567253_+	hypothetical protein	NA	A9YX11	Burkholderia_phage	77.8	2.1e-43
WP_174779878.1|567252_568434_+|plate	baseplate J/gp47 family protein	plate	A9YX12	Burkholderia_phage	79.9	6.7e-171
WP_174779879.1|568436_569942_+	DUF2612 domain-containing protein	NA	A9YX13	Burkholderia_phage	34.3	1.4e-64
WP_174779880.1|569951_570962_+	hypothetical protein	NA	A9YX14	Burkholderia_phage	40.7	3.1e-76
WP_174779881.1|570964_571162_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174779882.1|571158_572148_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_174779883.1|572216_572855_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053824277.1|572920_573214_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053824276.1|573400_573619_+|holin	holin	holin	Q8W6S7	Burkholderia_virus	62.9	1.8e-13
WP_174779884.1|573608_574064_+	lysozyme	NA	A0A0A8KXN5	Burkholderia_phage	58.5	1.2e-40
>prophage 1
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	0	17729	3485840	tRNA	Bacillus_virus(50.0%)	15	NA	NA
WP_053820818.1|1054_2764_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_006578231.1|3571_3706_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_151023152.1|3871_4285_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_174780997.1|4299_4560_+	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA	NA
WP_053820821.1|4580_6242_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_151023130.1|6417_7356_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_174780998.1|7375_8809_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
WP_174780999.1|8841_10086_-	MFS transporter	NA	NA	NA	NA	NA
WP_174781000.1|10087_11506_-	amidase	NA	NA	NA	NA	NA
WP_174781001.1|11666_12566_+	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_053820828.1|12685_13402_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	39.7	1.3e-12
WP_174781002.1|13570_13801_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174781003.1|13985_14795_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_174781004.1|14818_15808_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_174781005.1|15953_17729_-	AMP-binding protein	NA	A0A2K9L3I8	Tupanvirus	21.3	1.6e-14
>prophage 2
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	22241	24089	3485840		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_174782384.1|22241_24089_-	Cache 3/Cache 2 fusion domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.8	5.1e-08
>prophage 3
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	42160	43222	3485840		Mycobacterium_phage(100.0%)	1	NA	NA
WP_053820848.1|42160_43222_+	tyrosine recombinase XerC	NA	A0A097EYL9	Mycobacterium_phage	29.6	3.4e-12
>prophage 4
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	47434	49081	3485840		Tupanvirus(100.0%)	1	NA	NA
WP_174781018.1|47434_49081_-	alkaline phosphatase family protein	NA	A0A2K9L1A5	Tupanvirus	25.6	9.2e-17
>prophage 5
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	56328	57195	3485840		Pithovirus(100.0%)	1	NA	NA
WP_053820857.1|56328_57195_-	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	27.3	9.7e-10
>prophage 6
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	60288	60783	3485840		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_174782386.1|60288_60783_-	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.4	4.8e-14
>prophage 7
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	71807	72821	3485840		Dickeya_phage(100.0%)	1	NA	NA
WP_174782390.1|71807_72821_+	homocysteine S-methyltransferase family protein	NA	A0A140XBC7	Dickeya_phage	46.2	5.1e-10
>prophage 8
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	84918	86139	3485840	transposase	Ralstonia_virus(100.0%)	1	NA	NA
WP_174781032.1|84918_86139_-|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	83.3	3.2e-208
>prophage 9
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	102852	105735	3485840		Synechococcus_phage(50.0%)	3	NA	NA
WP_174781043.1|102852_103548_+	HAD family phosphatase	NA	A0A1D8KNV9	Synechococcus_phage	25.3	1.0e-09
WP_174781044.1|103544_104003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174781045.1|104127_105735_+	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	69.4	2.3e-20
>prophage 10
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	118571	119513	3485840		Klosneuvirus(100.0%)	1	NA	NA
WP_053820889.1|118571_119513_+	hydroxymethylglutaryl-CoA lyase	NA	A0A1V0SKU2	Klosneuvirus	35.5	6.4e-39
>prophage 11
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	143955	145287	3485840	protease	Erwinia_phage(100.0%)	1	NA	NA
WP_174781067.1|143955_145287_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	31.1	4.2e-44
>prophage 12
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	161437	162214	3485840		Phaeocystis_globosa_virus(100.0%)	1	NA	NA
WP_053820911.1|161437_162214_-	exodeoxyribonuclease III	NA	R4TWA8	Phaeocystis_globosa_virus	31.6	4.6e-27
>prophage 13
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	167813	173095	3485840		Staphylococcus_phage(50.0%)	5	NA	NA
WP_023264748.1|167813_168977_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.5	3.7e-121
WP_082371369.1|169098_169521_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_174781082.1|169552_170092_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_053820919.1|170315_171269_+	Kdo hydroxylase family protein	NA	NA	NA	NA	NA
WP_174781083.1|171523_173095_+	GMC family oxidoreductase N-terminal domain-containing protein	NA	A0A1V0SI18	Klosneuvirus	24.1	2.5e-16
>prophage 14
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	193494	194913	3485840		Pandoravirus(100.0%)	1	NA	NA
WP_053820934.1|193494_194913_+	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	30.5	4.2e-42
>prophage 15
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	198033	203337	3485840		Pseudomonas_phage(50.0%)	4	NA	NA
WP_151022758.1|198033_200004_+	transglycosylase SLT domain-containing protein	NA	K4NWI2	Pseudomonas_phage	34.1	3.9e-14
WP_053820936.1|200160_201183_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_174781096.1|201378_202068_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_174781097.1|202092_203337_+	multifunctional CCA addition/repair protein	NA	A0A0F6YPT7	Sinorhizobium_phage	45.9	9.8e-80
>prophage 16
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	210879	218724	3485840	tRNA	Escherichia_phage(25.0%)	6	NA	NA
WP_174781100.1|210879_211860_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	69.7	2.7e-101
WP_174782393.1|211953_212790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174781101.1|213140_214514_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L277	Tupanvirus	33.8	2.7e-30
WP_174781102.1|214641_216480_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	45.6	3.4e-145
WP_174781103.1|216634_218038_-	heavy metal sensor histidine kinase	NA	NA	NA	NA	NA
WP_053820946.1|218037_218724_-	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.8	1.3e-30
>prophage 17
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	228712	229651	3485840		Cedratvirus(100.0%)	1	NA	NA
WP_174781111.1|228712_229651_+	hydroxyacid dehydrogenase	NA	A0A2R8FCS0	Cedratvirus	34.6	1.9e-35
>prophage 18
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	239193	240630	3485840		Planktothrix_phage(100.0%)	1	NA	NA
WP_174781117.1|239193_240630_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	2.7e-12
>prophage 19
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	279242	282213	3485840		Catovirus(50.0%)	2	NA	NA
WP_174781134.1|279242_281252_+	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	23.5	1.6e-34
WP_174781135.1|281265_282213_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	26.3	4.5e-16
>prophage 20
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	285840	286656	3485840		Staphylococcus_phage(100.0%)	1	NA	NA
WP_006578243.1|285840_286656_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.4	3.4e-12
>prophage 21
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	291589	296354	3485840		Stx2-converting_phage(50.0%)	4	NA	NA
WP_174781138.1|291589_292795_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	39.5	1.5e-61
WP_053820989.1|292909_293554_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_006578238.1|293624_293945_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174781139.1|294167_296354_-	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	29.9	3.4e-67
>prophage 22
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	310003	311785	3485840		Hokovirus(100.0%)	1	NA	NA
WP_174781148.1|310003_311785_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	27.7	8.1e-11
>prophage 23
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	315524	316274	3485840		Catovirus(100.0%)	1	NA	NA
WP_053821002.1|315524_316274_-	molybdopterin-synthase adenylyltransferase MoeB	NA	A0A1V0SAV8	Catovirus	26.6	2.1e-08
>prophage 24
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	319535	319793	3485840		Rhizobium_phage(100.0%)	1	NA	NA
WP_006579210.1|319535_319793_+	glutaredoxin 3	NA	V9QKN6	Rhizobium_phage	42.9	3.7e-10
>prophage 25
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	327131	328736	3485840		Flavobacterium_phage(100.0%)	1	NA	NA
WP_151023102.1|327131_328736_+	cytochrome c oxidase subunit I	NA	R9VX24	Flavobacterium_phage	35.6	3.8e-07
>prophage 26
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	340755	341685	3485840		Salicola_phage(100.0%)	1	NA	NA
WP_174781158.1|340755_341685_-	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	37.5	9.7e-40
>prophage 27
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	349414	354187	3485840		uncultured_Mediterranean_phage(66.67%)	5	NA	NA
WP_151023096.1|349414_350848_+	insulinase family protein	NA	M1NN74	Moumouvirus	22.8	2.0e-23
WP_082371377.1|350857_352261_+	insulinase family protein	NA	NA	NA	NA	NA
WP_174781162.1|352397_353057_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_006576803.1|353267_353753_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.5	4.3e-31
WP_053821024.1|353926_354187_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	59.1	1.1e-20
>prophage 28
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	358904	359858	3485840		Tupanvirus(100.0%)	1	NA	NA
WP_006576809.1|358904_359858_-	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	33.4	1.4e-41
>prophage 29
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	366804	367686	3485840		Corynebacterium_phage(100.0%)	1	NA	NA
WP_053821033.1|366804_367686_-	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	37.4	1.4e-08
>prophage 30
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	372341	399642	3485840		Staphylococcus_phage(11.11%)	22	NA	NA
WP_043442039.1|372341_373088_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.8e-20
WP_053822969.1|373248_373878_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_053821038.1|373958_374585_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_053822970.1|374593_375577_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	33.6	1.6e-37
WP_006579157.1|375821_377801_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_174781167.1|377862_378435_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	44.5	1.4e-28
WP_082371379.1|378606_380343_+	Na/Pi cotransporter family protein	NA	NA	NA	NA	NA
WP_174781168.1|380428_383326_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	54.6	1.0e-300
WP_053821041.1|383800_385078_+	MFS transporter	NA	NA	NA	NA	NA
WP_174781169.1|385262_385781_+	single-stranded DNA-binding protein	NA	C5IHK5	Burkholderia_virus	68.6	2.7e-47
WP_174781170.1|385998_387216_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_174781171.1|387245_388586_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_174781172.1|388728_390312_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	46.3	3.0e-41
WP_053821046.1|390378_390753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053821047.1|390773_391058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006578114.1|391160_391364_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	63.6	6.1e-16
WP_174781173.1|391667_391832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_053821048.1|391831_391921_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_174781174.1|391920_393729_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_174781175.1|393825_396024_+	potassium-transporting ATPase subunit KdpB	NA	E4ZFI9	Streptococcus_phage	27.6	8.2e-29
WP_174782404.1|396088_396721_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_174781176.1|396789_399642_+	sensor histidine kinase KdpD	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.4	1.3e-10
>prophage 31
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	406701	412614	3485840		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_174781182.1|406701_412614_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	38.1	8.3e-185
>prophage 32
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	417367	421316	3485840		Staphylococcus_phage(50.0%)	4	NA	NA
WP_174781183.1|417367_418366_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.1	2.7e-19
WP_082371381.1|418362_419433_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_174781184.1|419457_420363_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_053821059.1|420482_421316_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	38.0	3.9e-40
>prophage 33
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	435458	435953	3485840		Acinetobacter_phage(100.0%)	1	NA	NA
WP_053822977.1|435458_435953_-	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	41.1	6.3e-22
>prophage 34
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	441727	443644	3485840		Bacillus_phage(100.0%)	1	NA	NA
WP_174781192.1|441727_443644_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	31.1	1.0e-06
>prophage 35
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	446887	451490	3485840		Micromonas_pusilla_virus(50.0%)	4	NA	NA
WP_053821077.1|446887_448462_+	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	M4QMK7	Micromonas_pusilla_virus	33.0	5.8e-37
