The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	0	10115	2937521		Staphylococcus_phage(50.0%)	11	NA	NA
WP_002361147.1|1109_1730_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_002355221.1|1751_2726_-	ring-cleaving dioxygenase	NA	NA	NA	NA	NA
WP_002362950.1|3008_3344_+	multidrug resistance protein SMR	NA	NA	NA	NA	NA
WP_002355223.1|3340_3652_+	multidrug efflux SMR transporter	NA	NA	NA	NA	NA
WP_002362952.1|3747_4794_-	chitinase	NA	NA	NA	NA	NA
WP_002403699.1|4836_5421_-	lytic polysaccharide monooxygenase	NA	NA	NA	NA	NA
WP_002362954.1|5695_6430_+	acyl-ACP thioesterase	NA	NA	NA	NA	NA
WP_002362955.1|6480_7314_+	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_002362956.1|7330_7867_+	haloacid dehalogenase	NA	A0A0N9SIY2	Staphylococcus_phage	41.2	7.8e-26
WP_002362957.1|7889_9242_-	aspartate kinase	NA	NA	NA	NA	NA
WP_002355232.1|9428_10115_+	HAD family phosphatase	NA	A0A1D8KNV9	Synechococcus_phage	26.8	4.1e-11
>prophage 2
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	13361	15394	2937521		Bacillus_phage(100.0%)	2	NA	NA
WP_002355236.1|13361_14054_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.4	5.3e-35
WP_002403698.1|14050_15394_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	35.0	3.7e-32
>prophage 3
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	21457	21877	2937521		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002355245.1|21457_21877_-	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A0N9SKD8	Staphylococcus_phage	41.9	5.4e-14
>prophage 4
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	40915	42043	2937521		uncultured_virus(100.0%)	1	NA	NA
WP_002362969.1|40915_42043_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	A0A218MNE0	uncultured_virus	45.2	7.0e-85
>prophage 5
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	57473	60159	2937521	transposase	Micromonas_sp._RCC1109_virus(50.0%)	2	NA	NA
WP_002355280.1|57473_58628_+	mannitol-1-phosphate 5-dehydrogenase	NA	E5EQS6	Micromonas_sp._RCC1109_virus	29.8	1.2e-15
WP_108119837.1|58756_60159_-|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	42.8	5.4e-34
>prophage 6
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	63551	64262	2937521		Planktothrix_phage(100.0%)	1	NA	NA
WP_002403815.1|63551_64262_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	6.1e-34
>prophage 7
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	85746	91538	2937521		Acinetobacter_phage(33.33%)	5	NA	NA
WP_002355315.1|85746_87228_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	38.2	2.2e-86
WP_002355317.1|88046_88646_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0E3XCL7	Enterococcus_phage	55.0	3.8e-37
WP_002355318.1|88715_89096_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_002355319.1|89260_90076_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_002363006.1|90080_91538_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	32.7	1.5e-66
>prophage 8
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	107051	107660	2937521		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_002361201.1|107051_107660_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	57.1	5.1e-66
>prophage 9
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	111072	117782	2937521		Enterococcus_phage(40.0%)	7	NA	NA
WP_002355354.1|111072_111774_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	40.8	1.9e-16
WP_002386098.1|111932_112502_+	LemA family protein	NA	NA	NA	NA	NA
WP_002381196.1|112546_113833_+	TPM domain-containing protein	NA	NA	NA	NA	NA
WP_002355357.1|113872_114838_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	71.3	2.1e-130
WP_002355358.1|115038_117198_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	63.3	5.9e-266
WP_002355359.1|117178_117556_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	37.8	1.2e-12
WP_002355360.1|117557_117782_-	redoxin NrdH	NA	A0A0M7REK7	Lactobacillus_phage	49.3	6.4e-14
>prophage 10
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	121336	173252	2937521	transposase,integrase	Bacillus_phage(22.22%)	40	125531:125556	175188:175213
WP_002355365.1|121336_122506_-|integrase	site-specific integrase	integrase	A0A1B0T6A8	Bacillus_phage	28.9	3.6e-31
WP_002355366.1|122549_122780_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
125531:125556	attL	ATTTACACAAAATTATTGACGCTCCC	NA	NA	NA	NA
WP_002355369.1|125808_126846_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002335374.1|126871_127810_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_174776087.1|128334_128934_+|integrase	tyrosine-type recombinase/integrase	integrase	D2XR58	Bacillus_phage	35.6	3.2e-28
WP_002386101.1|130717_131905_+	nucleotide sugar dehydrogenase	NA	M1HV26	Paramecium_bursaria_Chlorella_virus	48.6	4.2e-96
WP_002355375.1|131941_133135_+	glycosyltransferase	NA	M1H5V3	Paramecium_bursaria_Chlorella_virus	32.4	1.1e-43
WP_010784141.1|133292_134252_+|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
WP_002380049.1|135137_136019_+	peptidase S41	NA	NA	NA	NA	NA
WP_002384831.1|136189_136855_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA	NA
WP_002358517.1|136871_137063_+	DUF2273 domain-containing protein	NA	NA	NA	NA	NA
WP_002358518.1|137091_137628_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_002392382.1|142732_143941_+	YSIRK-targeted surface antigen transcriptional regulator	NA	NA	NA	NA	NA
WP_142665927.1|144070_144487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002384835.1|144711_145449_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171804887.1|145494_145977_-	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	37.2	3.7e-11
WP_002392383.1|146135_146396_+	recombinase family protein	NA	NA	NA	NA	NA
WP_100815088.1|146408_146615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002363071.1|146694_147513_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002363072.1|147668_148376_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
WP_002363073.1|148368_149871_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_002358535.1|149881_150364_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002358536.1|150996_151761_-	YibE/F family protein	NA	NA	NA	NA	NA
WP_002358539.1|153149_153323_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_002382844.1|153344_153722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002363076.1|153773_154178_+	NusG domain II-containing protein	NA	NA	NA	NA	NA
WP_002363077.1|154371_155442_+	ammonium transporter	NA	NA	NA	NA	NA
WP_002363078.1|155544_156678_+	NAD(P)-binding domain-containing protein	NA	V9VEY6	Lactococcus_phage	26.7	2.2e-06
WP_002370911.1|157746_158058_-|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	65.6	1.6e-23
WP_002367939.1|158163_158439_-|transposase	transposase	transposase	A0A0N9S8A3	Staphylococcus_phage	40.9	1.1e-10
WP_002358549.1|158947_160114_-	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_002384845.1|160470_162546_+	family 31 glucosidase	NA	NA	NA	NA	NA
WP_002358551.1|162545_163331_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002358552.1|163323_164136_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002363085.1|164160_164643_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002358554.1|164654_165062_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002364888.1|165166_166474_+	xylose isomerase	NA	NA	NA	NA	NA
WP_002363087.1|166535_168026_+	xylulokinase	NA	NA	NA	NA	NA
WP_010706719.1|169030_169990_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002364887.1|170219_173252_+	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	23.2	2.6e-17
175188:175213	attR	ATTTACACAAAATTATTGACGCTCCC	NA	NA	NA	NA
>prophage 11
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	180367	181513	2937521		Oenococcus_phage(100.0%)	1	NA	NA
WP_002331205.1|180367_181513_+	galactonate dehydratase	NA	Q6A202	Oenococcus_phage	33.4	1.2e-52
>prophage 12
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	197047	197767	2937521		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_002363088.1|197047_197767_+	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	32.7	1.2e-18
>prophage 13
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	201528	207121	2937521		Bacillus_phage(66.67%)	4	NA	NA
WP_010706716.1|201528_202944_+	energy-coupling factor ABC transporter ATP-binding protein	NA	A0A1V0SGN0	Hokovirus	26.4	4.5e-20
WP_002363093.1|202961_203531_+	MptD family putative ECF transporter S component	NA	NA	NA	NA	NA
WP_002363094.1|203640_205395_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.1	4.4e-25
WP_002392324.1|205354_207121_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.4	5.0e-29
>prophage 14
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	221593	226502	2937521	tRNA	Staphylococcus_phage(50.0%)	4	NA	NA
WP_010784562.1|221593_222433_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	48.2	2.6e-68
WP_002355441.1|222455_222938_+	VOC family protein	NA	NA	NA	NA	NA
WP_002361214.1|223103_224549_+	cardiolipin synthase	NA	NA	NA	NA	NA
WP_002355444.1|225245_226502_+|tRNA	tyrosine--tRNA ligase	tRNA	A0A1L2CUL7	Pectobacterium_phage	40.3	1.7e-79
>prophage 15
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	233728	234235	2937521		Bacillus_virus(100.0%)	1	NA	NA
WP_174776086.1|233728_234235_-	phosphatidylglycerophosphatase A	NA	G3MBC5	Bacillus_virus	55.1	2.8e-41
>prophage 16
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	238280	239240	2937521		Catovirus(100.0%)	1	NA	NA
WP_174776084.1|238280_239240_+	GDP-mannose 4,6-dehydratase	NA	A0A1V0SAI6	Catovirus	32.9	1.3e-39
>prophage 17
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	264522	265476	2937521		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_002380081.1|264522_265476_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	30.1	4.6e-13
>prophage 18
