assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013344645.1_ASM1334464v1	NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	1	1608874-1609305	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no		cas14j,cas3,DinG,DEDDh,csa3,WYL	Orphan	GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC,AAACAACATGACTCTAAAAC,GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC	36,20,36	0	0	NA	NA	II-A,II-B:NA:II-A,II-B	6,6,4	6	Orphan	cas14j,cas3,DinG,DEDDh,csa3,WYL	NA,NA	NA|250aa|up_9|NZ_CP046112.1_1594783_1595533_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|234aa|up_8|NZ_CP046112.1_1595650_1596352_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|808aa|up_7|NZ_CP046112.1_1596473_1598897_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|404aa|up_6|NZ_CP046112.1_1599210_1600422_-	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|302aa|up_5|NZ_CP046112.1_1600450_1601356_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|327aa|up_4|NZ_CP046112.1_1601477_1602458_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|589aa|up_3|NZ_CP046112.1_1602537_1604304_-	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|578aa|up_2|NZ_CP046112.1_1604300_1606034_-	TIGR02857, transport_ATP-binding_protein, thiol reductant ABC exporter, CydD subunit	NA|338aa|up_1|NZ_CP046112.1_1606038_1607052_-	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|473aa|up_0|NZ_CP046112.1_1607048_1608467_-	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|288aa|down_0|NZ_CP046112.1_1609462_1610326_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|750aa|down_1|NZ_CP046112.1_1610410_1612660_-	PRK07726, PRK07726, DNA topoisomerase 3	NA|122aa|down_2|NZ_CP046112.1_1612622_1612988_-	pfam06279, DUF1033, Protein of unknown function (DUF1033)	NA|190aa|down_3|NZ_CP046112.1_1613084_1613654_-	pfam13305, WHG, WHG domain	NA|172aa|down_4|NZ_CP046112.1_1613786_1614302_+	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|413aa|down_5|NZ_CP046112.1_1614318_1615557_+	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|375aa|down_6|NZ_CP046112.1_1615736_1616861_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|115aa|down_7|NZ_CP046112.1_1617086_1617431_-	pfam08866, DUF1831, Putative amino acid metabolism	NA|382aa|down_8|NZ_CP046112.1_1617498_1618644_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|325aa|down_9|NZ_CP046112.1_1618800_1619775_-	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional
GCF_013344645.1_ASM1334464v1	NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2	1789128-1789214	2	CRISPRCasFinder	no		cas14j,cas3,DinG,DEDDh,csa3,WYL	Orphan	ATGAATCAATTCTTTCATCTATCGTCT	27	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,DinG,DEDDh,csa3,WYL	NA|46aa|up_9|NZ_CP046112.1_1776467_1776605_+,NA|184aa|up_3|NZ_CP046112.1_1782829_1783381_+,NA|46aa|down_0|NZ_CP046112.1_1789699_1789837_-,NA|109aa|down_1|NZ_CP046112.1_1790323_1790650_-	NA|46aa|up_9|NZ_CP046112.1_1776467_1776605_+	NA	NA|499aa|up_8|NZ_CP046112.1_1777013_1778510_+	cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B	NA|83aa|up_7|NZ_CP046112.1_1778567_1778816_+	pfam05402, PqqD, Coenzyme PQQ synthesis protein D (PqqD)	NA|764aa|up_6|NZ_CP046112.1_1778815_1781107_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|236aa|up_5|NZ_CP046112.1_1781158_1781866_+	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|262aa|up_4|NZ_CP046112.1_1781868_1782654_+	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein	NA|184aa|up_3|NZ_CP046112.1_1782829_1783381_+	NA	NA|144aa|up_2|NZ_CP046112.1_1784935_1785367_+	cd00221, Vsr, Very Short Patch Repair (Vsr) Endonuclease	NA|493aa|up_1|NZ_CP046112.1_1785380_1786859_-	cd00583, MutH_Sau3AI, MutH is a 28kD endonuclease involved in methyl-directed DNA mismatch repair in gram negative bacteria	NA|430aa|up_0|NZ_CP046112.1_1787069_1788359_+	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm)	NA|46aa|down_0|NZ_CP046112.1_1789699_1789837_-	NA	NA|109aa|down_1|NZ_CP046112.1_1790323_1790650_-	NA	NA|121aa|down_2|NZ_CP046112.1_1790695_1791058_-	pfam13240, zinc_ribbon_2, zinc-ribbon domain	NA|72aa|down_3|NZ_CP046112.1_1791094_1791310_-	pfam01381, HTH_3, Helix-turn-helix	NA|112aa|down_4|NZ_CP046112.1_1791438_1791774_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|666aa|down_5|NZ_CP046112.1_1791849_1793847_-	pfam01807, zf-CHC2, CHC2 zinc finger	NA|92aa|down_6|NZ_CP046112.1_1793944_1794220_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|245aa|down_7|NZ_CP046112.1_1794452_1795187_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|381aa|down_8|NZ_CP046112.1_1795225_1796368_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|465aa|down_9|NZ_CP046112.1_1796463_1797858_-	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB
GCF_013344645.1_ASM1334464v1	NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	3	2466571-2466644	3	CRISPRCasFinder	no		cas14j,cas3,DinG,DEDDh,csa3,WYL	Orphan	ATAGTTGGCGAGCAACAGAAAAAC	24	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,DinG,DEDDh,csa3,WYL	NA|121aa|up_9|NZ_CP046112.1_2455560_2455923_-,NA|85aa|up_8|NZ_CP046112.1_2455932_2456187_-,NA	NA|121aa|up_9|NZ_CP046112.1_2455560_2455923_-	NA	NA|85aa|up_8|NZ_CP046112.1_2455932_2456187_-	NA	NA|289aa|up_7|NZ_CP046112.1_2456490_2457357_-	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown]	NA|435aa|up_6|NZ_CP046112.1_2457524_2458829_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|423aa|up_5|NZ_CP046112.1_2458821_2460090_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|150aa|up_4|NZ_CP046112.1_2460298_2460748_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|235aa|up_3|NZ_CP046112.1_2460793_2461498_-	pfam13731, WxL, WxL domain surface cell wall-binding	NA|238aa|up_2|NZ_CP046112.1_2461911_2462625_-	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|915aa|up_1|NZ_CP046112.1_2462886_2465631_+	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	NA|217aa|up_0|NZ_CP046112.1_2465645_2466296_+	TIGR01990, bPGM, beta-phosphoglucomutase	NA|48aa|down_0|NZ_CP046112.1_2467545_2467689_-	pfam16935, Hol_Tox, Putative Holin-like Toxin (Hol-Tox)	NA|324aa|down_1|NZ_CP046112.1_2468685_2469657_-	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|146aa|down_2|NZ_CP046112.1_2469831_2470269_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|185aa|down_3|NZ_CP046112.1_2470401_2470956_-	cd00555, Maf, Nucleotide binding protein Maf	NA|711aa|down_4|NZ_CP046112.1_2470980_2473113_-	COG0323, MutL, DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair]	NA|859aa|down_5|NZ_CP046112.1_2473144_2475721_-	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|124aa|down_6|NZ_CP046112.1_2475721_2476093_-	COG4550, COG4550, Predicted membrane protein [Function unknown]	NA|266aa|down_7|NZ_CP046112.1_2476180_2476978_-	pfam13277, YmdB, YmdB-like protein	NA|519aa|down_8|NZ_CP046112.1_2477137_2478694_-	PRK12704, PRK12704, phosphodiesterase; Provisional	NA|349aa|down_9|NZ_CP046112.1_2479090_2480137_-	PRK09354, recA, recombinase A; Provisional