WP_053821078.1|448746_450183_+	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_174781195.1|450439_450766_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_053821080.1|450779_451490_+	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	27.0	1.7e-12
>prophage 36
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	466098	470231	3485840		Bacillus_phage(50.0%)	3	NA	NA
WP_174781201.1|466098_468024_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	29.7	2.9e-46
WP_174782407.1|468333_469380_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_174782408.1|469382_470231_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.1	2.2e-30
>prophage 37
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	477549	478284	3485840		Planktothrix_phage(100.0%)	1	NA	NA
WP_006578985.1|477549_478284_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.4	6.9e-33
>prophage 38
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	486983	487352	3485840		Lake_Baikal_phage(100.0%)	1	NA	NA
WP_006576927.1|486983_487352_+	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	57.4	8.0e-30
>prophage 39
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	490501	491878	3485840		Gordonia_phage(100.0%)	1	NA	NA
WP_053821105.1|490501_491878_-	M23 family metallopeptidase	NA	A0A2P1JY73	Gordonia_phage	46.2	5.0e-16
>prophage 40
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	500091	507057	3485840	transposase	Mycoplasma_phage(33.33%)	7	NA	NA
WP_174781211.1|500091_501651_+	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	39.9	1.3e-52
WP_053821114.1|501661_502102_+	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_174781212.1|502362_503577_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_174781213.1|503667_504576_-	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	35.0	3.2e-27
WP_174781214.1|504666_505092_-	VOC family protein	NA	NA	NA	NA	NA
WP_053821118.1|505201_505795_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_174781215.1|505836_507057_-|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	83.5	6.4e-209
>prophage 41
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	524752	526303	3485840		Staphylococcus_phage(100.0%)	1	NA	NA
WP_174781227.1|524752_526303_+	malonyl-CoA synthase	NA	A0A2H4PQM9	Staphylococcus_phage	29.3	3.4e-29
>prophage 42
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	530733	532707	3485840		Acinetobacter_phage(100.0%)	1	NA	NA
WP_174781230.1|530733_532707_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	36.8	2.3e-06
>prophage 43
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	553988	556983	3485840	tRNA	Indivirus(50.0%)	2	NA	NA
WP_174781241.1|553988_556073_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	28.0	6.5e-52
WP_023263915.1|556350_556983_-	OmpA family protein	NA	G3M9Z0	Bacillus_virus	37.1	5.6e-07
>prophage 44
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	563446	571109	3485840		Escherichia_phage(50.0%)	7	NA	NA
WP_053821147.1|563446_566476_+	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	22.8	3.6e-19
WP_053821148.1|566486_567176_+	4Fe-4S dicluster domain-containing protein	NA	A0A077SL61	Escherichia_phage	32.6	2.0e-18
WP_053821149.1|567172_567412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144425873.1|567563_568724_+	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_151022196.1|568797_569343_+	superoxide dismutase family protein	NA	M1I3K6	Paramecium_bursaria_Chlorella_virus	42.8	1.7e-23
WP_053821150.1|569436_570267_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
WP_053821151.1|570542_571109_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	70.4	6.2e-74
>prophage 45
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	577946	578595	3485840		Brucella_phage(100.0%)	2	NA	NA
WP_053821156.1|577946_578297_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	51.9	8.1e-16
WP_053821157.1|578277_578595_+	addiction module antidote protein	NA	A0A141GEX5	Brucella_phage	38.6	1.2e-05
>prophage 46
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	589158	590130	3485840		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_006575889.1|589158_590130_+	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	33.5	1.4e-28
>prophage 47
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	593612	600202	3485840		Enterobacteria_phage(66.67%)	7	NA	NA
WP_053821167.1|593612_594677_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	48.9	5.8e-89
WP_174781251.1|594666_595584_+	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	32.8	5.3e-22
WP_053821169.1|595594_596473_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	59.9	6.0e-100
WP_053821170.1|596469_597057_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	57.9	5.9e-51
WP_053821171.1|597161_598577_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	30.8	1.9e-55
WP_174781252.1|598578_599409_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_174781253.1|599413_600202_+	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	28.2	8.6e-05
>prophage 48
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	603268	604384	3485840		Moumouvirus(100.0%)	1	NA	NA
WP_174781254.1|603268_604384_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A2P1ELS7	Moumouvirus	26.5	2.6e-23
>prophage 49
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	623700	624219	3485840		Freshwater_phage(100.0%)	1	NA	NA
WP_053822995.1|623700_624219_-	adenylyl-sulfate kinase	NA	A0A1B0XTK9	Freshwater_phage	39.3	2.4e-08
>prophage 50
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	630994	632380	3485840		Bacillus_phage(100.0%)	1	NA	NA
WP_174781266.1|630994_632380_+	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	29.8	2.5e-55
>prophage 51
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	636029	640532	3485840		Escherichia_phage(33.33%)	6	NA	NA
WP_174781267.1|636029_637193_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	39.0	6.6e-70
WP_053821192.1|637236_637539_-	BrnA antitoxin family protein	NA	NA	NA	NA	NA
WP_174781268.1|637492_637771_-	BrnT family toxin	NA	K4NX81	Burkholderia_phage	64.7	9.9e-25
WP_174781269.1|637981_639376_-	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_006579501.1|639538_639865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053821194.1|639878_640532_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1J0MC50	Streptomyces_phage	38.2	7.8e-12
>prophage 52
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	661381	665091	3485840		Staphylococcus_phage(75.0%)	4	NA	NA
WP_174781278.1|661381_661888_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	34.7	5.7e-18
WP_053821207.1|661955_663065_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	35.7	2.1e-49
WP_174781279.1|663248_663887_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	36.2	4.6e-25
WP_174781280.1|663972_665091_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	33.3	1.7e-46
>prophage 53
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	669115	670363	3485840		Aeromonas_phage(100.0%)	1	NA	NA
WP_053821214.1|669115_670363_-	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	52.1	4.9e-95
>prophage 54
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	676595	679038	3485840		Vibrio_phage(50.0%)	3	NA	NA
WP_053821218.1|676595_677285_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A126HGA1	Vibrio_phage	33.2	8.8e-22
WP_053821219.1|677352_678465_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_174781286.1|678690_679038_-	hypothetical protein	NA	J7HXK7	Pseudomonas_phage	41.2	6.0e-11
>prophage 55
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	694576	699234	3485840		Staphylococcus_phage(50.0%)	4	NA	NA
WP_174781293.1|694576_696187_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	29.3	1.2e-32
WP_053821230.1|696246_696792_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_174782426.1|696847_697888_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_053821231.1|698001_699234_-	class I SAM-dependent methyltransferase	NA	A0A2I2L5L3	Orpheovirus	36.3	2.3e-44
>prophage 56
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	704363	707604	3485840	tRNA	Pandoravirus(50.0%)	4	NA	NA
WP_174781296.1|704363_705272_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	A0A291ATS8	Pandoravirus	32.9	2.5e-16
WP_053821234.1|705364_705943_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_082371403.1|706060_706540_+	bacteriohemerythrin	NA	NA	NA	NA	NA
WP_053821235.1|706758_707604_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	41.1	3.2e-13
>prophage 57
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	714160	715918	3485840	tRNA	Escherichia_phage(100.0%)	1	NA	NA
WP_174781298.1|714160_715918_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	56.6	1.0e-186
>prophage 58
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	737109	739734	3485840	tRNA	Klosneuvirus(100.0%)	1	NA	NA
WP_174781307.1|737109_739734_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	38.7	5.5e-80
>prophage 59
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	743913	748366	3485840		Acinetobacter_phage(33.33%)	3	NA	NA
WP_053821257.1|743913_744612_-	Smr/MutS family protein	NA	A0A0P0IDT4	Acinetobacter_phage	28.8	3.4e-13
WP_174781309.1|744912_745860_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	47.1	3.3e-67
WP_151022164.1|746044_748366_+	DNA translocase FtsK 4TM domain-containing protein	NA	G1FGP1	Mycobacterium_phage	50.3	2.5e-84
>prophage 60
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	753541	757658	3485840	tRNA	Planktothrix_phage(33.33%)	3	NA	NA
WP_082371606.1|753541_754693_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	2.7e-23
WP_053823012.1|754855_756220_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.2	4.7e-75
WP_053821259.1|756344_757658_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	43.8	2.2e-98
>prophage 61
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	776487	781875	3485840		Bacillus_phage(50.0%)	4	NA	NA
WP_174782428.1|776487_778722_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.1	1.2e-59
WP_053821270.1|778734_779229_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_151022227.1|779537_779903_+	RcnB family protein	NA	NA	NA	NA	NA
WP_053823015.1|780054_781875_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.2	2.3e-45
>prophage 62
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	786980	787310	3485840		Burkholderia_phage(100.0%)	1	NA	NA
WP_174782429.1|786980_787310_-	BrnA antitoxin family protein	NA	K4NZP3	Burkholderia_phage	45.5	1.5e-08
>prophage 63
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	790549	801157	3485840		Bacillus_virus(50.0%)	6	NA	NA
WP_174781321.1|790549_791257_+	two-component system response regulator CreB	NA	W8CYM9	Bacillus_phage	35.2	3.0e-33
WP_174781322.1|791271_792726_+	two-component system sensor histidine kinase CreC	NA	NA	NA	NA	NA
WP_174781323.1|792961_794911_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	28.8	1.1e-45
WP_174781324.1|795205_796417_-	MFS transporter	NA	NA	NA	NA	NA
WP_174781325.1|796799_798803_+	type IIA DNA topoisomerase subunit B	NA	G3M9Z3	Bacillus_virus	35.0	2.1e-92
WP_174781326.1|798832_801157_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.0	2.6e-78
>prophage 64
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	814634	837968	3485840	head,capsid,integrase,terminase,protease	uncultured_Caudovirales_phage(27.78%)	27	807783:807798	818250:818265
807783:807798	attL	TGCTGGCGCAGCGCTT	NA	NA	NA	NA
WP_174781338.1|814634_815873_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	B7SYF8	Stenotrophomonas_phage	55.5	1.0e-121
WP_174781339.1|816556_816838_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_174781340.1|816873_817443_+	Hsp20/alpha crystallin family protein	NA	A0A1D7SX46	Cyanophage	27.1	8.1e-05
WP_174782435.1|817540_820390_+	heat shock survival AAA family ATPase ClpK	NA	K4FB40	Cronobacter_phage	41.1	3.1e-129
818250:818265	attR	AAGCGCTGCGCCAGCA	NA	NA	NA	NA
WP_174781341.1|820406_821837_+	cardiolipin synthase	NA	NA	NA	NA	NA
WP_174781342.1|821864_823748_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	C7U047	Ostreococcus_tauri_virus	41.3	2.1e-105
WP_028914928.1|823744_824185_+	thioredoxin TrxC	NA	A0A1J0GW78	Streptomyces_phage	37.9	4.5e-11
WP_174781343.1|824260_824761_+	heat resistance protein PsiE-GI	NA	NA	NA	NA	NA
WP_174781344.1|824738_825704_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_174781345.1|825734_826886_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_174781346.1|826904_827372_-	lysozyme	NA	K4I410	Acidithiobacillus_phage	76.8	3.5e-62
WP_174781347.1|827368_827701_-	DUF2793 domain-containing protein	NA	A0A1L2C906	Pseudomonas_phage	52.9	2.4e-17
WP_009521782.1|828283_828457_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053243729.1|828463_828889_-	hypothetical protein	NA	D6PGA7	uncultured_phage	31.9	3.3e-11
WP_174781348.1|828900_829185_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053243728.1|829184_830195_-|capsid	major capsid protein	capsid	A0A1B2LRS0	Wolbachia_phage	67.0	4.2e-113
WP_009521786.1|830197_830578_-|head	head decoration protein	head	A0A1B2LRT0	Wolbachia_phage	51.2	1.5e-26
WP_174781349.1|830579_831815_-	S49 family peptidase	NA	K4HZZ6	Acidithiobacillus_phage	41.5	3.0e-65
WP_063392223.1|832482_832689_-	hypothetical protein	NA	A0A2H4JCJ9	uncultured_Caudovirales_phage	89.7	3.6e-24
WP_174781350.1|832696_833473_-|terminase	phage terminase large subunit family protein	terminase	A0A2H4JIC6	uncultured_Caudovirales_phage	77.4	1.0e-34
WP_063392224.1|833472_834000_-	hypothetical protein	NA	A0A2H4JCL4	uncultured_Caudovirales_phage	96.0	7.1e-88
WP_063392225.1|834105_834303_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095558445.1|834399_834927_+	DUF3489 domain-containing protein	NA	A0A2H4JE21	uncultured_Caudovirales_phage	88.1	3.4e-42
WP_063392227.1|835027_835387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063392228.1|835487_835856_+	hypothetical protein	NA	A0A2H4JI44	uncultured_Caudovirales_phage	88.5	3.1e-58