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	273289	273631	2937521		Streptococcus_phage(100.0%)	1	NA	NA
WP_002355518.1|273289_273631_+	YlbF family regulator	NA	A0A1X9I5Y8	Streptococcus_phage	34.9	2.5e-09
>prophage 19
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	281954	282692	2937521		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002363160.1|281954_282692_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	2.0e-27
>prophage 20
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	294583	296158	2937521		Streptococcus_phage(100.0%)	1	NA	NA
WP_002355543.1|294583_296158_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	26.1	2.7e-34
>prophage 21
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	307542	312441	2937521	protease	Agrobacterium_phage(50.0%)	4	NA	NA
WP_002384925.1|307542_309783_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	39.9	8.7e-127
WP_002366170.1|310085_310277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002355551.1|310447_310714_+	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_002361251.1|310713_312441_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	33.9	8.7e-18
>prophage 22
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	324609	329024	2937521		Bacillus_phage(50.0%)	2	NA	NA
WP_002363179.1|324609_326868_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	39.7	2.1e-125
WP_002384934.1|326993_329024_+	NAD-dependent DNA ligase LigA	NA	A0A0A8J9A9	Ralstonia_phage	35.7	3.7e-108
>prophage 23
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	332828	340915	2937521		Catovirus(25.0%)	7	NA	NA
WP_002403511.1|332828_333917_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.6	5.1e-16
WP_002355574.1|334116_335490_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	51.1	5.8e-134
WP_002355583.1|335758_336076_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_143348081.1|336118_336352_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002355587.1|337362_338382_+	putrescine carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	27.8	1.2e-14
WP_002355588.1|338448_339825_+	APC family permease	NA	NA	NA	NA	NA
WP_002364800.1|339817_340915_+	agmatine deiminase	NA	M1HPC5	Acanthocystis_turfacea_Chlorella_virus	47.9	1.3e-96
>prophage 24
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	344193	345545	2937521		Yersinia_phage(50.0%)	2	NA	NA
WP_002384942.1|344193_344892_+	nicotinamide riboside transporter PnuC	NA	I7KQU6	Yersinia_phage	31.8	1.5e-21
WP_002355594.1|344900_345545_+	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	48.2	9.0e-53
>prophage 25
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	361325	364770	2937521		Streptococcus_phage(50.0%)	2	NA	NA
WP_142426595.1|361325_363230_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	33.6	2.2e-91
WP_002355616.1|364032_364770_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	44.2	1.1e-35
>prophage 26
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	369333	378563	2937521		Streptococcus_phage(40.0%)	8	NA	NA
WP_002403929.1|369333_372153_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	55.6	2.9e-305
WP_002366200.1|372324_373119_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002355625.1|373284_374172_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	32.2	5.3e-11
WP_002355627.1|374171_375167_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	64.2	1.9e-118
WP_002358736.1|375200_376136_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	37.8	2.1e-50
WP_002358737.1|376369_377293_+	PEP phosphonomutase	NA	NA	NA	NA	NA
WP_002392072.1|377406_377925_+	DsbA family protein	NA	NA	NA	NA	NA
WP_002355633.1|377969_378563_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	54.7	4.4e-54
>prophage 27
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	384184	392392	2937521		Paramecium_bursaria_Chlorella_virus(25.0%)	6	NA	NA
WP_002388512.1|384184_385972_+	glycerophosphoryl diester phosphodiesterase membrane domain-containing protein	NA	M1HWP4	Paramecium_bursaria_Chlorella_virus	25.3	3.8e-08
WP_002384969.1|385997_386405_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_002355647.1|386638_386839_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	81.8	2.1e-24
WP_002384972.1|387582_388914_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_002388511.1|389114_390992_+	acetyltransferase	NA	W6MVL2	Pseudomonas_phage	31.4	4.2e-34
WP_002376004.1|391207_392392_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	71.2	1.7e-150
>prophage 28
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	397562	402859	2937521		Bacillus_phage(33.33%)	5	NA	NA
WP_002358756.1|397562_399332_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.6	4.2e-52
WP_002384980.1|399742_400348_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002355665.1|400485_401565_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_002363221.1|401569_402238_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.1	1.9e-29
WP_002384982.1|402295_402859_-	rRNA methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	45.5	4.3e-35
>prophage 29
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	406663	414169	2937521	tRNA	Enterococcus_phage(33.33%)	6	NA	NA
WP_002378053.1|406663_408877_+	autolysin	NA	A0A249Y0X5	Enterococcus_phage	32.5	3.4e-14
WP_002388508.1|409280_411695_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	72.7	0.0e+00
WP_002383054.1|411749_411974_-	DUF3955 domain-containing protein	NA	NA	NA	NA	NA
WP_002355676.1|412070_412514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002384986.1|412689_413523_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002355681.1|413533_414169_-	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.1	2.1e-30
>prophage 30
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	420717	421977	2937521		Lactobacillus_phage(50.0%)	2	NA	NA
WP_002355701.1|420717_421173_-	GNAT family N-acetyltransferase	NA	E9LUK4	Lactobacillus_phage	54.7	7.5e-38
WP_002355702.1|421347_421977_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.6	2.4e-34
>prophage 31
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	439778	441326	2937521		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_002355724.1|439778_441326_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	37.0	5.2e-62
>prophage 32
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	444539	444917	2937521		Lactobacillus_phage(100.0%)	1	NA	NA
WP_002355729.1|444539_444917_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A291I9M9	Lactobacillus_phage	36.9	6.7e-08
>prophage 33
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	460266	461460	2937521	holin	Planktothrix_phage(100.0%)	1	NA	NA
WP_002355745.1|460266_461460_-|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	G9BWD6	Planktothrix_phage	32.2	4.4e-21
>prophage 34
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	465645	484655	2937521	transposase	Acanthocystis_turfacea_Chlorella_virus(25.0%)	13	NA	NA
WP_002414828.1|465645_468291_+	calcium-translocating P-type ATPase, PMCA-type	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	27.4	7.4e-69
WP_002370946.1|468653_469613_+|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
WP_002381294.1|469692_471699_+	KUP/HAK/KT family potassium transporter	NA	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	33.9	5.5e-64
WP_002385025.1|471768_472467_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002385026.1|472592_474737_+	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	28.0	2.5e-62
WP_002385027.1|474860_476285_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002355754.1|476353_477265_+	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	31.9	1.5e-08
WP_002388495.1|477452_480101_+	DNA polymerase I	NA	F8WQ35	Bacillus_phage	34.6	4.9e-52
WP_002385030.1|480200_481043_+	DNA-formamidopyrimidine glycosylase	NA	A0A127AWE5	Bacillus_phage	30.5	2.8e-22
WP_002385031.1|481039_481639_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_002381296.1|481818_482301_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_002385033.1|482316_483726_+	DnaD domain protein	NA	D2IZY0	Enterococcus_phage	44.7	1.8e-05
WP_002364725.1|483725_484655_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	36.6	6.1e-26
>prophage 35
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	494787	499547	2937521	tRNA	Planktothrix_phage(50.0%)	4	NA	NA
WP_002355769.1|494787_495510_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	1.5e-32
WP_002355770.1|495502_496966_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002355771.1|497136_498243_+	iron-containing alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_002355772.1|498401_499547_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	43.5	4.5e-87
>prophage 36
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	513859	521781	2937521		Planktothrix_phage(16.67%)	11	NA	NA
WP_002355794.1|513859_514918_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.1	2.0e-17
WP_002403713.1|514917_515874_+	ABC transporter ATP-binding protein	NA	A0A1J0FA64	Only_Syngen_Nebraska_virus	23.9	4.2e-06
WP_002355796.1|515914_516985_+	helix-turn-helix domain-containing protein	NA	A0A288TXV8	Enterococcus_phage	49.0	7.6e-89
WP_002355797.1|517385_517907_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	3.0e-14
WP_002355798.1|518020_518221_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_002403714.1|518281_518641_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_002393469.1|518686_519067_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_002358829.1|519134_519494_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_002370719.1|519561_520056_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002403715.1|520073_520589_+	GrpB family protein	NA	A0A2K5B2B6	Erysipelothrix_phage	48.8	1.0e-38