WP_063391274.1|837114_837498_+	hypothetical protein	NA	K4HZX2	Acidithiobacillus_phage	94.5	5.7e-63
WP_174781351.1|837494_837968_+	hypothetical protein	NA	K4I1C7	Acidithiobacillus_phage	96.2	1.5e-81
>prophage 65
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	841416	848475	3485840		Bacillus_virus(33.33%)	5	NA	NA
WP_174781353.1|841416_844140_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.1	1.1e-104
WP_053821306.1|844221_844785_+	DUF2059 domain-containing protein	NA	NA	NA	NA	NA
WP_053823020.1|844900_846055_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	43.8	2.0e-79
WP_006576188.1|846191_847289_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_053821308.1|847359_848475_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	27.7	2.4e-16
>prophage 66
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	853883	867393	3485840		Bacillus_phage(25.0%)	13	NA	NA
WP_174781356.1|853883_854381_+	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	37.8	7.3e-10
WP_006576293.1|854718_855042_+	LapA family protein	NA	NA	NA	NA	NA
WP_053821313.1|855045_856293_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_174781357.1|856337_857711_+	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	36.4	1.1e-71
WP_082371610.1|857762_858713_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	27.6	6.5e-15
WP_174781358.1|858739_859735_+	ADP-glyceromanno-heptose 6-epimerase	NA	R9S880	Prochlorococcus_phage	32.8	1.4e-28
WP_174781359.1|859966_860353_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_053821318.1|860699_861998_+	pyrimidine permease	NA	Q9KX94	Enterobacteria_phage	65.4	2.8e-146
WP_053821319.1|862109_863012_+	cysteine synthase CysM	NA	C3U2M1	Lactococcus_phage	43.0	5.7e-53
WP_174781360.1|863078_864191_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_053821321.1|864393_865317_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.0	2.8e-39
WP_174781361.1|865374_866181_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_053821323.1|866358_867393_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	8.3e-32
>prophage 67
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	885213	890009	3485840		Streptomyces_phage(50.0%)	2	NA	NA
WP_174781366.1|885213_888726_+	DNA polymerase III subunit alpha	NA	A0A0K1Y906	Streptomyces_phage	36.1	4.3e-173
WP_174781367.1|888947_890009_-	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	26.7	4.0e-05
>prophage 68
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	893690	895415	3485840		Bacillus_phage(100.0%)	1	NA	NA
WP_174781369.1|893690_895415_+	lipid A export permease/ATP-binding protein MsbA	NA	W8CYL7	Bacillus_phage	27.5	9.8e-54
>prophage 69
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	906044	907598	3485840		Klebsiella_phage(100.0%)	1	NA	NA
WP_053821352.1|906044_907598_+	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	43.0	5.7e-77
>prophage 70
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	915844	917425	3485840		Staphylococcus_phage(100.0%)	1	NA	NA
WP_174781378.1|915844_917425_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	1.1e-19
>prophage 71
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	944400	947937	3485840		NY_014_poxvirus(50.0%)	3	NA	NA
WP_144425879.1|944400_945027_+	guanylate kinase	NA	A0A223FNL1	NY_014_poxvirus	33.7	7.0e-18
WP_006578656.1|945106_945310_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_174782439.1|945528_947937_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A291L9W9	Bordetella_phage	34.3	1.3e-14
>prophage 72
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	951560	952463	3485840		Pandoravirus(100.0%)	1	NA	NA
WP_006579274.1|951560_952463_+	lipid A hydroxylase LpxO	NA	S4VR59	Pandoravirus	40.5	6.7e-38
>prophage 73
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	963044	964061	3485840		Klosneuvirus(100.0%)	1	NA	NA
WP_053821398.1|963044_964061_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	34.4	1.3e-45
>prophage 74
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	974215	975622	3485840		Enterobacteria_phage(100.0%)	1	NA	NA
WP_053821403.1|974215_975622_-	purine permease	NA	Q9KX94	Enterobacteria_phage	28.7	1.3e-27
>prophage 75
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	983451	988506	3485840		Acinetobacter_phage(100.0%)	3	NA	NA
WP_174781412.1|983451_984522_-	xanthine dehydrogenase accessory protein XdhC	NA	A0A0P0IKN7	Acinetobacter_phage	37.1	1.2e-46
WP_174781413.1|984568_986977_-	xanthine dehydrogenase molybdopterin binding subunit	NA	A0A0P0I429	Acinetobacter_phage	56.9	1.5e-238
WP_151022048.1|986994_988506_-	xanthine dehydrogenase small subunit	NA	A0A0P0IVM8	Acinetobacter_phage	54.1	8.4e-134
>prophage 76
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	996020	1000714	3485840		Klosneuvirus(33.33%)	6	NA	NA
WP_174781416.1|996020_996641_+	DUF924 domain-containing protein	NA	A0A1V0SIY0	Klosneuvirus	30.4	1.7e-16
WP_174781417.1|996647_997232_-	TIGR00730 family Rossman fold protein	NA	A0A1V0S9E9	Catovirus	27.1	7.5e-06
WP_174781418.1|997228_997975_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_149319401.1|998103_998583_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_151022041.1|998503_999619_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_151022039.1|999688_1000714_-	metallophosphoesterase family protein	NA	A0A218MKA7	uncultured_virus	46.9	6.9e-63
>prophage 77
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1010998	1013928	3485840	transposase	Micromonas_sp._RCC1109_virus(50.0%)	2	NA	NA
WP_174781423.1|1010998_1012537_+	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	23.4	1.2e-05
WP_174781215.1|1012707_1013928_+|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	83.5	6.4e-209
>prophage 78
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1048631	1050247	3485840		Cedratvirus(50.0%)	2	NA	NA
WP_174781434.1|1048631_1049504_+	urea ABC transporter ATP-binding protein UrtD	NA	A0A1M7XV31	Cedratvirus	21.8	1.8e-08
WP_174781435.1|1049554_1050247_+	urea ABC transporter ATP-binding subunit UrtE	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.7	2.0e-18
>prophage 79
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1062518	1063385	3485840		Serratia_phage(100.0%)	1	NA	NA
WP_174782443.1|1062518_1063385_-	NAD-dependent protein deacetylase	NA	A0A1S6UAC6	Serratia_phage	25.8	2.0e-07
>prophage 80
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1081855	1082935	3485840		Escherichia_phage(100.0%)	1	NA	NA
WP_006578951.1|1081855_1082935_-	3-deoxy-7-phosphoheptulonate synthase AroG	NA	A0A218MA87	Escherichia_phage	47.0	6.5e-80
>prophage 81
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1093975	1095619	3485840		Bacillus_phage(100.0%)	1	NA	NA
WP_174781455.1|1093975_1095619_-	S8 family peptidase	NA	A0A217EQY2	Bacillus_phage	27.1	7.0e-09
>prophage 82
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1119489	1133388	3485840	tRNA	uncultured_virus(14.29%)	14	NA	NA
WP_053821503.1|1119489_1119894_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	82.3	2.3e-54
WP_023263777.1|1119917_1120238_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	53.3	6.1e-26
WP_053821504.1|1120355_1120874_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_174781465.1|1120996_1122862_+	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	40.3	2.3e-104
WP_053821506.1|1122907_1123246_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_006577719.1|1123313_1123508_+	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_174781466.1|1123575_1125108_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	35.1	4.2e-80
WP_174781467.1|1125149_1125932_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_144425760.1|1126019_1127124_-	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	40.3	7.5e-07
WP_151023243.1|1127448_1128195_+	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA	NA
WP_174781468.1|1128305_1130003_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.6	3.5e-64
WP_174781469.1|1130094_1131246_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053821509.1|1131386_1132637_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_144425880.1|1132641_1133388_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	42.5	1.1e-38
>prophage 83
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1145463	1149853	3485840		Only_Syngen_Nebraska_virus(33.33%)	4	NA	NA
WP_053821518.1|1145463_1147119_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.6	6.3e-151
WP_053821519.1|1147144_1148014_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	41.1	6.9e-48
WP_053821520.1|1148142_1148433_+	DUF1330 domain-containing protein	NA	NA	NA	NA	NA
WP_006576077.1|1148563_1149853_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	64.1	9.6e-155
>prophage 84
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1153742	1157809	3485840		Tupanvirus(50.0%)	3	NA	NA
WP_174781479.1|1153742_1155515_-	AMP-binding protein	NA	A0A2K9L3I8	Tupanvirus	24.1	3.1e-18
WP_174782450.1|1155773_1156667_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_174781480.1|1156714_1157809_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	25.1	3.8e-11
>prophage 85
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1164517	1165306	3485840		Paenibacillus_phage(100.0%)	1	NA	NA
WP_053821531.1|1164517_1165306_+	MBL fold metallo-hydrolase	NA	A0A2I7SDH3	Paenibacillus_phage	32.1	4.7e-27
>prophage 86
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1168744	1172236	3485840		Indivirus(33.33%)	3	NA	NA
WP_170265930.1|1168744_1171501_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	23.5	6.9e-25
WP_174781486.1|1171603_1172020_-	type II toxin-antitoxin system HicB family antitoxin	NA	F1C593	Cronobacter_phage	60.4	4.5e-37
WP_053821538.1|1172059_1172236_-	type II toxin-antitoxin system HicA family toxin	NA	A0A0R6PD93	Moraxella_phage	60.0	3.7e-09
>prophage 87
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1176379	1180073	3485840	tRNA	Aureococcus_anophage(50.0%)	4	NA	NA
WP_023264649.1|1176379_1176880_-	peptidyl-prolyl cis-trans isomerase	NA	A0A076FI46	Aureococcus_anophage	34.6	1.2e-12
WP_053821542.1|1176892_1177510_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_174782451.1|1177662_1178421_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_174781488.1|1178684_1180073_+|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	33.4	3.1e-42
>prophage 88
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1199090	1204480	3485840		Pandoravirus(100.0%)	4	NA	NA
WP_053821559.1|1199090_1200440_-	O-acetylhomoserine aminocarboxypropyltransferase	NA	A0A0B5JD48	Pandoravirus	26.8	5.9e-14
WP_006578180.1|1200750_1201197_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_174781498.1|1201367_1203275_+	MFS transporter	NA	NA	NA	NA	NA
WP_174781499.1|1203367_1204480_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	45.9	1.4e-80
>prophage 89
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1222494	1232811	3485840	tRNA	Tupanvirus(16.67%)	12	NA	NA
WP_174781506.1|1222494_1224402_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	37.1	2.0e-124
WP_082371427.1|1224443_1224965_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.9	5.6e-13
WP_006575466.1|1225125_1225323_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_006575465.1|1225351_1225708_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_174782454.1|1225887_1226925_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	37.3	1.5e-25
WP_174781507.1|1227045_1229493_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_023265013.1|1229554_1229971_+	integration host factor subunit alpha	NA	A0A1P8CWT5	Bacillus_phage	40.0	3.8e-12
WP_053821573.1|1230117_1230561_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_174781508.1|1230787_1231342_-	hypothetical protein	NA	A0A2H4J8E5	uncultured_Caudovirales_phage	41.1	5.4e-14
WP_174781509.1|1231399_1231642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174781510.1|1231646_1232060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174781511.1|1232229_1232811_+	DUF2514 family protein	NA	Q6J1Q4	Burkholderia_virus	53.4	4.2e-17
>prophage 90
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1239745	1243264	3485840		uncultured_Caudovirales_phage(50.0%)	3	NA	NA
WP_174781518.1|1239745_1241350_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	40.9	3.3e-11
WP_053821590.1|1241469_1242552_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_053821591.1|1242703_1243264_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	35.3	3.8e-15
>prophage 91
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1246659	1247316	3485840		Faecalibacterium_phage(100.0%)	1	NA	NA
WP_053821608.1|1246659_1247316_-	transcriptional repressor LexA	NA	A0A2K9V3G4	Faecalibacterium_phage	34.1	3.4e-15
>prophage 92
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1250469	1259736	3485840		Burkholderia_phage(25.0%)	9	NA	NA
WP_006575385.1|1250469_1251861_+	replicative DNA helicase	NA	C7BGG1	Burkholderia_phage	58.9	1.8e-138
WP_006575384.1|1252054_1252681_+	DUF47 domain-containing protein	NA	NA	NA	NA	NA
WP_053821611.1|1252702_1253713_+	inorganic phosphate transporter	NA	NA	NA	NA	NA
WP_082371617.1|1253806_1254523_-	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	40.9	8.0e-18
WP_174781520.1|1254588_1255128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053821612.1|1255145_1256849_-	PhoH family protein	NA	A0A2I7SAD7	Vibrio_phage	36.5	5.1e-71
WP_053821613.1|1257095_1257557_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_174781521.1|1257751_1258141_-	Xcc1710-like domain-containing protein	NA	NA	NA	NA	NA
WP_174781522.1|1258503_1259736_+	pyridoxal phosphate-dependent aminotransferase	NA	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	32.5	7.9e-05
>prophage 93
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1264907	1265288	3485840		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_053821619.1|1264907_1265288_+	fluoride efflux transporter CrcB	NA	A0A2H4J148	uncultured_Caudovirales_phage	48.6	1.6e-20
>prophage 94
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1269388	1273983	3485840		Planktothrix_phage(50.0%)	4	NA	NA
WP_053821623.1|1269388_1270153_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	24.4	4.3e-09
WP_172682454.1|1270269_1271253_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_174781526.1|1271315_1272386_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_174781527.1|1272435_1273983_+	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	27.6	4.7e-47
>prophage 95
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1277363	1280533	3485840		Cronobacter_phage(50.0%)	2	NA	NA
WP_174781529.1|1277363_1279952_+	ATP-dependent chaperone ClpB	NA	K4FB40	Cronobacter_phage	37.3	2.0e-119
WP_174781530.1|1280176_1280533_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	36.6	1.4e-07
>prophage 96
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1286082	1287234	3485840		Bacillus_virus(100.0%)	1	NA	NA
WP_174781535.1|1286082_1287234_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.6	4.9e-25
>prophage 97
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1299697	1302444	3485840	tRNA	Catovirus(50.0%)	4	NA	NA
WP_174781538.1|1299697_1299967_-	acyl-CoA-binding protein	NA	A0A1V0S9E7	Catovirus	34.4	1.3e-05
WP_174781539.1|1300085_1300877_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_174781540.1|1300873_1301443_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_174781541.1|1301439_1302444_+	uracil-DNA glycosylase	NA	A0A1P8DII7	Virus_Rctr197k	37.5	5.8e-06
>prophage 98
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1309518	1313471	3485840		Bacillus_phage(50.0%)	2	NA	NA
WP_174781545.1|1309518_1311360_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.4	7.1e-34
WP_174781546.1|1311518_1313471_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	29.4	1.1e-61
>prophage 99
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1328506	1332014	3485840		Ralstonia_phage(50.0%)	3	NA	NA
WP_174781554.1|1328506_1330681_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	45.6	2.0e-144
WP_174781555.1|1330871_1331339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174781556.1|1331477_1332014_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	37.4	7.6e-13
>prophage 100
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1341310	1342081	3485840		Flavobacterium_phage(100.0%)	1	NA	NA
WP_006578099.1|1341310_1342081_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	38.1	2.4e-20
>prophage 101
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1352460	1365953	3485840		Hokovirus(40.0%)	13	NA	NA
WP_082371621.1|1352460_1353207_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	39.9	3.2e-25
WP_174781564.1|1353256_1354036_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_053821668.1|1354147_1354999_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_053821669.1|1355275_1357660_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	36.5	1.2e-166
WP_053821670.1|1357849_1358275_+	NfeD family protein	NA	NA	NA	NA	NA
WP_053821671.1|1358401_1359334_+	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA	NA
WP_006579356.1|1359451_1359904_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	42.8	8.6e-26
WP_006579355.1|1360130_1360568_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_082371445.1|1360554_1360923_+	RnfH family protein	NA	NA	NA	NA	NA
WP_174781565.1|1360939_1361995_-	DMT family transporter	NA	NA	NA	NA	NA
WP_151022927.1|1362131_1363595_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.8	1.0e-96
WP_174781566.1|1363744_1364359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023264342.1|1364333_1365953_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.4	4.0e-17
>prophage 102
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1384270	1385218	3485840		Burkholderia_virus(100.0%)	1	NA	NA
WP_174782461.1|1384270_1385218_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	29.3	3.4e-16
>prophage 103
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1410781	1412128	3485840		Enterobacteria_phage(100.0%)	1	NA	NA
WP_174781591.1|1410781_1412128_+	purine permease	NA	Q9KX94	Enterobacteria_phage	28.6	1.6e-22
>prophage 104
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1416889	1422957	3485840	tRNA,transposase	Halovirus(20.0%)	6	NA	NA
WP_053821706.1|1416889_1417525_+	7-carboxy-7-deazaguanine synthase	NA	R4TAH8	Halovirus	32.9	4.3e-07
WP_174781595.1|1417558_1418035_+	6-carboxytetrahydropterin synthase QueD	NA	A0A1U9WRB3	Streptococcus_virus	29.7	6.7e-13
WP_174781596.1|1418090_1418720_+|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	31.8	1.0e-08
WP_174781597.1|1418716_1419658_+	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_174781598.1|1419965_1421588_+	ABC-F family ATPase	NA	A0A2K9L0W2	Tupanvirus	26.9	1.2e-50
WP_174780257.1|1421736_1422957_+|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	83.3	4.2e-208
>prophage 105
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1442441	1442912	3485840		Tupanvirus(100.0%)	1	NA	NA
WP_053821711.1|1442441_1442912_-	VOC family protein	NA	A0A2K9L4N3	Tupanvirus	42.5	8.1e-27
>prophage 106
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1459502	1460692	3485840		uncultured_Caudovirales_phage(100.0%)	2	NA	NA
WP_174781616.1|1459502_1460267_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	71.1	1.1e-89
WP_053821724.1|1460263_1460692_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	69.3	1.1e-49
>prophage 107
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1467037	1471402	3485840		Leptospira_phage(50.0%)	3	NA	NA
WP_174781622.1|1467037_1470142_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	23.4	2.3e-61
WP_174781623.1|1470195_1470582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174781624.1|1470628_1471402_-	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	29.2	1.4e-12
>prophage 108
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1504593	1509222	3485840		Prochlorococcus_phage(33.33%)	3	NA	NA
WP_174781644.1|1504593_1505631_+	zinc-dependent alcohol dehydrogenase family protein	NA	A0A0K0KVL7	Prochlorococcus_phage	24.6	4.6e-14
WP_174781645.1|1505653_1508380_+	HAD-IC family P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	27.2	6.1e-66
WP_174781646.1|1508376_1509222_+	universal stress protein	NA	A0A2H4J154	uncultured_Caudovirales_phage	28.9	2.4e-05
>prophage 109
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1513436	1517042	3485840		Synechococcus_phage(50.0%)	3	NA	NA
WP_174782474.1|1513436_1514426_-	zinc-dependent alcohol dehydrogenase family protein	NA	E3SJ82	Synechococcus_phage	35.2	7.5e-06
WP_174781650.1|1514770_1515610_+	universal stress protein	NA	NA	NA	NA	NA
WP_174781651.1|1515683_1517042_+	MBL fold metallo-hydrolase	NA	Q331V3	Clostridium_botulinum_C_phage	27.6	1.3e-16
>prophage 110
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1533350	1533728	3485840		uncultured_virus(100.0%)	1	NA	NA
WP_174781666.1|1533350_1533728_+	YnfA family protein	NA	A0A218MNG8	uncultured_virus	58.6	6.1e-25
>prophage 111
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1550423	1552769	3485840		Salmonella_phage(100.0%)	1	NA	NA
WP_174782476.1|1550423_1552769_-	TonB-dependent receptor	NA	A0A1B0VCF0	Salmonella_phage	24.2	4.3e-12
>prophage 112
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1558473	1559250	3485840		Planktothrix_phage(100.0%)	1	NA	NA
WP_174782477.1|1558473_1559250_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	27.9	1.3e-16
>prophage 113
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1608094	1611235	3485840		Mycobacterium_phage(100.0%)	1	NA	NA
WP_174781703.1|1608094_1611235_-	DNA translocase FtsK 4TM domain-containing protein	NA	S5VNE3	Mycobacterium_phage	47.9	3.3e-84
>prophage 114
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1618714	1622886	3485840		Bacteriophage(50.0%)	5	NA	NA
WP_174781707.1|1618714_1619329_-	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	36.9	4.2e-23
WP_174781708.1|1619346_1620342_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_174781709.1|1620648_1621656_+	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_053821873.1|1621704_1621995_+	DUF4936 family protein	NA	NA	NA	NA	NA
WP_006579546.1|1622043_1622886_+	NRDE family protein	NA	A0A0M3ZEJ9	Turkeypox_virus	31.6	4.7e-25
>prophage 115
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1629163	1629700	3485840		Scale_drop_disease_virus(100.0%)	1	NA	NA
WP_174781713.1|1629163_1629700_+	O-acetyl-ADP-ribose deacetylase	NA	A0A0K1L687	Scale_drop_disease_virus	43.4	3.1e-30
>prophage 116
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1643414	1644928	3485840		Brazilian_cedratvirus(50.0%)	2	NA	NA
WP_053821890.1|1643414_1644128_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	26.8	2.8e-15
WP_174781722.1|1644127_1644928_-	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	26.7	5.8e-09
>prophage 117
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1648760	1652472	3485840		Catovirus(50.0%)	2	NA	NA
WP_174781724.1|1648760_1650386_-	fatty-acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	24.7	1.7e-15
WP_174781725.1|1650840_1652472_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	30.4	9.3e-38
>prophage 118
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1666741	1672320	3485840		uncultured_Caudovirales_phage(50.0%)	2	NA	NA
WP_174781731.1|1666741_1669534_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.5	2.2e-42
WP_174781732.1|1669587_1672320_-	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	30.7	7.7e-85
>prophage 119
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1682336	1682603	3485840		Burkholderia_phage(100.0%)	1	NA	NA
WP_006575567.1|1682336_1682603_+	PAAR domain-containing protein	NA	E5E3Y0	Burkholderia_phage	49.4	7.8e-11
>prophage 120
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1691403	1695450	3485840		Burkholderia_phage(100.0%)	1	NA	NA
WP_174781742.1|1691403_1695450_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	74.9	2.4e-183
>prophage 121
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1713344	1714043	3485840		Planktothrix_phage(100.0%)	1	NA	NA
WP_053823111.1|1713344_1714043_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.1	5.8e-37
>prophage 122
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1717475	1722292	3485840	protease	Moraxella_phage(33.33%)	3	NA	NA
WP_053821926.1|1717475_1719890_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	53.3	6.1e-227
WP_006575958.1|1720133_1721408_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.0	1.6e-133
WP_053821927.1|1721641_1722292_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	54.4	2.8e-54
>prophage 123
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1738672	1739395	3485840		Bacillus_phage(100.0%)	1	NA	NA
WP_006576352.1|1738672_1739395_+	two-component system response regulator OmpR	NA	W8CYM9	Bacillus_phage	35.8	1.4e-33
>prophage 124
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1771683	1773858	3485840		Bacillus_phage(100.0%)	1	NA	NA
WP_174782495.1|1771683_1773858_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.3	1.3e-79
>prophage 125
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1777563	1781420	3485840		Acanthocystis_turfacea_chlorella_virus(33.33%)	3	NA	NA
WP_174781764.1|1777563_1779462_-	potassium transporter Kup	NA	A7K9V6	Acanthocystis_turfacea_chlorella_virus	30.6	2.9e-51
WP_053823115.1|1779855_1780557_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.4	3.0e-09
WP_174781765.1|1780562_1781420_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	2.6e-15
>prophage 126
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1784909	1786553	3485840		Staphylococcus_phage(100.0%)	1	NA	NA
WP_174781767.1|1784909_1786553_-	benzoate-CoA ligase family protein	NA	A0A2H4PQU7	Staphylococcus_phage	35.3	2.6e-48
>prophage 127
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1796325	1797120	3485840		Indivirus(100.0%)	1	NA	NA
WP_006578408.1|1796325_1797120_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.1	7.8e-06
>prophage 128
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1806770	1810817	3485840	transposase	Ralstonia_virus(50.0%)	4	NA	NA
WP_174781215.1|1806770_1807991_+|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	83.5	6.4e-209
WP_174782497.1|1808221_1808545_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_053821992.1|1808565_1808886_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_174781774.1|1809020_1810817_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.4	2.1e-35
>prophage 129
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1819433	1825455	3485840		Enterococcus_phage(33.33%)	4	NA	NA
WP_174781777.1|1819433_1820285_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	38.0	7.8e-36
WP_174781778.1|1820408_1822496_+	M3 family metallopeptidase	NA	A0A1V0SD92	Indivirus	22.0	3.5e-37
WP_053823120.1|1822600_1823398_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_174782498.1|1823733_1825455_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	25.8	8.4e-21
>prophage 130
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1844582	1849287	3485840		Cronobacter_phage(50.0%)	4	NA	NA
WP_174781788.1|1844582_1845536_+	glycosyltransferase family 2 protein	NA	F1C5B0	Cronobacter_phage	57.1	2.3e-92
WP_174781789.1|1845525_1845927_+	GtrA family protein	NA	NA	NA	NA	NA
WP_174781790.1|1845919_1847986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174781791.1|1848057_1849287_+	FkbM family methyltransferase	NA	A0A0A0V284	uncultured_virus	29.0	8.4e-07
>prophage 131
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1858124	1861001	3485840		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_053822013.1|1858124_1861001_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.2	5.7e-22
>prophage 132
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1865177	1866095	3485840		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_174781796.1|1865177_1866095_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	35.7	2.8e-23
>prophage 133