WP_002403716.1|520605_521781_-	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	47.7	2.5e-85
>prophage 37
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	525505	526180	2937521		Bacillus_phage(100.0%)	1	NA	NA
WP_002358841.1|525505_526180_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.1	6.4e-25
>prophage 38
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	529849	531859	2937521	tRNA	Klosneuvirus(100.0%)	1	NA	NA
WP_002355813.1|529849_531859_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	39.2	1.2e-100
>prophage 39
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	538372	609600	2937521	portal,integrase,head,holin,tRNA,protease,tail,terminase	Enterococcus_phage(66.67%)	91	569031:569060	609936:609965
WP_002355822.1|538372_539476_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	34.7	3.7e-22
WP_002355823.1|539661_540084_+	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_002385065.1|540348_540897_+	folate family ECF transporter S component	NA	NA	NA	NA	NA
WP_142426609.1|540948_542715_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	30.7	8.5e-53
WP_002403721.1|542704_544432_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.6	3.2e-44
WP_002391494.1|544557_545325_+	membrane protein	NA	NA	NA	NA	NA
WP_002355830.1|545624_546794_+	peptidase M23	NA	F8WPX7	Bacillus_phage	55.9	3.8e-17
WP_002355832.1|546890_547454_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002355833.1|547499_548024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002386188.1|548075_548945_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_002378112.1|549078_549759_+	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	46.0	2.7e-47
WP_002355836.1|549914_550898_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_002386189.1|551039_551534_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_002358858.1|551526_552048_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002355840.1|552217_552427_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002358859.1|552500_553511_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_002394337.1|553534_554542_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_002355844.1|554531_555200_-	beta-phosphoglucomutase	NA	A0A1D8KNV9	Synechococcus_phage	24.6	8.6e-06
WP_002355845.1|555192_557487_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
WP_002355846.1|557767_559936_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	37.2	7.3e-06
WP_002403725.1|560150_560975_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_002355848.1|561034_561850_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	29.5	1.2e-22
WP_002403726.1|561976_562939_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002358867.1|562919_563219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002403727.1|563211_563529_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_002355856.1|563673_564105_+	VOC family protein	NA	NA	NA	NA	NA
WP_002403728.1|564411_564822_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002403729.1|564814_565099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002403730.1|565111_565492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002403731.1|565891_567067_+	cutinase family protein	NA	NA	NA	NA	NA
WP_002409069.1|567086_567371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002388873.1|567378_567684_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002355866.1|568073_568382_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_002355867.1|568414_568759_+|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_002355868.1|568771_569059_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
569031:569060	attL	AAGTATCAGTTTATCCAGTAGCTAACTAAT	NA	NA	NA	NA
WP_080270595.1|569147_570311_-|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	37.5	1.6e-63
WP_033625925.1|570313_570553_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002395685.1|570554_570794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010815118.1|570857_571286_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_010815119.1|571300_571714_-	helix-turn-helix transcriptional regulator	NA	A0A0M4QX29	Bacillus_phage	53.2	3.6e-31
WP_010815120.1|571945_572155_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SDM7	Streptococcus_phage	39.0	2.3e-05
WP_010829386.1|572158_572443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142426611.1|572457_573180_+	ORF6C domain-containing protein	NA	D2IYT0	Enterococcus_phage	62.7	3.6e-42
WP_002363337.1|573360_573561_+	hypothetical protein	NA	D2IZ57	Enterococcus_phage	90.3	1.0e-23
WP_002363338.1|573629_574037_+	hypothetical protein	NA	A0A097BY30	Enterococcus_phage	39.4	2.3e-17
WP_002363339.1|574049_574793_+	hypothetical protein	NA	U4KJ90	Streptococcus_phage	41.3	8.3e-42
WP_002363341.1|575400_575733_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002363342.1|575719_576370_+	ERF family protein	NA	A0A2I7QT98	Vibrio_phage	65.1	1.6e-41
WP_033625802.1|576366_577008_+	hypothetical protein	NA	U5U4M2	Lactobacillus_phage	35.5	3.1e-29
WP_033625726.1|577063_577969_+	DnaD domain protein	NA	A0A1B0Y2R2	Lactobacillus_phage	38.0	2.5e-16
WP_033625728.1|577973_578273_+	hypothetical protein	NA	D2IZY1	Enterococcus_phage	89.9	5.1e-43
WP_033625729.1|578281_578716_+	RusA family crossover junction endodeoxyribonuclease	NA	D2IYU2	Enterococcus_phage	83.0	1.9e-59
WP_033625731.1|579240_579669_+	phage protein YopX	NA	C9E2N7	Enterococcus_phage	70.3	8.7e-44
WP_002403747.1|579655_580009_+	hypothetical protein	NA	A0A0E3XDK9	Enterococcus_phage	54.2	1.7e-08
WP_002403748.1|580009_580276_+	hypothetical protein	NA	A0A2H4J4D2	uncultured_Caudovirales_phage	50.0	1.5e-09
WP_002403749.1|580272_580614_+	DUF5406 family protein	NA	F0PIH7	Enterococcus_phage	69.4	3.9e-39
WP_033625732.1|580610_580889_+	hypothetical protein	NA	A0A0S2MYC7	Enterococcus_phage	85.9	7.8e-38
WP_002368223.1|580900_581113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033625733.1|581115_581625_+	DUF1642 domain-containing protein	NA	D2IYV1	Enterococcus_phage	73.2	4.9e-62
WP_002367271.1|581759_582008_+	hypothetical protein	NA	D2IZL5	Enterococcus_phage	89.4	1.6e-29
WP_002363356.1|582397_582814_+	autolysin	NA	D2IZL7	Enterococcus_phage	97.1	2.1e-66
WP_002370845.1|583567_583801_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002370843.1|583803_584325_+	ParB N-terminal domain-containing protein	NA	C9E2P7	Enterococcus_phage	94.2	2.8e-89
WP_033625734.1|584311_584920_+	hypothetical protein	NA	C9E2P8	Enterococcus_phage	99.0	4.6e-115
WP_033625736.1|585055_585244_+	hypothetical protein	NA	C9E2P9	Enterococcus_phage	90.3	4.8e-23
WP_033625738.1|585310_585817_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033625739.1|585864_586668_+|terminase	small subunit of terminase	terminase	D2J000	Enterococcus_phage	88.0	9.7e-121
WP_033625740.1|586639_587944_+|terminase	PBSX family phage terminase large subunit	terminase	D2J001	Enterococcus_phage	99.5	6.6e-252
WP_010815133.1|587957_589385_+|portal	phage portal protein	portal	D2J002	Enterococcus_phage	99.6	1.1e-271
WP_002406137.1|589365_589677_+|protease	ribosomal-processing cysteine protease Prp	protease	D2J003	Enterococcus_phage	97.1	3.4e-50
WP_139019470.1|590823_591051_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002406134.1|591319_591988_+	DUF4355 domain-containing protein	NA	D2J005	Enterococcus_phage	98.6	6.9e-72
WP_049088374.1|592003_593041_+	hypothetical protein	NA	D2J006	Enterococcus_phage	99.4	5.5e-193
WP_002415688.1|593054_593393_+|head,tail	phage head-tail connector protein	head,tail	D2J007	Enterococcus_phage	100.0	3.5e-56
WP_002406131.1|593373_593715_+	hypothetical protein	NA	D2J008	Enterococcus_phage	100.0	1.8e-60
WP_002406129.1|593714_594254_+	hypothetical protein	NA	D2J009	Enterococcus_phage	99.4	5.5e-96
WP_002406128.1|594250_594613_+	hypothetical protein	NA	D2J010	Enterococcus_phage	99.2	1.9e-60
WP_010815137.1|594632_595091_+	hypothetical protein	NA	D2J011	Enterococcus_phage	99.3	2.1e-80
WP_002406125.1|595591_595951_+	hypothetical protein	NA	D2J013	Enterococcus_phage	100.0	3.8e-61
WP_010818756.1|595960_600496_+	transglycosylase SLT domain-containing protein	NA	D2J014	Enterococcus_phage	99.9	0.0e+00
WP_010815139.1|600506_600872_+	hypothetical protein	NA	D2J015	Enterococcus_phage	99.2	3.8e-64
WP_002406121.1|600888_603306_+	hypothetical protein	NA	D2J016	Enterococcus_phage	99.9	0.0e+00
WP_002406119.1|603465_604488_+	hypothetical protein	NA	D2J018	Enterococcus_phage	100.0	3.4e-195
WP_002406118.1|604567_604789_+	hypothetical protein	NA	D2J019	Enterococcus_phage	100.0	6.0e-33
WP_002406117.1|604781_605018_+|holin	phage holin	holin	D2J020	Enterococcus_phage	100.0	6.2e-36
WP_010818757.1|605014_606316_+	LysM peptidoglycan-binding domain-containing protein	NA	D2J077	Enterococcus_phage	91.5	3.5e-229
WP_002406115.1|606674_607061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002406113.1|607062_607761_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_033606790.1|607673_608060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033625744.1|608274_608760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010818758.1|609024_609600_-	SHOCT domain-containing protein	NA	X5JB37	Clostridium_phage	38.4	2.2e-18
609936:609965	attR	AAGTATCAGTTTATCCAGTAGCTAACTAAT	NA	NA	NA	NA
>prophage 40
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	614384	616586	2937521		Enterococcus_phage(50.0%)	2	NA	NA
WP_002403785.1|614384_615230_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	37.1	7.4e-39
WP_002403786.1|615239_616586_+	exodeoxyribonuclease VII large subunit	NA	A0A160DEV2	Gordonia_phage	32.8	1.0e-29
>prophage 41
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	639782	644138	2937521	tRNA	Klosneuvirus(50.0%)	2	NA	NA