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1874140	1879666	3485840		uncultured_virus(50.0%)	3	NA	NA
WP_174781802.1|1874140_1876777_-	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	28.9	2.6e-58
WP_053822025.1|1876913_1878011_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_174781803.1|1878229_1879666_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	1.5e-44
>prophage 134
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1884484	1886387	3485840		Only_Syngen_Nebraska_virus(50.0%)	2	NA	NA
WP_174781805.1|1884484_1885261_-	glycerophosphodiester phosphodiesterase	NA	A0A1J0F961	Only_Syngen_Nebraska_virus	33.2	2.5e-17
WP_053822029.1|1885262_1886387_-	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	32.8	7.1e-21
>prophage 135
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1901687	1902866	3485840		Ectocarpus_siliculosus_virus(100.0%)	1	NA	NA
WP_174781814.1|1901687_1902866_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	3.1e-06
>prophage 136
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1910039	1927645	3485840		uncultured_Caudovirales_phage(16.67%)	13	NA	NA
WP_174781818.1|1910039_1911029_-	YncE family protein	NA	A0A2H4JCI3	uncultured_Caudovirales_phage	76.5	6.7e-07
WP_174781819.1|1911261_1915377_-	ATP-dependent RNA helicase HrpA	NA	A0A1V0SBU4	Catovirus	27.9	8.1e-46
WP_170265957.1|1915544_1916894_+	amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
WP_006577139.1|1917009_1917282_+	oxidative damage protection protein	NA	NA	NA	NA	NA
WP_053822048.1|1917405_1918092_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_053823127.1|1918353_1919307_+	transaldolase	NA	A0A1D8KN73	Synechococcus_phage	30.3	1.2e-13
WP_053822049.1|1919335_1920079_-	NAD-dependent deacylase	NA	A0A220NU33	Escherichia_phage	33.0	1.1e-14
WP_174781820.1|1920133_1920880_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_174781821.1|1921114_1923751_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	31.6	3.1e-67
WP_174781822.1|1924379_1924814_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_174781823.1|1924903_1925524_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_053822054.1|1925621_1926185_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_174781824.1|1926304_1927645_-	adenylosuccinate synthase	NA	G5CQQ4	Megavirus	36.2	1.6e-75
>prophage 137
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1942975	1954553	3485840		uncultured_Mediterranean_phage(28.57%)	12	NA	NA
WP_053822063.1|1942975_1943401_-	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	42.9	1.6e-21
WP_006577118.1|1943737_1944442_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA	NA
WP_082371496.1|1944521_1946006_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	24.8	5.2e-27
WP_174781829.1|1946103_1946964_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_151023340.1|1947006_1947849_-	ribonuclease H-like domain-containing protein	NA	NA	NA	NA	NA
WP_053822065.1|1947845_1949012_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.8	1.4e-32
WP_053822066.1|1949018_1949876_-	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	31.1	9.3e-05
WP_174781830.1|1949884_1950811_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	47.1	7.2e-35
WP_053822067.1|1950856_1951609_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.4	7.5e-67
WP_174781831.1|1951801_1952776_+	NADPH:quinone oxidoreductase family protein	NA	NA	NA	NA	NA
WP_053822069.1|1952867_1953659_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_174781832.1|1953740_1954553_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.1	1.4e-29
>prophage 138
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1961686	1966666	3485840		Bacteriophage(50.0%)	2	NA	NA
WP_174781835.1|1961686_1964005_-	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	40.3	1.4e-42
WP_174781836.1|1964152_1966666_-	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	NA	M4QT32	Loktanella_phage	39.6	1.2e-145
>prophage 139
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1974840	1975167	3485840		Streptomyces_phage(100.0%)	1	NA	NA
WP_006578220.1|1974840_1975167_+	thioredoxin TrxA	NA	A0A1J0GW78	Streptomyces_phage	44.1	6.2e-18
>prophage 140
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	1984133	1987947	3485840		Faustovirus(33.33%)	3	NA	NA
WP_174781841.1|1984133_1985072_+	patatin-like phospholipase family protein	NA	A0A141ZNL4	Faustovirus	25.0	4.9e-07
WP_053822081.1|1985183_1985861_-	C40 family peptidase	NA	B6V2P9	Bacillus_phage	38.5	5.2e-19
WP_174781842.1|1986240_1987947_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.9	2.4e-20
>prophage 141
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2001146	2012722	3485840		Bacillus_phage(50.0%)	10	NA	NA
WP_053822091.1|2001146_2002466_-	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	36.0	2.7e-35
WP_006576605.1|2002623_2003331_-	phosphate regulon transcriptional regulator PhoB	NA	W8CYM9	Bacillus_phage	39.4	4.6e-34
WP_053823135.1|2003487_2004192_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_006576607.1|2004266_2005055_-	phosphate ABC transporter ATP-binding protein PstB	NA	W8CYL7	Bacillus_phage	31.5	7.0e-15
WP_053822092.1|2005126_2006038_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_174781851.1|2006034_2007000_-	phosphate ABC transporter permease PstC	NA	NA	NA	NA	NA
WP_053822094.1|2007105_2008137_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4SNR3	Cyanophage	40.1	3.3e-49
WP_174781852.1|2008374_2009718_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_082371498.1|2009805_2010681_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	36.2	1.7e-25
WP_006576612.1|2010838_2012722_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5ESM9	Bathycoccus_sp._RCC1105_virus	47.7	8.1e-110
>prophage 142
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2019698	2024019	3485840		Halovirus(50.0%)	4	NA	NA
WP_053822101.1|2019698_2020835_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	32.9	1.3e-46
WP_151022874.1|2021347_2021758_-	RidA family protein	NA	NA	NA	NA	NA
WP_174781857.1|2021848_2022352_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_174781858.1|2022348_2024019_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	29.6	1.2e-48
>prophage 143
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2029570	2031463	3485840		Staphylococcus_phage(100.0%)	1	NA	NA
WP_174781861.1|2029570_2031463_-	propionate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	32.9	7.4e-63
>prophage 144
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2035232	2036418	3485840		Virus_Rctr71(50.0%)	2	NA	NA
WP_053822109.1|2035232_2035682_+	ribonuclease HI	NA	A0A1P8DJF0	Virus_Rctr71	49.3	5.0e-34
WP_053823139.1|2035692_2036418_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	39.0	9.2e-38
>prophage 145
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2043636	2048003	3485840		Bacillus_virus(33.33%)	4	NA	NA
WP_174781865.1|2043636_2044770_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.0	4.1e-16
WP_174781866.1|2044774_2045968_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.9	3.8e-12
WP_053822117.1|2046175_2046943_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_174781867.1|2047136_2048003_-	formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	41.4	5.2e-11
>prophage 146
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2075453	2078493	3485840	transposase	Hokovirus(50.0%)	2	NA	NA
WP_174781886.1|2075453_2076872_-	protein kinase	NA	A0A1V0SH95	Hokovirus	28.1	1.4e-10
WP_174781032.1|2077272_2078493_-|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	83.3	3.2e-208
>prophage 147
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2094059	2096405	3485840		Bacillus_phage(100.0%)	1	NA	NA
WP_174781893.1|2094059_2096405_+	type I secretion system permease/ATPase	NA	W8CYL7	Bacillus_phage	29.7	4.2e-23
>prophage 148
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2099722	2108974	3485840		Staphylococcus_phage(33.33%)	6	NA	NA
WP_174781895.1|2099722_2101705_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	43.3	4.6e-79
WP_174782505.1|2102139_2103165_+	DMT family transporter	NA	NA	NA	NA	NA
WP_043441654.1|2103175_2103724_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	31.3	1.1e-22
WP_174781896.1|2103941_2105465_+	fumarate hydratase	NA	NA	NA	NA	NA
WP_053822146.1|2105736_2106573_+	glutamate racemase	NA	NA	NA	NA	NA
WP_174781897.1|2106673_2108974_-	AAA family ATPase	NA	A0A1C9EGA6	Acidianus_two-tailed_virus	31.5	1.3e-08
>prophage 149
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2126870	2138327	3485840	protease	Acanthocystis_turfacea_Chlorella_virus(16.67%)	11	NA	NA
WP_006578554.1|2126870_2127641_-	ribonuclease III	NA	M1HJV4	Acanthocystis_turfacea_Chlorella_virus	35.7	1.9e-17
WP_053822159.1|2127700_2128600_-	signal peptidase I	NA	NA	NA	NA	NA
WP_006578556.1|2128698_2130492_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.9	4.2e-23
WP_053822161.1|2130878_2132363_-|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	35.7	9.4e-21
WP_174781905.1|2132545_2133619_-	MucB/RseB C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_053822162.1|2133627_2134266_-	sigma-E factor negative regulatory protein	NA	NA	NA	NA	NA
WP_006578764.1|2134374_2134974_-	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	28.7	2.0e-06
WP_174781906.1|2135159_2135600_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053822164.1|2135667_2136900_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_006577662.1|2137198_2137438_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	45.9	2.4e-11
WP_053822165.1|2137577_2138327_-	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	33.7	1.1e-20
>prophage 150
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2157318	2170285	3485840		uncultured_Mediterranean_phage(20.0%)	12	NA	NA
WP_174781912.1|2157318_2158341_-	D-glycerate dehydrogenase	NA	A0A1B1IVB5	uncultured_Mediterranean_phage	27.8	3.8e-13
WP_174782507.1|2158349_2159768_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_174781913.1|2159916_2160603_-	lactate utilization protein C	NA	NA	NA	NA	NA
WP_053822179.1|2160700_2161876_-	nicotinate phosphoribosyltransferase	NA	A0A2L0UZQ6	Agrobacterium_phage	34.6	2.3e-54
WP_053822180.1|2162222_2162546_+	ferredoxin family protein	NA	NA	NA	NA	NA
WP_006578042.1|2162655_2163762_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.4	1.8e-16
WP_006578041.1|2164354_2164567_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_170265984.1|2164808_2165210_+	VanZ family protein	NA	NA	NA	NA	NA
WP_053822181.1|2165346_2166258_+	nodulation factor ABC transporter ATP-binding protein NodI	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.7	4.3e-32
WP_174781914.1|2166322_2167192_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_174781915.1|2167345_2168551_-	O-succinylhomoserine sulfhydrylase	NA	NA	NA	NA	NA
WP_174781916.1|2168758_2170285_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	40.9	2.3e-86
>prophage 151
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2175251	2176241	3485840		Phaeocystis_globosa_virus(100.0%)	1	NA	NA
WP_082371507.1|2175251_2176241_-	site-specific DNA-methyltransferase	NA	R4THJ7	Phaeocystis_globosa_virus	32.9	1.0e-31
>prophage 152
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2186390	2188190	3485840		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_174781922.1|2186390_2188190_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	46.5	1.0e-13
>prophage 153
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2208882	2210790	3485840		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_174781929.1|2208882_2210790_-	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.4	1.1e-117
>prophage 154
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2215352	2215817	3485840		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_053822206.1|2215352_2215817_+	RidA family protein	NA	M1I5B0	Acanthocystis_turfacea_Chlorella_virus	38.4	6.1e-19
>prophage 155
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2219995	2221216	3485840	transposase	Ralstonia_virus(100.0%)	1	NA	NA
WP_174781215.1|2219995_2221216_+|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	83.5	6.4e-209
>prophage 156
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2224438	2226590	3485840		Pseudomonas_phage(33.33%)	3	NA	NA
WP_053822210.1|2224438_2225137_+	TerC family protein	NA	W8EBD0	Pseudomonas_phage	43.4	5.4e-27
WP_174781932.1|2225307_2226102_+	thymidylate synthase	NA	A6M9A2	Geobacillus_virus	68.9	1.8e-111
WP_053822212.1|2226098_2226590_+	dihydrofolate reductase	NA	A0A0A8JB64	Ralstonia_phage	47.4	2.8e-30
>prophage 157
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2230608	2231289	3485840		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_174781936.1|2230608_2231289_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	39.3	1.3e-28
>prophage 158
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2238185	2239691	3485840		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_174781941.1|2238185_2239691_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.3	7.5e-50
>prophage 159
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2248941	2260949	3485840	tRNA,protease	Yellowstone_lake_phycodnavirus(20.0%)	9	NA	NA
WP_174781948.1|2248941_2251335_-	DNA polymerase II	NA	A0A0P0YM26	Yellowstone_lake_phycodnavirus	25.9	1.6e-30
WP_174782511.1|2251468_2252257_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_053822229.1|2252256_2252475_-	KTSC domain-containing protein	NA	NA	NA	NA	NA
WP_144425818.1|2252760_2255340_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.8	2.6e-34
WP_174781949.1|2255556_2257368_-	DNA primase	NA	A0A1S5RH32	Helicobacter_phage	33.7	7.9e-46
WP_053822232.1|2257556_2258006_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	47.6	7.0e-20
WP_006576196.1|2258158_2258371_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_174781950.1|2258442_2259684_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_053822233.1|2259914_2260949_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	53.1	2.0e-94
>prophage 160
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2273694	2287619	3485840	tRNA	Bacillus_phage(40.0%)	9	NA	NA
WP_174781956.1|2273694_2276508_-	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	30.9	1.8e-68
WP_151022577.1|2276512_2277481_+	TIGR00730 family Rossman fold protein	NA	A0A1D8KU27	Synechococcus_phage	40.2	2.5e-22
WP_174781957.1|2277575_2278100_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174781958.1|2278279_2279263_+	homoserine kinase	NA	NA	NA	NA	NA
WP_053823160.1|2279330_2280122_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174781959.1|2280206_2282567_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	34.8	3.7e-104
WP_174781960.1|2282667_2283366_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_174781961.1|2283735_2286603_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.8	2.1e-141
WP_006578933.1|2286749_2287619_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.1	2.4e-69
>prophage 161
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2294965	2295793	3485840		Acanthamoeba_polyphaga_lentillevirus(100.0%)	1	NA	NA
WP_174781968.1|2294965_2295793_+	slipin family protein	NA	J3IZE5	Acanthamoeba_polyphaga_lentillevirus	31.6	5.1e-24
>prophage 162
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2303121	2303649	3485840		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_006577062.1|2303121_2303649_-	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	56.6	9.0e-51
>prophage 163
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2317204	2318248	3485840		Salmonella_phage(100.0%)	1	NA	NA
WP_174781976.1|2317204_2318248_-	glycosyltransferase family 2 protein	NA	A8CG95	Salmonella_phage	53.8	5.7e-89
>prophage 164
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2334128	2337182	3485840		uncultured_virus(66.67%)	3	NA	NA
WP_174781987.1|2334128_2334929_+	metallophosphoesterase family protein	NA	K4K650	Caulobacter_phage	38.4	8.6e-45
WP_174781988.1|2335139_2336783_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	60.9	1.8e-174
WP_006578153.1|2336891_2337182_-	co-chaperone GroES	NA	A0A221S4A8	uncultured_virus	44.7	4.2e-18
>prophage 165
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2349329	2352770	3485840		Bacillus_virus(100.0%)	1	NA	NA
WP_174781994.1|2349329_2352770_+	diguanylate cyclase	NA	G3MA91	Bacillus_virus	30.5	1.2e-15
>prophage 166
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2361181	2367649	3485840		Paramecium_bursaria_Chlorella_virus(25.0%)	6	NA	NA
WP_174781997.1|2361181_2361937_+	CatB-related O-acetyltransferase	NA	M1HKK6	Paramecium_bursaria_Chlorella_virus	40.3	1.1e-20
WP_174781998.1|2362179_2362848_-	acyltransferase	NA	NA	NA	NA	NA
WP_174781999.1|2362895_2364164_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_174782000.1|2364355_2365525_-	nucleotide sugar dehydrogenase	NA	M1IB49	Acanthocystis_turfacea_Chlorella_virus	53.0	1.2e-111
WP_174782518.1|2365574_2366444_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	45.6	1.6e-65
WP_174782001.1|2366554_2367649_-	UDP-galactopyranose mutase	NA	E4ZFQ1	Streptococcus_phage	57.6	2.4e-122
>prophage 167
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2379900	2384230	3485840		Staphylococcus_phage(33.33%)	5	NA	NA
WP_174782007.1|2379900_2380563_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.7	1.4e-05
WP_174782008.1|2380559_2381354_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_174782009.1|2381350_2382349_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.5	6.7e-47
WP_053822295.1|2382848_2383157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174782010.1|2383153_2384230_-	ornithine cyclodeaminase	NA	A0A1V0SL93	Klosneuvirus	45.7	1.5e-84
>prophage 168
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2389931	2394639	3485840		Enterococcus_phage(33.33%)	6	NA	NA
WP_174782014.1|2389931_2390444_-	nucleoside 2-deoxyribosyltransferase	NA	A0A1G5S9Z4	Enterococcus_phage	36.5	5.0e-06
WP_053822301.1|2390652_2391594_+	2-hydroxyacid dehydrogenase	NA	M1HUT5	Acanthocystis_turfacea_Chlorella_virus	24.4	4.6e-13
WP_053822302.1|2391695_2392196_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_174782015.1|2392383_2393196_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_174782016.1|2393218_2393890_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_174782017.1|2393961_2394639_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	34.9	4.7e-20
>prophage 169
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2398957	2399272	3485840		Erwinia_phage(100.0%)	1	NA	NA
WP_174782522.1|2398957_2399272_+	HigA family addiction module antidote protein	NA	A0A191ZBZ4	Erwinia_phage	38.2	2.0e-05
>prophage 170
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2417387	2419562	3485840		Bacillus_thuringiensis_phage(50.0%)	2	NA	NA
WP_053822315.1|2417387_2417969_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	44.2	1.4e-44
WP_174782026.1|2418176_2419562_-	exodeoxyribonuclease VII large subunit	NA	A0A1B3AYB4	Gordonia_phage	30.3	3.9e-29
>prophage 171
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2427994	2433940	3485840		Diachasmimorpha_longicaudata_entomopoxvirus(50.0%)	4	NA	NA
WP_174782033.1|2427994_2429920_+	gamma-glutamyltransferase	NA	Q5GF27	Diachasmimorpha_longicaudata_entomopoxvirus	29.0	1.2e-12
WP_053822323.1|2430170_2431064_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_053822324.1|2431227_2432247_+	bile acid:sodium symporter	NA	NA	NA	NA	NA
WP_174782034.1|2432419_2433940_-	N-acetylmuramoyl-L-alanine amidase	NA	Q5YA51	Bacillus_phage	28.8	1.1e-11
>prophage 172
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2438853	2443673	3485840	tRNA	Moumouvirus(33.33%)	6	NA	NA
WP_174782528.1|2438853_2439312_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A2P1EL10	Moumouvirus	41.4	5.5e-12
WP_174782527.1|2439404_2440301_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	28.3	1.6e-23
WP_006579148.1|2440318_2440813_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_174782039.1|2440981_2441605_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_053822331.1|2441658_2442936_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_174782040.1|2442932_2443673_-	response regulator	NA	W8CYM9	Bacillus_phage	33.5	5.7e-27
>prophage 173
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2448705	2452047	3485840		Leptospira_phage(100.0%)	1	NA	NA
WP_174782042.1|2448705_2452047_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	22.9	4.7e-68
>prophage 174
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2464577	2468416	3485840		Pandoravirus(33.33%)	4	NA	NA
WP_053823178.1|2464577_2465555_-	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	37.9	7.3e-38
WP_174782051.1|2465616_2466861_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_151022272.1|2466969_2467467_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	41.9	3.4e-15
WP_174782052.1|2467507_2468416_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	37.8	3.0e-54
>prophage 175
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2489968	2490664	3485840		Pseudomonas_phage(100.0%)	1	NA	NA
WP_174782066.1|2489968_2490664_-	TerC family protein	NA	W8EBD0	Pseudomonas_phage	43.6	8.6e-33
>prophage 176
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2494781	2498608	3485840		Bacillus_phage(100.0%)	3	NA	NA
WP_006576703.1|2494781_2495834_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	65.0	3.8e-117
WP_053822365.1|2496238_2496931_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_053822366.1|2497036_2498608_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	28.2	5.5e-19
>prophage 177
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2504814	2509172	3485840	tRNA	Diachasmimorpha_longicaudata_entomopoxvirus(50.0%)	3	NA	NA
WP_174782071.1|2504814_2506353_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.1	9.7e-53
WP_174782072.1|2506696_2508109_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_053822372.1|2508176_2509172_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	46.0	3.3e-46
>prophage 178
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2535109	2536684	3485840		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_053822388.1|2535109_2536684_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	45.5	9.6e-64
>prophage 179
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2539744	2543657	3485840		uncultured_virus(50.0%)	4	NA	NA
WP_174782088.1|2539744_2540818_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.9	1.3e-08
WP_174782089.1|2540847_2541441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174782090.1|2541529_2542294_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_053822394.1|2542340_2543657_-	50S ribosome-binding GTPase	NA	A0A076FFS6	Aureococcus_anophage	31.7	9.2e-28
>prophage 180
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2556065	2558970	3485840		Escherichia_phage(100.0%)	3	NA	NA
WP_174782099.1|2556065_2556956_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	58.4	1.2e-82
WP_174782100.1|2557012_2558335_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	47.7	1.3e-90
WP_174782101.1|2558331_2558970_+	aldolase	NA	A0A077SK32	Escherichia_phage	45.6	1.3e-40
>prophage 181
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2562288	2563089	3485840		Autographa_californica_nuclear_polyhedrosis_virus(100.0%)	1	NA	NA
WP_174782105.1|2562288_2563089_-	APH(3'') family aminoglycoside O-phosphotransferase	NA	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	27.9	3.5e-14
>prophage 182
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2581116	2585300	3485840		Bacillus_virus(66.67%)	4	NA	NA
WP_064576496.1|2581116_2582706_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	33.9	1.1e-72
WP_082371645.1|2582822_2583533_-	histidine utilization repressor	NA	NA	NA	NA	NA
WP_174782113.1|2583708_2584488_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	41.2	2.2e-37
WP_174782536.1|2584484_2585300_-	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	29.0	1.2e-25
>prophage 183
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2591229	2592737	3485840		Planktothrix_phage(50.0%)	2	NA	NA
WP_006575654.1|2591229_2591946_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	3.4e-16
WP_006575655.1|2591960_2592737_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.5	8.7e-18
>prophage 184
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2608251	2608956	3485840		Synechococcus_phage(100.0%)	1	NA	NA
WP_174782119.1|2608251_2608956_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.0	1.3e-20
>prophage 185
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2613089	2626987	3485840	tRNA,protease	uncultured_Mediterranean_phage(25.0%)	12	NA	NA
WP_174782121.1|2613089_2616008_+|tRNA	isoleucine--tRNA ligase	tRNA	K7YVP8	Megavirus	26.1	9.1e-76
WP_053822447.1|2616007_2616532_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_053822448.1|2616625_2617825_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.2	6.6e-41
WP_053822449.1|2617929_2618430_+	dUTP diphosphatase	NA	A0A289ZTC1	Serratia_phage	51.6	9.8e-39
WP_174782122.1|2618487_2619342_-	VOC family protein	NA	NA	NA	NA	NA
WP_174782123.1|2619406_2620429_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_053822451.1|2620571_2622869_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.6	9.1e-172
WP_006578051.1|2622865_2623192_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.6	2.3e-12
WP_006578050.1|2623661_2623868_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	74.2	3.8e-21
WP_023263378.1|2624149_2625400_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	8.8e-12
WP_174782124.1|2625664_2626357_+	pseudouridine synthase	NA	NA	NA	NA	NA
WP_174782539.1|2626489_2626987_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	40.2	3.4e-15
>prophage 186
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2631763	2632687	3485840		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_053822457.1|2631763_2632687_-	ornithine carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	26.2	6.5e-20
>prophage 187
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2637441	2651560	3485840	tRNA	Wolbachia_phage(20.0%)	14	NA	NA
WP_174782128.1|2637441_2639439_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.9	2.1e-84
WP_174782129.1|2639473_2640427_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_174782130.1|2640498_2641005_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_053822463.1|2641096_2642149_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.3	5.4e-71
WP_053822464.1|2642430_2643501_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_174782131.1|2643511_2644219_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_006578919.1|2644332_2645007_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_053822466.1|2645008_2646514_+	polynucleotide adenylyltransferase PcnB	NA	H7BUW3	unidentified_phage	34.5	2.7e-23
WP_006578921.1|2646510_2647029_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_006578922.1|2646992_2647355_+	DMT family protein	NA	NA	NA	NA	NA
WP_174782132.1|2647404_2648226_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA	NA
WP_023263954.1|2648235_2648934_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_053822469.1|2648930_2649653_+	energy-coupling factor ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	2.1e-18
WP_174782133.1|2649649_2651560_-	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	NA	S4VT78	Pandoravirus	37.2	1.7e-54
>prophage 188
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2657019	2661667	3485840	transposase	Ralstonia_virus(33.33%)	3	NA	NA
WP_174779953.1|2657019_2658240_-|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	83.3	9.3e-208
WP_174782136.1|2658392_2659526_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	28.6	1.5e-23
WP_174782137.1|2659711_2661667_-	molecular chaperone DnaK	NA	A0A1V0SH73	Hokovirus	50.7	6.6e-147
>prophage 189
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2671530	2679981	3485840		Vibrio_phage(20.0%)	8	NA	NA