WP_174776080.1|639782_642563_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	27.8	1.1e-91
WP_002363411.1|642614_644138_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	33.7	3.6e-76
>prophage 42
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	647406	648708	2937521		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_002414731.1|647406_648708_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.6	2.7e-40
>prophage 43
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	660386	663032	2937521		Stenotrophomonas_phage(100.0%)	1	NA	NA
WP_002358905.1|660386_663032_-	pyruvate, phosphate dikinase	NA	A0A2D2W2B1	Stenotrophomonas_phage	39.9	2.5e-85
>prophage 44
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	669876	672114	2937521		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_002355933.1|669876_672114_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	30.9	6.4e-122
>prophage 45
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	676354	676765	2937521		Anguillid_herpesvirus(100.0%)	1	NA	NA
WP_002381321.1|676354_676765_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.1	4.0e-22
>prophage 46
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	681613	688112	2937521		Moraxella_phage(50.0%)	4	NA	NA
WP_002355943.1|681613_683020_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	29.0	5.9e-41
WP_002381323.1|683228_684425_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_002355945.1|684479_684665_-	YjzD family protein	NA	NA	NA	NA	NA
WP_002355946.1|684782_688112_+	DNA polymerase III subunit alpha	NA	A0A291AWR1	Streptomyces_phage	32.1	3.6e-145
>prophage 47
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	692452	696237	2937521		Bacillus_phage(66.67%)	3	NA	NA
WP_002403801.1|692452_693874_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A1D7RI04	Synechococcus_phage	32.1	2.9e-35
WP_002355954.1|694031_694718_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.2	1.1e-27
WP_174776079.1|694728_696237_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	27.2	5.6e-21
>prophage 48
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	703622	704402	2937521		Indivirus(100.0%)	1	NA	NA
WP_174776089.1|703622_704402_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	30.2	2.5e-12
>prophage 49
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	721092	722082	2937521		Tupanvirus(100.0%)	1	NA	NA
WP_010773940.1|721092_722082_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	36.2	4.0e-52
>prophage 50
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	728824	730147	2937521		Streptococcus_phage(100.0%)	1	NA	NA
WP_002386016.1|728824_730147_+	Y-family DNA polymerase	NA	Q6DMX4	Streptococcus_phage	41.2	1.5e-89
>prophage 51
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	748521	750117	2937521		Bacillus_phage(100.0%)	1	NA	NA
WP_002358050.1|748521_750117_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.0	7.0e-22
>prophage 52
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	761396	766970	2937521	tRNA	Bacillus_phage(50.0%)	3	NA	NA
WP_002358037.1|761396_765191_+	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	23.0	6.6e-18
WP_002358035.1|765260_765605_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002358034.1|765923_766970_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	33.9	4.6e-30
>prophage 53
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	771896	775068	2937521		Planktothrix_phage(50.0%)	3	NA	NA
WP_002360585.1|771896_772628_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.5	1.7e-31
WP_002358027.1|772892_773720_+	glutamate racemase	NA	NA	NA	NA	NA
WP_002358026.1|773712_775068_+	ribonuclease PH	NA	A0A2H4UUV7	Bodo_saltans_virus	30.3	1.9e-12
>prophage 54
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	786516	798762	2937521		Staphylococcus_phage(25.0%)	12	NA	NA
WP_174776077.1|786516_787341_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.3	1.3e-72
WP_023894540.1|787391_788102_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA	NA
WP_002358003.1|788255_788630_-	VOC family protein	NA	NA	NA	NA	NA
WP_002363716.1|788778_789225_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_002358000.1|789288_790101_-	sugar-phosphatase	NA	NA	NA	NA	NA
WP_002357999.1|790119_791490_-	dNTPase	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	33.3	1.8e-26
WP_002385999.1|791486_792302_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_002382132.1|792633_793071_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_002381980.1|793138_793765_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_002357995.1|794072_795683_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.7	2.6e-141
WP_142426536.1|795766_798103_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_002388848.1|798144_798762_-	Holliday junction resolvase RecU	NA	R9TMF8	Paenibacillus_phage	37.4	9.9e-25
>prophage 55
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	803290	804007	2937521		Bacillus_phage(100.0%)	1	NA	NA
WP_002357986.1|803290_804007_+	DnaD domain protein	NA	A0A0N7AE27	Bacillus_phage	42.7	1.1e-14
>prophage 56
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	815195	816152	2937521		Streptococcus_phage(100.0%)	1	NA	NA
WP_002381974.1|815195_816152_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	27.9	1.4e-17
>prophage 57
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	832809	840227	2937521		Bacillus_phage(50.0%)	7	NA	NA
WP_142426539.1|832809_833670_+	DegV family EDD domain-containing protein	NA	A0A1X9I5J4	Streptococcus_phage	24.6	9.3e-13
WP_029645232.1|833787_834489_+	MIP family channel protein	NA	NA	NA	NA	NA
WP_002357947.1|834662_835367_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.2	1.7e-44
WP_002357946.1|835373_837203_+	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	37.0	1.1e-34
WP_002385989.1|837199_838510_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002365516.1|838509_839364_+	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_002357943.1|839420_840227_+	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	34.0	2.2e-32
>prophage 58
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	847636	848962	2937521		Dickeya_phage(100.0%)	1	NA	NA
WP_002363749.1|847636_848962_-	2-hydroxycarboxylate transporter family protein	NA	A0A140XAH4	Dickeya_phage	51.5	1.8e-18
>prophage 59
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	861053	862094	2937521		Bacillus_virus(100.0%)	1	NA	NA
WP_002385982.1|861053_862094_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.4	2.7e-30
>prophage 60
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	868513	872924	2937521		Lactobacillus_phage(66.67%)	4	NA	NA
WP_002357907.1|868513_869122_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	51.5	1.2e-54
WP_002357906.1|869140_870397_+	NADPH-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	53.5	4.9e-63
WP_002357905.1|870808_872299_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002397195.1|872249_872924_+	AP2 domain-containing protein	NA	A0A2I7S7V5	Vibrio_phage	38.9	6.0e-07
>prophage 61
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	888310	894335	2937521		Pandoravirus(50.0%)	6	NA	NA
WP_002357890.1|888310_889744_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	31.6	1.1e-53
WP_002385973.1|889768_890818_+	oxidoreductase	NA	NA	NA	NA	NA
WP_002357887.1|891291_891750_+	DUF441 domain-containing protein	NA	NA	NA	NA	NA
WP_002392528.1|891788_892244_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_002381957.1|892203_892467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357882.1|892622_894335_-	NFACT family protein	NA	A0A1J0F9J4	Only_Syngen_Nebraska_virus	46.4	2.8e-08
>prophage 62
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	898192	908828	2937521		Streptococcus_phage(40.0%)	11	NA	NA
WP_002357878.1|898192_898960_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.6	1.4e-12
WP_002357877.1|898991_899453_-	threonine/serine exporter family protein	NA	NA	NA	NA	NA
WP_002404240.1|899464_900241_-	threonine/serine exporter family protein	NA	NA	NA	NA	NA
WP_002357875.1|900472_900679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002381954.1|900696_901476_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_002381953.1|901690_902410_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.0	1.6e-34
WP_002357872.1|902409_903879_+	sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.0	2.5e-21
WP_002357871.1|903916_904468_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357870.1|904482_905184_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357869.1|905289_907398_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	54.1	8.0e-199
WP_002404239.1|907655_908828_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	51.2	2.4e-104
>prophage 63
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	917132	937550	2937521	holin,tail,tRNA	Enterococcus_phage(38.46%)	20	NA	NA
WP_002357859.1|917132_919529_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.1	1.7e-19
WP_002360497.1|919553_919904_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_002393873.1|919986_920217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002382232.1|920276_920762_-	toxin	NA	A0A097BY56	Enterococcus_phage	70.5	4.4e-60
WP_002357856.1|920796_921279_-	helix-turn-helix transcriptional regulator	NA	R9QTP6	Staphylococcus_phage	48.6	1.2e-20
WP_002392532.1|921674_922430_+	DnaD domain protein	NA	A0A0K0MX39	Streptococcus_phage	56.0	8.7e-31
WP_002404235.1|922448_923291_+	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	31.0	3.3e-31
WP_002357852.1|923357_923750_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002357851.1|923769_924177_+	RinA family phage transcriptional activator	NA	NA	NA	NA	NA
WP_002381948.1|924827_925340_+|tail	phage major tail protein, TP901-1 family	tail	W6LP72	Streptococcus_phage	49.4	8.8e-35
WP_002357848.1|925372_925732_+	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	32.2	7.6e-09
WP_002392533.1|925824_926118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002404234.1|926107_929041_+	membrane protein	NA	W8EBC4	Geobacillus_phage	41.2	6.9e-15
WP_002365553.1|929042_929969_+|tail	phage tail family protein	tail	C9E2K5	Enterococcus_phage	78.6	9.0e-147
WP_002357844.1|929981_931439_+|tail	phage tail protein	tail	C9E2K6	Enterococcus_phage	47.7	9.5e-175
WP_002357842.1|933266_933662_+|holin	phage holin family protein	holin	F0PIJ6	Enterococcus_phage	48.9	2.8e-33
WP_002392536.1|933780_934905_+	SH3 domain-containing protein	NA	A0A139ZVY1	Enterococcus_phage	44.3	2.0e-76
WP_002357840.1|935057_935978_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_002363808.1|936003_936954_+	riboflavin biosynthesis protein RibF	NA	NA	NA	NA	NA
WP_002361699.1|936953_937550_+	N-acetyltransferase	NA	A0A1P8CWJ6	Bacillus_phage	37.1	1.5e-22
>prophage 64
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	943484	946145	2937521		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_002357830.1|943484_946145_+	magnesium-translocating P-type ATPase	NA	M1HXH2	Paramecium_bursaria_Chlorella_virus	24.1	1.7e-44
>prophage 65
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	949459	953723	2937521		Chrysochromulina_ericina_virus(33.33%)	3	NA	NA
WP_002357825.1|949459_951289_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	48.3	4.6e-134
WP_002357822.1|951580_952750_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.0	2.7e-23
WP_002404229.1|952988_953723_+	serine/threonine protein phosphatase	NA	A7KV25	Bacillus_phage	31.8	2.1e-13
>prophage 66
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	961875	962577	2937521		Planktothrix_phage(100.0%)	1	NA	NA
WP_002363831.1|961875_962577_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	4.9e-36
>prophage 67
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	993328	997902	2937521		Bacillus_virus(50.0%)	4	NA	NA
WP_002357780.1|993328_994243_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.4	1.4e-88
WP_002404217.1|994285_994747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002386538.1|994943_995474_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_010776308.1|995562_997902_-	ABC transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	39.5	4.5e-33
>prophage 68
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1008637	1017120	2937521		Only_Syngen_Nebraska_virus(33.33%)	5	NA	NA
WP_002388982.1|1008637_1011250_+	magnesium-translocating P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	25.6	7.4e-53
WP_002357768.1|1011848_1012964_+	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	E3SJ83	Synechococcus_phage	28.4	8.1e-09
WP_002357767.1|1012966_1013944_+	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_002357766.1|1014086_1015706_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_002357765.1|1015713_1017120_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.8	5.6e-47
>prophage 69
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1028706	1031012	2937521		Lactococcus_phage(50.0%)	3	NA	NA
WP_002357750.1|1028706_1028907_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	72.7	3.3e-22
WP_002357749.1|1029204_1030326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357747.1|1030661_1031012_-	helix-turn-helix transcriptional regulator	NA	Q5YAA4	Bacillus_phage	56.9	1.8e-15
>prophage 70
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1038022	1043589	2937521	tRNA	Hokovirus(50.0%)	3	NA	NA
WP_002357738.1|1038022_1039372_+	DEAD/DEAH box helicase	NA	A0A1V0SGU7	Hokovirus	31.4	2.8e-40
WP_002381934.1|1039917_1040601_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002357736.1|1040946_1043589_+|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	34.1	1.1e-67
>prophage 71
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1062946	1072600	2937521		Staphylococcus_phage(50.0%)	8	NA	NA
WP_174776073.1|1062946_1065049_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	36.3	7.6e-117
WP_002357706.1|1065324_1065768_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_002404205.1|1065787_1066336_+	CvpA family protein	NA	NA	NA	NA	NA
WP_002361764.1|1066446_1068813_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	52.2	2.0e-25
WP_002357703.1|1068910_1069225_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	40.4	2.3e-17
WP_002371199.1|1069389_1071186_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_002369461.1|1071338_1071596_+	DUF3884 family protein	NA	NA	NA	NA	NA
WP_002357699.1|1071700_1072600_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.6	1.6e-23
>prophage 72
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1077202	1081176	2937521		Streptococcus_phage(66.67%)	3	NA	NA
WP_025193064.1|1077202_1078669_+	ABC-F type ribosomal protection protein	NA	Q6DMX7	Streptococcus_phage	37.5	4.3e-74
WP_002357691.1|1078709_1079996_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	58.0	1.8e-23
WP_002357690.1|1080117_1081176_-	type I restriction enzyme HsdR N-terminal domain-containing protein	NA	A0A1S5SAB0	Streptococcus_phage	59.1	3.1e-103
>prophage 73
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1119372	1125127	2937521		Paramecium_bursaria_Chlorella_virus(33.33%)	3	NA	NA
WP_002403620.1|1119372_1121709_+	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	25.1	7.8e-38
WP_002380276.1|1122025_1123912_+	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	31.9	1.5e-50
WP_002360364.1|1124020_1125127_+	RNA polymerase sigma factor RpoD	NA	F4YCU2	Synechococcus_phage	39.6	1.2e-39
>prophage 74
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1134617	1140284	2937521		uncultured_Mediterranean_phage(50.0%)	6	NA	NA
WP_002374887.1|1134617_1135367_-	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	44.2	3.8e-26
WP_142426577.1|1135548_1136640_+	DUF871 family protein	NA	NA	NA	NA	NA
WP_002357629.1|1136834_1137764_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_002360354.1|1137932_1138823_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.9	4.9e-33
WP_002390627.1|1138887_1139682_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	31.9	2.2e-08
WP_002357625.1|1139678_1140284_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.5	2.7e-14
>prophage 75
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1144911	1146354	2937521		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_002403615.1|1144911_1146354_+	ATP-dependent DNA helicase RecQ	NA	F2NZ48	Diadromus_pulchellus_ascovirus	36.5	3.2e-58
>prophage 76
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1151029	1157852	2937521	tRNA	Bacillus_phage(25.0%)	8	NA	NA
WP_002357604.1|1151029_1151305_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	70.8	1.2e-25
WP_002403614.1|1151611_1152652_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002403613.1|1152661_1153918_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_174776070.1|1153927_1154467_+	YpiB family protein	NA	G3MAV7	Bacillus_virus	31.6	1.5e-16
WP_002357595.1|1154504_1155389_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	38.7	3.5e-55
WP_002363944.1|1155512_1155863_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_002357591.1|1155855_1156635_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_002403612.1|1156631_1157852_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	51.7	1.0e-44
>prophage 77
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1162287	1163454	2937521		Pandoravirus(100.0%)	1	NA	NA
WP_002403609.1|1162287_1163454_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	36.1	3.9e-38
>prophage 78
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1168648	1169497	2937521		Staphylococcus_phage(100.0%)	1	NA	NA
WP_174776069.1|1168648_1169497_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	36.2	1.9e-13
>prophage 79
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1172983	1178177	2937521	tRNA	Tupanvirus(25.0%)	5	NA	NA
WP_002403605.1|1172983_1174873_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.2	2.7e-49
WP_002357569.1|1174890_1175838_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	66.9	2.9e-124
WP_002357568.1|1175855_1176350_+	trimethoprim-resistant dihydrofolate reductase DfrE	NA	A0A1L7N103	Ralstonia_phage	38.8	1.2e-20
WP_002365666.1|1176373_1177543_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_002357566.1|1177556_1178177_-	transcriptional repressor LexA	NA	A0A0N9RTK0	Paenibacillus_phage	32.3	1.6e-06
>prophage 80
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1182232	1184254	2937521		Brevibacillus_phage(50.0%)	2	NA	NA
WP_002357562.1|1182232_1183093_+	glucosaminidase domain-containing protein	NA	A0A0K2CP65	Brevibacillus_phage	45.8	9.0e-24
WP_002380307.1|1183321_1184254_+	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	63.2	1.3e-105
>prophage 81
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1189024	1190773	2937521		Bacillus_phage(100.0%)	1	NA	NA
WP_002371139.1|1189024_1190773_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.9	3.2e-52
>prophage 82
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1194502	1200504	2937521	transposase	Tupanvirus(33.33%)	6	NA	NA
WP_002357549.1|1194502_1195939_+	catalase	NA	A0A2K9L0T1	Tupanvirus	37.4	1.9e-90
WP_174776068.1|1196161_1196923_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_002357547.1|1196931_1197561_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_010773967.1|1197779_1197902_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002381906.1|1197951_1198776_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	41.8	2.0e-49
WP_002363970.1|1199070_1200504_-	deoxyribodipyrimidine photo-lyase	NA	A0A1V0SGL1	Hokovirus	34.3	7.1e-66
>prophage 83