WP_006578594.1|2671530_2673087_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	29.4	1.5e-29
WP_174782142.1|2673167_2673662_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.9	1.4e-24
WP_174782143.1|2673752_2674451_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_174782144.1|2674528_2675368_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_174782145.1|2675479_2676337_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_006577618.1|2676510_2676996_-	DNA starvation/stationary phase protection protein	NA	A0A2H4N7L5	Lake_Baikal_phage	38.3	2.4e-21
WP_174782146.1|2677154_2678600_-	catalase	NA	A0A2K9L0T1	Tupanvirus	47.6	5.3e-101
WP_053822481.1|2679030_2679981_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.0	8.5e-07
>prophage 190
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2683855	2688610	3485840	tRNA	uncultured_Mediterranean_phage(100.0%)	4	NA	NA
WP_174782147.1|2683855_2684986_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.1	1.7e-83
WP_006577207.1|2685117_2685447_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	42.4	2.8e-10
WP_174782148.1|2685656_2687531_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_174782149.1|2687638_2688610_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	38.3	2.5e-46
>prophage 191
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2695439	2697029	3485840	transposase	Leptospira_phage(100.0%)	1	NA	NA
WP_034021473.1|2695439_2697029_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	34.0	7.1e-67
>prophage 192
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2700543	2701935	3485840		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_053822492.1|2700543_2701935_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	46.9	2.1e-107
>prophage 193
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2715544	2721263	3485840	tRNA	Streptococcus_phage(50.0%)	4	NA	NA
WP_174782157.1|2715544_2716825_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	45.6	2.5e-86
WP_053822505.1|2716943_2717999_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_006579735.1|2718069_2718576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174782158.1|2718638_2721263_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.4	7.9e-172
>prophage 194
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2738915	2746770	3485840		Salicola_phage(33.33%)	8	NA	NA
WP_008786745.1|2738915_2739674_-	glutaredoxin	NA	A0A248SKD6	Salicola_phage	41.0	2.0e-06
WP_008786744.1|2739891_2740230_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_033946779.1|2740246_2740726_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_008786742.1|2740741_2743237_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	34.6	1.5e-90
WP_008786741.1|2743475_2743832_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_021162751.1|2743870_2745181_-	MFS transporter	NA	NA	NA	NA	NA
WP_169708473.1|2745190_2745439_-	metal-sensing transcriptional repressor	NA	NA	NA	NA	NA
WP_174782160.1|2745672_2746770_+	cation diffusion facilitator family transporter	NA	A0A1V0SED0	Indivirus	25.3	4.7e-17
>prophage 195
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2755508	2756207	3485840		uncultured_virus(100.0%)	1	NA	NA
WP_008786731.1|2755508_2756207_+	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	43.6	8.9e-30
>prophage 196
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2760328	2760967	3485840		Halomonas_phage(100.0%)	1	NA	NA
WP_043549470.1|2760328_2760967_-	AAA family ATPase	NA	B0ZSI1	Halomonas_phage	40.6	1.9e-31
>prophage 197
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2769228	2770053	3485840		Cronobacter_phage(100.0%)	1	NA	NA
WP_043549481.1|2769228_2770053_-	DUF945 domain-containing protein	NA	K4F5L3	Cronobacter_phage	41.4	1.8e-42
>prophage 198
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2794768	2795266	3485840		Pseudomonas_phage(100.0%)	1	NA	NA
WP_151023457.1|2794768_2795266_+	nicotinamide-nucleotide amidohydrolase family protein	NA	B5TK85	Pseudomonas_phage	47.7	1.8e-29
>prophage 199
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2803859	2804600	3485840		Bacillus_phage(100.0%)	1	NA	NA
WP_053822521.1|2803859_2804600_-	3-oxoacyl-ACP reductase FabG	NA	W8CYX9	Bacillus_phage	39.6	1.3e-07
>prophage 200
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2818426	2822122	3485840		Burkholderia_virus(100.0%)	3	NA	NA
WP_053822535.1|2818426_2819728_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	54.2	2.5e-126
WP_174782173.1|2819734_2820979_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_174782174.1|2821192_2822122_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	47.1	3.1e-78
>prophage 201
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2828976	2836725	3485840		Acidovorax_phage(33.33%)	5	NA	NA
WP_151023214.1|2828976_2829876_+	recombination-associated protein RdgC	NA	A0A218M310	Acidovorax_phage	42.6	2.2e-57
WP_174782177.1|2829943_2830720_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_174782178.1|2830909_2832190_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_023263575.1|2832319_2833525_-	ribonucleotide-diphosphate reductase subunit beta	NA	A0A2R8FEG9	Brazilian_cedratvirus	24.7	9.4e-19
WP_174782179.1|2833785_2836725_-	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4P767	Pseudomonas_phage	43.8	1.3e-170
>prophage 202
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2840858	2843884	3485840		Klosneuvirus(33.33%)	4	NA	NA
WP_174782182.1|2840858_2841404_+	hypoxanthine-guanine phosphoribosyltransferase	NA	A0A1V0SLD7	Klosneuvirus	24.4	3.1e-06
WP_174782183.1|2841458_2842082_-	LysE family translocator	NA	NA	NA	NA	NA
WP_151023208.1|2842247_2843201_-	2OG-Fe(II) oxygenase	NA	A0A2K9L5H8	Tupanvirus	31.0	9.3e-22
WP_174782184.1|2843197_2843884_-	lytic transglycosylase domain-containing protein	NA	A0A1L7N0Z2	Ralstonia_phage	37.3	1.1e-08
>prophage 203
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2847234	2851765	3485840		Streptococcus_phage(50.0%)	5	NA	NA
WP_053822554.1|2847234_2848359_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	43.6	1.2e-63
WP_053822555.1|2848421_2849519_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_053822556.1|2849656_2849917_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_006576525.1|2849980_2850292_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_053822557.1|2850835_2851765_+	octaprenyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	25.3	9.1e-06
>prophage 204
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2857287	2857692	3485840		Rhizoctonia_fumigata_mycovirus(100.0%)	1	NA	NA
WP_053822561.1|2857287_2857692_-	NUDIX domain-containing protein	NA	A0A0B5CYJ3	Rhizoctonia_fumigata_mycovirus	40.0	1.4e-06
>prophage 205
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2864752	2865259	3485840		Pelagibacter_phage(100.0%)	1	NA	NA
WP_053822566.1|2864752_2865259_-	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	4.0e-24
>prophage 206
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2888690	2890373	3485840		Staphylococcus_phage(100.0%)	1	NA	NA
WP_053822579.1|2888690_2890373_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	27.3	1.2e-35
>prophage 207
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2895140	2896142	3485840		Planktothrix_phage(100.0%)	1	NA	NA
WP_174782199.1|2895140_2896142_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.1	6.8e-15
>prophage 208
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2909888	2911580	3485840		Staphylococcus_phage(100.0%)	1	NA	NA
WP_174782201.1|2909888_2911580_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	26.5	6.5e-26
>prophage 209
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2950370	2953625	3485840		Hokovirus(100.0%)	1	NA	NA
WP_174782218.1|2950370_2953625_+	response regulator	NA	A0A1V0SGX0	Hokovirus	37.3	4.7e-33
>prophage 210
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2957295	2959053	3485840	holin	Klosneuvirus(100.0%)	1	NA	NA
WP_174782221.1|2957295_2959053_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	29.8	2.5e-60
>prophage 211
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2962231	2963095	3485840		Pseudomonas_phage(100.0%)	1	NA	NA
WP_174782224.1|2962231_2963095_-	DUF3800 domain-containing protein	NA	A0A1W6JTE9	Pseudomonas_phage	44.8	7.8e-60
>prophage 212
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2977486	2978884	3485840		Klebsiella_phage(100.0%)	1	NA	NA
WP_174782237.1|2977486_2978884_+	DNA cytosine methyltransferase	NA	A0A0K1LQ98	Klebsiella_phage	27.3	7.3e-15
>prophage 213
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	2982322	3052084	3485840	integrase,transposase	Bacillus_phage(25.0%)	58	2980816:2980831	3050094:3050109
2980816:2980831	attL	CATCTGGCGAGCCGGA	NA	NA	NA	NA
WP_174782239.1|2982322_2984053_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_012435767.1|2984210_2985596_-	heavy metal sensor histidine kinase	NA	NA	NA	NA	NA
WP_012435768.1|2985592_2986279_-	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.8	7.2e-32
WP_162491053.1|2987020_2987311_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012435770.1|2987237_2987564_-	four-helix bundle copper-binding protein	NA	NA	NA	NA	NA
WP_103519529.1|2988189_2989359_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_167525744.1|2991036_2991168_+	YHYH domain-containing protein	NA	NA	NA	NA	NA
WP_012435773.1|2991313_2991877_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_049768032.1|2991975_2992302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008650720.1|2993151_2994759_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_008650722.1|2994755_2995139_+	GtrA family protein	NA	NA	NA	NA	NA
WP_008650723.1|2995135_2996257_+	glycosyltransferase family 2 protein	NA	U5P087	Shigella_phage	48.3	3.3e-74
WP_008650724.1|2996489_2996792_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_011514822.1|2996849_2999339_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	39.0	3.9e-112
WP_174779953.1|3000156_3001377_+|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	83.3	9.3e-208
WP_011229350.1|3001867_3002935_+	porin	NA	NA	NA	NA	NA
WP_008646716.1|3003117_3003396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011514820.1|3003694_3004096_-	copper-binding periplasmic protein CzcE	NA	NA	NA	NA	NA
WP_011229349.1|3004204_3005635_-	sensor histidine kinase CzcS	NA	W8CYF6	Bacillus_phage	21.9	1.8e-13
WP_008646724.1|3005639_3006317_-	heavy metal homeostasis two-component system response regulator CzcR	NA	W8CYM9	Bacillus_phage	33.8	4.9e-33
WP_004635344.1|3006318_3007269_-	cation transporter	NA	NA	NA	NA	NA
WP_004635342.1|3007319_3010511_-	heavy metal efflux RND transporter CzcA	NA	NA	NA	NA	NA
WP_004635340.1|3010527_3012090_-	heavy metal efflux RND transporter CzcB	NA	NA	NA	NA	NA
WP_004635338.1|3012107_3013364_-	heavy metal efflux RND transporter CzcC	NA	NA	NA	NA	NA
WP_137924345.1|3013439_3013787_-	CDF family cobalt-zinc-cadmium transporter CzcI	NA	NA	NA	NA	NA
WP_020206397.1|3014101_3014752_-	heavy metal efflux RND transporter CzcN	NA	NA	NA	NA	NA
WP_004635330.1|3015001_3015460_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	36.2	3.2e-12
WP_004635327.1|3015567_3015975_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004635326.1|3016062_3016239_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004635317.1|3017729_3018044_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_053823089.1|3018181_3020107_-	FTR1 family protein	NA	NA	NA	NA	NA
WP_115737191.1|3020524_3021097_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_115737192.1|3021143_3021623_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_115737193.1|3021667_3021880_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_174782556.1|3022115_3022283_-	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_109842673.1|3022315_3023540_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	72.5	5.1e-113
WP_082818921.1|3024286_3024700_-	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_053821795.1|3025380_3025806_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_062799357.1|3025802_3026495_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_053821794.1|3026622_3027117_-	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_170265910.1|3027106_3030142_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	43.9	4.4e-150
WP_053821792.1|3030220_3030853_-	cation transporter	NA	NA	NA	NA	NA
WP_082371464.1|3031013_3031910_+	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_053821791.1|3032309_3032663_-	copper-binding protein	NA	NA	NA	NA	NA
WP_062799358.1|3032659_3035830_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_062799361.1|3035826_3037368_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_174782240.1|3037364_3038495_-	TolC family protein	NA	NA	NA	NA	NA
WP_174782241.1|3039067_3040111_-	HNH endonuclease	NA	A0A2I2MUI7	uncultured_Caudovirales_phage	34.9	1.4e-31
WP_174782242.1|3040113_3040503_-	HIT family protein	NA	D7NW73	Streptomyces_phage	40.8	2.0e-15
WP_174782243.1|3041453_3042218_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_174782244.1|3042214_3043588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174782245.1|3043584_3044061_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174782246.1|3044467_3046438_-	NTPase KAP	NA	NA	NA	NA	NA
WP_174782247.1|3046832_3047126_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_174782248.1|3047122_3048004_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	39.0	5.4e-48
WP_174782249.1|3048789_3049047_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174782250.1|3049289_3050060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174782251.1|3050056_3052084_+|transposase	transposase	transposase	NA	NA	NA	NA
3050094:3050109	attR	CATCTGGCGAGCCGGA	NA	NA	NA	NA
>prophage 214
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3063951	3069256	3485840		Staphylococcus_phage(33.33%)	4	NA	NA
WP_012248118.1|3063951_3065505_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	28.3	4.4e-29