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1217083	1224152	2937521		Bacillus_virus(66.67%)	3	NA	NA
WP_002357529.1|1217083_1219330_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.3	2.1e-165
WP_002357527.1|1219619_1222082_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	30.7	2.9e-99
WP_002381887.1|1222094_1224152_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.3	4.5e-114
>prophage 84
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1240830	1241598	2937521		Bacillus_virus(100.0%)	1	NA	NA
WP_002357498.1|1240830_1241598_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.6	2.2e-13
>prophage 85
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1246489	1255709	2937521	protease,tRNA	Erwinia_phage(25.0%)	8	NA	NA
WP_002360239.1|1246489_1247893_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.7	4.4e-44
WP_002357489.1|1247907_1248456_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
WP_002357488.1|1248484_1249384_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.2	6.3e-36
WP_002357486.1|1249595_1250903_-|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_002357484.1|1251010_1253089_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	35.8	3.8e-100
WP_002363999.1|1253273_1253927_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002382350.1|1254017_1254881_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_002357481.1|1254941_1255709_-	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	39.8	1.3e-26
>prophage 86
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1275236	1289302	2937521	transposase	Staphylococcus_phage(33.33%)	17	NA	NA
WP_024797089.1|1275236_1275911_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	7.0e-32
WP_010717287.1|1276000_1276960_+|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
WP_002403846.1|1277177_1277909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002364016.1|1277910_1278765_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.3	2.0e-15
WP_002364017.1|1278761_1279130_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002360207.1|1279278_1279728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002389020.1|1279842_1280397_-	signal peptidase I	NA	NA	NA	NA	NA
WP_002380348.1|1280415_1281858_-	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	26.8	4.1e-21
WP_002364020.1|1281945_1282164_-	YozE family protein	NA	NA	NA	NA	NA
WP_002364021.1|1282169_1282685_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_002357446.1|1282701_1283355_-	YpmS family protein	NA	NA	NA	NA	NA
WP_002384468.1|1283347_1284247_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_002414712.1|1284350_1285193_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	42.4	3.1e-21
WP_002357443.1|1285324_1285978_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_002360203.1|1286171_1286369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002357441.1|1286474_1286987_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.2	3.5e-31
WP_002384465.1|1286989_1289302_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.6	1.1e-68
>prophage 87
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1294196	1294751	2937521		Lactobacillus_phage(100.0%)	1	NA	NA
WP_002357432.1|1294196_1294751_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	29.1	2.0e-08
>prophage 88
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1298170	1300653	2937521		Bacillus_phage(100.0%)	2	NA	NA
WP_002364032.1|1298170_1298881_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.8	6.7e-41
WP_002381855.1|1298877_1300653_+	PAS domain-containing protein	NA	W8CYF6	Bacillus_phage	33.8	2.8e-27
>prophage 89
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1316615	1321210	2937521		Halovirus(33.33%)	4	NA	NA
WP_002364043.1|1316615_1317695_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	37.6	4.2e-63
WP_174776066.1|1317697_1318981_-	dihydroorotase	NA	NA	NA	NA	NA
WP_002357411.1|1318989_1319916_-	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	33.9	1.3e-28
WP_002364045.1|1319929_1321210_-	uracil transporter	NA	Q9KX94	Enterobacteria_phage	37.6	4.1e-65
>prophage 90
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1326136	1336598	2937521	tRNA	Bacillus_phage(33.33%)	12	NA	NA
WP_002357404.1|1326136_1326343_+	cold shock domain-containing protein	NA	Q9AZD3	Lactococcus_phage	56.9	4.0e-15
WP_002364050.1|1326447_1326909_-	EbsA family protein	NA	NA	NA	NA	NA
WP_002364051.1|1327009_1327417_+	ribonuclease HI family protein	NA	NA	NA	NA	NA
WP_002384452.1|1327546_1328062_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_010824699.1|1328058_1328820_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	31.4	5.7e-22
WP_002364054.1|1328975_1330760_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.2	1.0e-45
WP_002364055.1|1330759_1332511_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	31.2	1.0e-53
WP_002357397.1|1332708_1332927_-	YneF family protein	NA	NA	NA	NA	NA
WP_002357396.1|1333121_1334015_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	32.2	1.9e-24
WP_002364059.1|1334025_1334493_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_002364060.1|1334492_1335155_-	YdeI/OmpD-associated family protein	NA	NA	NA	NA	NA
WP_002357324.1|1335335_1336598_-|tRNA	tyrosine--tRNA ligase	tRNA	A0A1L2CUL7	Pectobacterium_phage	42.0	2.6e-80
>prophage 91
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1345000	1345897	2937521		Bacillus_phage(100.0%)	1	NA	NA
WP_002357314.1|1345000_1345897_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	51.4	2.1e-76
>prophage 92
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1353250	1359366	2937521		Bacillus_virus(25.0%)	7	NA	NA
WP_023627909.1|1353250_1354102_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.6	8.1e-17
WP_002357302.1|1354019_1354829_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.0	2.7e-14
WP_002357300.1|1354845_1355730_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_002357299.1|1355729_1356650_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_002357298.1|1356772_1357627_-	phosphate ABC transporter substrate-binding protein PstS	NA	E3SLK5	Synechococcus_phage	22.0	9.0e-08
WP_002364071.1|1357802_1358687_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002361935.1|1358679_1359366_-	cell division ATP-binding protein FtsE	NA	W5SAS9	Pithovirus	26.3	5.2e-14
>prophage 93
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1364808	1368843	2937521		Streptococcus_phage(50.0%)	6	NA	NA
WP_002384446.1|1364808_1366125_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	42.1	2.1e-80
WP_002364074.1|1366224_1366560_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002357286.1|1366680_1366968_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357285.1|1367109_1367772_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	50.0	6.2e-49
WP_002357284.1|1367761_1367995_+	DUF2829 domain-containing protein	NA	A8AT88	Listeria_phage	35.2	1.9e-08
WP_002384442.1|1368057_1368843_+	3-oxoacyl-ACP reductase	NA	A0A0K0KVL6	Prochlorococcus_phage	25.0	4.1e-07
>prophage 94
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1372027	1382209	2937521		Synechococcus_phage(42.86%)	10	NA	NA
WP_142428103.1|1372027_1373569_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	52.6	2.1e-79
WP_002364081.1|1373565_1374138_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.1	9.2e-25
WP_002384439.1|1374134_1375166_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	44.4	1.1e-55
WP_002384438.1|1375167_1376607_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.3	4.7e-49
WP_002384437.1|1376582_1378802_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.9	2.8e-146
WP_002364085.1|1378798_1379473_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_002357271.1|1379473_1379725_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002403834.1|1379738_1380452_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3ELR0	Synechococcus_phage	42.5	3.7e-47
WP_002384435.1|1380603_1381728_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_002384434.1|1381720_1382209_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.0	3.8e-19
>prophage 95
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1406586	1410038	2937521		Streptococcus_phage(50.0%)	2	NA	NA
WP_002364096.1|1406586_1408647_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	43.2	5.9e-146
WP_002384421.1|1408688_1410038_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	30.4	2.2e-37
>prophage 96
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1419750	1458266	2937521	transposase,integrase	Streptococcus_phage(56.25%)	38	1428972:1428996	1434038:1434062
WP_002297659.1|1419750_1420929_-|integrase	site-specific integrase	integrase	S6C485	Thermus_phage	30.5	3.4e-29
WP_002297662.1|1421031_1421343_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002360096.1|1421691_1421937_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002297668.1|1421930_1422332_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_142665889.1|1422899_1424735_-	beta-galactosidase	NA	NA	NA	NA	NA
WP_002330923.1|1424906_1426169_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002360092.1|1426306_1426531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002298159.1|1426527_1426692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002298157.1|1426785_1428078_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	40.4	3.9e-31
WP_002313174.1|1428351_1428612_-	hypothetical protein	NA	NA	NA	NA	NA
1428972:1428996	attL	TTTCTATTTACACAAAATATTTTAC	NA	NA	NA	NA
WP_101495273.1|1429216_1430378_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	2.0e-79
WP_077497620.1|1430450_1430657_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	U5P429	Shigella_phage	53.3	2.0e-06
WP_002383094.1|1430660_1430774_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_002297874.1|1430926_1431322_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_002287875.1|1431334_1432183_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_002287874.1|1432197_1433025_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	M4QNT1	Ostreococcus_lucimarinus_virus	38.0	5.4e-50
WP_002349114.1|1433036_1433897_-	Rossmann-like and DUF2520 domain-containing protein	NA	NA	NA	NA	NA
WP_002297866.1|1435629_1436949_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
1434038:1434062	attR	GTAAAATATTTTGTGTAAATAGAAA	NA	NA	NA	NA
WP_002285815.1|1436945_1437599_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.2	4.0e-24
WP_002330916.1|1439169_1440546_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002298083.1|1440545_1441202_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.1	1.3e-22
WP_002298080.1|1441211_1442489_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002330914.1|1442675_1443161_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_010706480.1|1443316_1443667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002360081.1|1444259_1444487_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_002371002.1|1444557_1445748_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_002298831.1|1445852_1446764_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	41.1	1.3e-57
WP_002298830.1|1446782_1447787_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	66.3	1.4e-121
WP_002384404.1|1447783_1449907_-|transposase	transposase	transposase	A0A1S5SF30	Streptococcus_phage	58.7	2.4e-174
WP_174776064.1|1449911_1452359_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.3	0.0e+00
WP_002298826.1|1452345_1452735_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	66.7	2.5e-42
WP_002383098.1|1452786_1453527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002360078.1|1453533_1454370_-	abortive infection family protein	NA	NA	NA	NA	NA
WP_002298823.1|1454434_1454938_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	61.2	3.1e-56
WP_002298822.1|1454950_1455172_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	87.7	4.5e-28
WP_002346915.1|1455568_1456819_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	62.1	6.1e-114
WP_002330905.1|1456950_1457085_-	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_002360076.1|1457081_1458266_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	62.1	1.0e-142
>prophage 97
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1462461	1464603	2937521		Streptococcus_phage(100.0%)	4	NA	NA
WP_174776063.1|1462461_1463478_-	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	58.3	1.5e-102
WP_002298801.1|1463547_1463892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002298800.1|1463901_1464276_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	67.9	1.9e-34
WP_002298798.1|1464288_1464603_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	53.8	4.6e-26
>prophage 98
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1473071	1475574	2937521		Streptococcus_phage(50.0%)	2	NA	NA
WP_002357169.1|1473071_1473671_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	42.7	3.0e-34
WP_002364138.1|1473771_1475574_+	glycerophosphoryl diester phosphodiesterase membrane domain-containing protein	NA	I6XE30	Staphylococcus_phage	23.3	3.5e-09
>prophage 99
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1483614	1484868	2937521	protease	Bacillus_virus(100.0%)	1	NA	NA
WP_002357154.1|1483614_1484868_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	1.5e-144
>prophage 100
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1494664	1495384	2937521		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_002357140.1|1494664_1495384_-	aquaporin family protein	NA	M1H9L8	Acanthocystis_turfacea_Chlorella_virus	34.0	4.6e-29
>prophage 101
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1503902	1506608	2937521		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_002377094.1|1503902_1506608_-	cation-translocating P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	29.2	3.3e-72
>prophage 102
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1510166	1587195	2937521	portal,integrase,transposase,holin,terminase,tRNA,capsid,tail,head	Enterococcus_phage(29.41%)	87	1550071:1550089	1587251:1587269
WP_108119837.1|1510166_1511569_-|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	42.8	5.4e-34
WP_002357120.1|1511641_1513477_-	alkaline phosphatase family protein	NA	NA	NA	NA	NA
WP_002357118.1|1513685_1513835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002403855.1|1513985_1514345_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_002360043.1|1514544_1514895_-	DUF2200 domain-containing protein	NA	NA	NA	NA	NA
WP_002357110.1|1514968_1515973_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002403856.1|1515966_1517043_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002403857.1|1517053_1517887_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002357107.1|1517867_1518659_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002357106.1|1518674_1519145_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002360041.1|1519156_1519621_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002388166.1|1519647_1522419_-	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_002364161.1|1522989_1524351_-	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA	NA
WP_002357099.1|1524367_1525192_-	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA	NA
WP_002357098.1|1525545_1526844_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	81.1	1.2e-192
WP_002362045.1|1526975_1527731_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_002357094.1|1527779_1528973_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_002357093.1|1529099_1530101_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_002357092.1|1530140_1531178_-	SorC family transcriptional regulator	NA	NA	NA	NA	NA
WP_002364163.1|1531597_1532476_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	22.8	5.2e-11
WP_002364165.1|1532618_1533188_-	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_002357086.1|1533184_1533691_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_002403858.1|1533674_1534511_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_002360034.1|1534664_1536434_-|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L424	Tupanvirus	30.3	3.0e-13
WP_002364168.1|1536451_1537753_-|tRNA	histidine--tRNA ligase	tRNA	A0A2I2L577	Orpheovirus	26.6	8.8e-23
WP_002357080.1|1538110_1538557_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_002357079.1|1538580_1540794_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	38.0	1.3e-10
WP_002357078.1|1541008_1541761_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_002357075.1|1541762_1542710_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_002383131.1|1542725_1543220_-	DUF3013 family protein	NA	NA	NA	NA	NA
WP_002364174.1|1543167_1543845_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
WP_002360030.1|1543973_1545251_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	49.9	1.8e-105
WP_002380425.1|1545578_1545857_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002383133.1|1546001_1546508_+	universal stress protein	NA	NA	NA	NA	NA
WP_002357064.1|1546619_1547807_-	acetate kinase	NA	NA	NA	NA	NA
WP_033783413.1|1547831_1548842_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002360027.1|1548970_1549324_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357060.1|1549323_1549758_-	ComGF family competence protein	NA	NA	NA	NA	NA
WP_172613785.1|1549747_1550119_-	type II secretion system protein	NA	NA	NA	NA	NA
1550071:1550089	attL	CCACTCCCCATCTGAAATT	NA	NA	NA	NA
WP_033624657.1|1550873_1551815_-	ferrochelatase	NA	NA	NA	NA	NA
WP_002378444.1|1552531_1552804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357053.1|1552875_1553076_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	80.3	1.6e-24
WP_010784601.1|1553928_1555188_-	LysM peptidoglycan-binding domain-containing protein	NA	C9E2L1	Enterococcus_phage	89.2	2.5e-208
WP_002378446.1|1555200_1555581_-|holin	phage holin family protein	holin	A0A097QQ04	Enterococcus_phage	100.0	1.1e-61
WP_002368228.1|1555591_1555714_-	XkdX family protein	NA	NA	NA	NA	NA
WP_002363385.1|1555715_1556111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002363384.1|1556129_1556582_-	hypothetical protein	NA	C0LZY6	Enterococcus_phage	40.3	3.3e-17
WP_002363383.1|1556598_1557339_-	hypothetical protein	NA	A0A1X9IGH6	Lactococcus_phage	34.6	1.2e-27
WP_010784602.1|1557344_1558790_-|tail	phage tail protein	tail	A0A1X9IGI5	Lactococcus_phage	39.2	9.0e-77
WP_010785045.1|1558789_1559512_-	hypothetical protein	NA	C5IUK4	Streptococcus_phage	38.8	6.1e-42
WP_142428076.1|1559508_1563963_-|tail	phage tail tape measure protein	tail	M1PKM6	Streptococcus_phage	48.3	6.4e-89
WP_002364305.1|1563949_1564255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002409775.1|1564323_1564722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010785047.1|1564784_1565093_-	hypothetical protein	NA	L0P8M2	Lactobacillus_phage	77.1	2.7e-07
WP_002364302.1|1565095_1565701_-|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_002363373.1|1565719_1566112_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_002363372.1|1566108_1566447_-	HK97 gp10 family phage protein	NA	A0A1L2K255	Streptococcus_phage	38.7	1.8e-12
WP_002364301.1|1566443_1566719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002363369.1|1566715_1567048_-|head,tail	phage head-tail connector protein	head,tail	A0A1W6JNH7	Staphylococcus_phage	38.5	2.7e-08
WP_002363368.1|1567118_1568015_-	hypothetical protein	NA	U3PDP8	Lactobacillus_phage	49.8	3.3e-69
WP_142428077.1|1568027_1568681_-	DUF4355 domain-containing protein	NA	NA	NA	NA	NA