WP_105793864.1|3065595_3066357_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_012248120.1|3066491_3067292_+	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	29.5	1.3e-16
WP_105793862.1|3067288_3069256_+	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	20.6	6.8e-27
>prophage 215
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3072587	3073376	3485840		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_041862736.1|3072587_3073376_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.9	7.7e-14
>prophage 216
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3083137	3085519	3485840		uncultured_virus(100.0%)	1	NA	NA
WP_174782558.1|3083137_3085519_+	cadmium-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	36.7	5.5e-87
>prophage 217
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3094042	3095728	3485840		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_062799379.1|3094042_3095728_-	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.4	1.7e-34
>prophage 218
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3113122	3115200	3485840		Hokovirus(50.0%)	2	NA	NA
WP_151023058.1|3113122_3114517_-	heavy metal sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	27.7	5.6e-07
WP_053821777.1|3114513_3115200_-	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.4	4.6e-31
>prophage 219
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3123368	3125810	3485840		uncultured_virus(100.0%)	1	NA	NA
WP_174782259.1|3123368_3125810_-	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	36.4	8.6e-88
>prophage 220
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3143281	3144871	3485840	transposase	Leptospira_phage(100.0%)	1	NA	NA
WP_034021473.1|3143281_3144871_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	34.0	7.1e-67
>prophage 221
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3149564	3150977	3485840		Salmonella_phage(100.0%)	2	NA	NA
WP_053821760.1|3149564_3150323_-	DUF4158 domain-containing protein	NA	A0A1B0V7H9	Salmonella_phage	65.7	9.5e-86
WP_075791073.1|3150413_3150977_-	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	83.6	1.7e-47
>prophage 222
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3155696	3156386	3485840		Sinorhizobium_phage(100.0%)	1	NA	NA
WP_174782263.1|3155696_3156386_-	hypothetical protein	NA	A0A291AUV6	Sinorhizobium_phage	36.6	2.3e-22
>prophage 223
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3177494	3182714	3485840		Streptococcus_phage(25.0%)	7	NA	NA
WP_053822792.1|3177494_3178394_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	40.1	1.0e-33
WP_174782561.1|3178620_3179391_-	septal ring lytic transglycosylase RlpA family protein	NA	H2BCY4	Synechococcus_phage	51.1	2.1e-16
WP_174782271.1|3179762_3180413_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_174782272.1|3180429_3181188_+	exonuclease	NA	A0A2L0UZL4	Agrobacterium_phage	38.2	1.3e-31
WP_053823239.1|3181368_3181587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_053822796.1|3181659_3182019_-	arsenate reductase (glutaredoxin)	NA	NA	NA	NA	NA
WP_174782273.1|3182129_3182714_+	N-acetyltransferase family protein	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.2	7.7e-19
>prophage 224
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3190643	3192434	3485840		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_151022897.1|3190643_3192434_+	glyoxylate carboligase	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	25.7	2.9e-40
>prophage 225
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3210961	3220258	3485840		Bacillus_phage(66.67%)	6	NA	NA
WP_174782564.1|3210961_3212023_-	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	23.5	3.5e-09
WP_174782291.1|3212051_3212813_-	response regulator	NA	NA	NA	NA	NA
WP_174782292.1|3212953_3215038_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.0e-101
WP_151022886.1|3215650_3216778_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_006576219.1|3216885_3217266_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_174782293.1|3217339_3220258_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.5	6.4e-263
>prophage 226
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3248263	3249983	3485840		Bifidobacterium_phage(50.0%)	2	NA	NA
WP_053822842.1|3248263_3249166_-	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	35.3	2.8e-15
WP_006579397.1|3249200_3249983_-	ParA family protein	NA	Q8JL10	Natrialba_phage	34.5	5.9e-22
>prophage 227
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3255057	3258727	3485840		Burkholderia_virus(33.33%)	3	NA	NA
WP_174782307.1|3255057_3256002_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	26.3	7.8e-21
WP_053822846.1|3256144_3256888_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	25.6	2.9e-10
WP_082371659.1|3256915_3258727_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	30.0	1.5e-15
>prophage 228
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3267403	3274291	3485840		Staphylococcus_phage(33.33%)	5	NA	NA
WP_053822852.1|3267403_3268180_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.3	1.3e-13
WP_174782310.1|3268582_3270202_-	GMC family oxidoreductase N-terminal domain-containing protein	NA	A0A1V0S9M4	Catovirus	30.6	1.4e-57
WP_174782311.1|3270363_3271254_-	lysophospholipase	NA	NA	NA	NA	NA
WP_082371578.1|3271307_3271766_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_174782312.1|3271786_3274291_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	37.1	3.1e-101
>prophage 229
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3292879	3293158	3485840		Bacillus_phage(100.0%)	1	NA	NA
WP_006579334.1|3292879_3293158_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	44.4	9.7e-12
>prophage 230
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3315408	3321737	3485840	integrase	Streptococcus_phage(33.33%)	6	3301675:3301689	3329262:3329276
3301675:3301689	attL	GCCGCGCGTGGTGGC	NA	NA	NA	NA
WP_009238667.1|3315408_3316419_-	2-hydroxyacid dehydrogenase	NA	M1NSB9	Streptococcus_phage	27.8	1.3e-16
WP_009238668.1|3316443_3317241_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_046983516.1|3317253_3318114_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020200553.1|3318116_3318935_-	phosphonate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.2	5.4e-26
WP_123876282.1|3320529_3320841_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104566654.1|3320837_3321737_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	B7SYF8	Stenotrophomonas_phage	39.6	7.6e-50
3329262:3329276	attR	GCCACCACGCGCGGC	NA	NA	NA	NA
>prophage 231
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3325662	3327222	3485840		Deep-sea_thermophilic_phage(100.0%)	1	NA	NA
WP_053822726.1|3325662_3327222_+	recombinase family protein	NA	E5DV73	Deep-sea_thermophilic_phage	28.0	4.2e-11
>prophage 232
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3342386	3380437	3485840	terminase,portal,head,capsid	Acidithiobacillus_phage(47.22%)	47	NA	NA
WP_053822738.1|3342386_3342851_-	lysozyme	NA	K4I410	Acidithiobacillus_phage	80.7	2.9e-69
WP_053822739.1|3342847_3343324_-	hypothetical protein	NA	K4ICR8	Acidithiobacillus_phage	90.5	1.7e-77
WP_060784892.1|3343320_3343623_-	hypothetical protein	NA	K4I011	Acidithiobacillus_phage	65.3	6.8e-27
WP_060784893.1|3343686_3344040_-	DUF2793 domain-containing protein	NA	A0A2H4GY35	Pseudomonas_phage	59.8	2.5e-33
WP_060784894.1|3344069_3346289_-	hypothetical protein	NA	A0A125SA60	Pseudomonas_phage	45.5	5.5e-174
WP_053822741.1|3346285_3346498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053822742.1|3346494_3346725_-	hypothetical protein	NA	A0A0S0N2N8	Pseudomonas_phage	50.7	5.5e-13
WP_053822743.1|3346734_3347538_-	phage BR0599 family protein	NA	A0A2D2W238	Stenotrophomonas_phage	41.9	1.7e-56
WP_141192903.1|3347534_3349217_-	hypothetical protein	NA	A0A076FRD9	Pseudomonas_phage	31.7	8.4e-66
WP_060784896.1|3349217_3350360_-	hypothetical protein	NA	A0A0S0NA39	Pseudomonas_phage	28.5	1.8e-19
WP_053822747.1|3350367_3351339_-	hypothetical protein	NA	W8VMF4	Pseudomonas_phage	29.8	7.0e-25
WP_053822748.1|3351341_3354539_-	tape measure protein	NA	A0A125RNI9	Pseudomonas_phage	23.6	4.5e-36
WP_053822749.1|3354542_3355190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060784897.1|3355379_3355769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060784898.1|3355779_3356532_-	hypothetical protein	NA	A0A2D2W2E0	Stenotrophomonas_phage	50.0	6.0e-56
WP_053822751.1|3356534_3356714_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053822752.1|3356720_3357146_-	hypothetical protein	NA	D6PGA7	uncultured_phage	35.5	5.1e-12
WP_174782328.1|3357157_3357442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053822753.1|3357441_3358443_-|capsid	major capsid protein	capsid	Q9JMM2	Wolbachia_phage	65.9	1.3e-122
WP_053822754.1|3358445_3358823_-|head	head decoration protein	head	A0A1B2LRT0	Wolbachia_phage	50.4	2.2e-27
WP_053822755.1|3358824_3360132_-	S49 family peptidase	NA	K4HZZ6	Acidithiobacillus_phage	51.8	3.8e-66
WP_053822756.1|3360154_3361681_-|portal	phage portal protein	portal	A0A1B2LRR5	Wolbachia_phage	56.6	8.2e-153
WP_053822757.1|3361682_3361889_-	hypothetical protein	NA	A0A2H4JCJ9	uncultured_Caudovirales_phage	100.0	1.4e-28
WP_053822758.1|3361899_3363870_-|terminase	phage terminase large subunit family protein	terminase	A0A2H4JIC6	uncultured_Caudovirales_phage	100.0	0.0e+00
WP_053822759.1|3363880_3364408_-	hypothetical protein	NA	A0A2H4JCL4	uncultured_Caudovirales_phage	100.0	2.3e-91
WP_053822760.1|3364526_3365039_+	DUF3489 domain-containing protein	NA	A0A2H4JE21	uncultured_Caudovirales_phage	100.0	1.5e-50
WP_053822761.1|3365136_3365502_+	hypothetical protein	NA	A0A2H4JI44	uncultured_Caudovirales_phage	100.0	5.6e-68
WP_053822762.1|3365465_3366734_-	site-specific DNA-methyltransferase	NA	A0A2H4JGF1	uncultured_Caudovirales_phage	100.0	4.3e-248
WP_053822763.1|3366730_3368152_-	site-specific DNA-methyltransferase	NA	K4I3Y2	Acidithiobacillus_phage	60.8	3.3e-164
WP_053822764.1|3368482_3368869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053822765.1|3368861_3369071_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087782353.1|3369072_3369549_-	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	72.5	1.8e-58
WP_053822766.1|3369691_3371974_-	hypothetical protein	NA	K4HZY1	Acidithiobacillus_phage	74.3	0.0e+00
WP_053823234.1|3371957_3372212_-	helix-turn-helix domain-containing protein	NA	K4I1D6	Acidithiobacillus_phage	41.1	2.7e-08
WP_087782354.1|3372208_3372955_-	hypothetical protein	NA	K4HZA0	Acidithiobacillus_phage	96.0	1.5e-136
WP_053822767.1|3372951_3373473_-	hypothetical protein	NA	K4I3X7	Acidithiobacillus_phage	97.7	4.8e-97
WP_053822768.1|3373536_3374166_-	hypothetical protein	NA	K4ICM8	Acidithiobacillus_phage	92.5	2.0e-97
WP_053822769.1|3374169_3375000_-	ATP-binding protein	NA	K4HZX9	Acidithiobacillus_phage	98.2	7.3e-156
WP_053822770.1|3374999_3375773_-	antirepressor	NA	K4I1D2	Acidithiobacillus_phage	98.1	2.4e-140
WP_053822771.1|3375776_3376256_-	hypothetical protein	NA	K4HZ96	Acidithiobacillus_phage	98.7	4.5e-81
WP_053822772.1|3376267_3376531_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_053822773.1|3376713_3377127_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_053822774.1|3377168_3377543_+	mercuric ion transporter MerT	NA	NA	NA	NA	NA
WP_053822775.1|3377554_3377848_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA	NA
WP_053822776.1|3378075_3378540_-	hypothetical protein	NA	K4HZX2	Acidithiobacillus_phage	39.7	3.4e-17
WP_053822777.1|3378536_3379934_-	recombinase family protein	NA	K4ICM1	Acidithiobacillus_phage	60.4	9.5e-140
WP_053822778.1|3379963_3380437_-	DUF2924 domain-containing protein	NA	K4I3X1	Acidithiobacillus_phage	57.2	4.6e-38
>prophage 233
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3392461	3399450	3485840	tRNA	Prochlorococcus_phage(33.33%)	6	NA	NA
WP_174782333.1|3392461_3393466_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	31.7	7.3e-09
WP_006579764.1|3393618_3394125_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.3	3.9e-19
WP_174782334.1|3394207_3394783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174782335.1|3394841_3396038_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_053823256.1|3396149_3396575_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_174782336.1|3396777_3399450_+	DNA topoisomerase III	NA	R4TFQ7	Phaeocystis_globosa_virus	22.9	1.6e-15
>prophage 234
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3411902	3412913	3485840		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_174782345.1|3411902_3412913_+	D-2-hydroxyacid dehydrogenase family protein	NA	M1HBE3	Paramecium_bursaria_Chlorella_virus	24.1	3.2e-12
>prophage 235
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3439536	3440271	3485840		Burkholderia_virus(100.0%)	1	NA	NA
WP_174782358.1|3439536_3440271_+	NYN domain-containing protein	NA	A4JWQ6	Burkholderia_virus	76.0	1.7e-103
>prophage 236
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3466959	3471961	3485840		Aureococcus_anophage(50.0%)	4	NA	NA
WP_174782369.1|3466959_3467940_-	Rieske (2Fe-2S) protein	NA	A0A076FFT9	Aureococcus_anophage	42.9	5.7e-06
WP_151023157.1|3468029_3468671_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_174782370.1|3468667_3470347_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_174782371.1|3470452_3471961_+	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	26.1	1.9e-32
>prophage 237
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3476412	3477786	3485840		Ralstonia_phage(100.0%)	1	NA	NA
WP_174782377.1|3476412_3477786_+	saccharopine dehydrogenase NADP-binding domain-containing protein	NA	B2ZXX8	Ralstonia_phage	37.8	5.8e-73
>prophage 238
NZ_CP054626	Cupriavidus gilardii strain FDAARGOS_639 chromosome 2, complete sequence	3485840	3482708	3485234	3485840		Bacillus_virus(100.0%)	1	NA	NA
WP_174782382.1|3482708_3485234_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	56.7	1.8e-11