WP_002363365.1|1568785_1569712_-|capsid	minor capsid protein	capsid	A0A097QPZ9	Enterococcus_phage	98.0	1.8e-131
WP_010784607.1|1569704_1571189_-|portal	phage portal protein	portal	A0A097QPZ5	Enterococcus_phage	99.6	3.8e-139
WP_002369892.1|1571188_1572472_-|terminase	PBSX family phage terminase large subunit	terminase	Q9AZ91	Lactobacillus_prophage	65.5	6.0e-157
WP_002364295.1|1572452_1572887_-|terminase	terminase small subunit	terminase	A7J290	Streptococcus_phage	64.5	1.8e-44
WP_010784608.1|1572918_1573149_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010784609.1|1573581_1574046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010784610.1|1574075_1575026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357018.1|1575735_1576152_-	autolysin	NA	D2IZ17	Enterococcus_phage	99.3	1.4e-67
WP_024797260.1|1577058_1577466_-	RusA family crossover junction endodeoxyribonuclease	NA	D2IYU2	Enterococcus_phage	85.0	2.0e-58
WP_002364343.1|1577462_1578320_-	helix-turn-helix domain-containing protein	NA	A0A0P0ICZ8	Lactobacillus_phage	36.1	1.1e-24
WP_002357010.1|1578319_1578520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002364344.1|1578524_1579166_-	hypothetical protein	NA	U5U4M2	Lactobacillus_phage	36.0	4.8e-30
WP_002364345.1|1579170_1579905_-	ERF family protein	NA	A0A1W6JNQ5	Staphylococcus_phage	29.9	2.3e-20
WP_002357007.1|1579897_1580215_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357006.1|1580434_1580989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033783419.1|1581273_1581612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002399426.1|1581648_1581858_-	hypothetical protein	NA	D2IZ57	Enterococcus_phage	74.2	1.4e-18
WP_002364350.1|1581912_1582101_+	YegP family protein	NA	NA	NA	NA	NA
WP_002364352.1|1582126_1582852_-	phage regulatory protein	NA	A0A0P0IDD0	Lactobacillus_phage	54.0	6.4e-31
WP_002381719.1|1582890_1583202_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010712611.1|1583798_1583996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002358110.1|1584008_1584191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002392358.1|1584489_1584822_+	helix-turn-helix transcriptional regulator	NA	D2IZV9	Enterococcus_phage	57.3	2.5e-30
WP_002378467.1|1584839_1585184_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A097QQ08	Enterococcus_phage	71.7	3.2e-41
WP_010784612.1|1585218_1585947_+	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	48.9	2.4e-22
WP_002388210.1|1586046_1587195_+|integrase	site-specific integrase	integrase	A0A1C8E994	Bacillus_phage	30.7	2.3e-38
1587251:1587269	attR	CCACTCCCCATCTGAAATT	NA	NA	NA	NA
>prophage 103
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1594783	1598897	2937521		Planktothrix_phage(50.0%)	3	NA	NA
WP_002384339.1|1594783_1595533_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.5	2.4e-33
WP_002364244.1|1595650_1596352_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002362065.1|1596473_1598897_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.0	2.2e-83
>prophage 104
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1602537	1606034	2937521		Bacillus_phage(50.0%)	2	NA	NA
WP_002364246.1|1602537_1604304_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	25.8	1.6e-22
WP_002364247.1|1604300_1606034_-	thiol reductant ABC exporter subunit CydD	NA	A0A2H4UU96	Bodo_saltans_virus	24.3	1.1e-12
>prophage 105
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1618800	1624108	2937521		Tupanvirus(66.67%)	4	NA	NA
WP_002364256.1|1618800_1619775_-	ribose-phosphate diphosphokinase	NA	A0A2K9L2G2	Tupanvirus	31.9	9.8e-35
WP_002360005.1|1619987_1620737_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	2.6e-11
WP_002364257.1|1620733_1621603_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_002362078.1|1622569_1624108_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	24.5	1.0e-33
>prophage 106
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1627237	1628308	2937521		Planktothrix_phage(100.0%)	1	NA	NA
WP_002356948.1|1627237_1628308_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.1	4.0e-29
>prophage 107
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1634703	1639491	2937521		Paramecium_bursaria_Chlorella_virus(50.0%)	3	NA	NA
WP_002356940.1|1634703_1636512_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	37.8	1.2e-97
WP_002356939.1|1636954_1637788_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_002356938.1|1637784_1639491_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	2.0e-19
>prophage 108
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1647950	1649291	2937521		Klosneuvirus(100.0%)	1	NA	NA
WP_002356929.1|1647950_1649291_-	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	25.0	2.0e-06
>prophage 109
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1652997	1653957	2937521		Klosneuvirus(100.0%)	1	NA	NA
WP_016618430.1|1652997_1653957_-	GDP-mannose 4,6-dehydratase	NA	A0A1V0SKV4	Klosneuvirus	37.0	3.4e-48
>prophage 110
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1658720	1666222	2937521		uncultured_marine_virus(33.33%)	6	NA	NA
WP_002401288.1|1658720_1659701_-	glycosyltransferase	NA	A0A0F7L2F7	uncultured_marine_virus	33.9	2.3e-07
WP_002401287.1|1659702_1660761_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_002378508.1|1660773_1661478_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_142448455.1|1662615_1664211_-	GW domain-containing glycosaminoglycan-binding protein	NA	D6PSS2	Lactobacillus_phage	27.0	1.0e-17
WP_002400614.1|1664530_1665373_-	LicD family protein	NA	NA	NA	NA	NA
WP_010707337.1|1665388_1666222_-	glycosyltransferase	NA	F2Y1U7	Organic_Lake_phycodnavirus	31.6	1.2e-12
>prophage 111
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1676465	1683726	2937521		Escherichia_phage(40.0%)	9	NA	NA
WP_002356901.1|1676465_1677683_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.0	1.5e-08
WP_002356900.1|1677695_1678490_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002356899.1|1678737_1679079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002356898.1|1679152_1679503_-	DUF2304 domain-containing protein	NA	NA	NA	NA	NA
WP_002379615.1|1679502_1680228_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010707333.1|1680286_1681129_-	dTDP-4-dehydrorhamnose reductase	NA	A0A1D8EQE2	Escherichia_phage	32.8	2.5e-26
WP_002359895.1|1681221_1682250_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	41.9	1.9e-68
WP_174776060.1|1682274_1682847_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	49.7	7.0e-41
WP_002364387.1|1682859_1683726_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	63.9	6.1e-105
>prophage 112
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1696933	1697938	2937521		Clostridium_phage(100.0%)	1	NA	NA
WP_002356866.1|1696933_1697938_-	nucleoid-associated protein	NA	A0A090D855	Clostridium_phage	22.3	8.6e-10
>prophage 113
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1717920	1721479	2937521		Bacillus_phage(100.0%)	2	NA	NA
WP_002362898.1|1717920_1719648_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.6	7.8e-35
WP_002404136.1|1719700_1721479_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.8	2.3e-53
>prophage 114
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1737224	1745796	2937521		Streptococcus_phage(25.0%)	6	NA	NA
WP_002362887.1|1737224_1739063_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	25.3	5.2e-21
WP_002356813.1|1739309_1740530_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002404129.1|1740553_1741033_+	nucleoside 2-deoxyribosyltransferase	NA	A0A1W6JK28	Lactococcus_phage	56.9	9.1e-42
WP_002404128.1|1741067_1743674_-	ATP-dependent chaperone ClpB	NA	A0A2I7SAX5	Vibrio_phage	34.4	3.3e-130
WP_002362881.1|1743945_1744317_-	DoxX family protein	NA	NA	NA	NA	NA
WP_002356808.1|1744500_1745796_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	24.7	1.1e-17
>prophage 115
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1750289	1758957	2937521	tRNA	Brevibacillus_phage(33.33%)	8	NA	NA
WP_002366997.1|1750289_1750931_-	glycoside hydrolase family 73 protein	NA	S5M633	Brevibacillus_phage	44.4	1.7e-27
WP_002384259.1|1751030_1751210_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002382789.1|1751269_1751794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002389307.1|1751960_1752920_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_002385776.1|1752966_1754319_-|tRNA	asparagine--tRNA ligase	tRNA	L7RCX2	Acanthamoeba_polyphaga_moumouvirus	31.7	3.8e-61
WP_002362877.1|1754335_1755535_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002382785.1|1755573_1756092_-	DUF5590 domain-containg protein	NA	NA	NA	NA	NA
WP_002362876.1|1756167_1758957_-	DEAD/DEAH box helicase family protein	NA	A0A127AW80	Bacillus_phage	26.2	2.1e-50
>prophage 116
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1762399	1771259	2937521	protease,tRNA	Clostridium_phage(33.33%)	4	NA	NA
WP_002381593.1|1762399_1766755_-	PolC-type DNA polymerase III	NA	A0A0A8WJ41	Clostridium_phage	40.3	3.0e-22
WP_002359769.1|1767005_1768724_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	23.5	2.6e-06
WP_002362168.1|1768795_1770064_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_002404124.1|1770479_1771259_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.7	6.0e-19
>prophage 117
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1778815	1781866	2937521		Bacillus_phage(50.0%)	2	NA	NA
WP_002404119.1|1778815_1781107_+	lasso peptide biosynthesis B2 protein	NA	W8CYL7	Bacillus_phage	30.6	8.7e-58
WP_002378542.1|1781158_1781866_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.9	4.8e-31
>prophage 118
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1784935	1801634	2937521	integrase	Streptococcus_phage(25.0%)	18	1785960:1785974	1797448:1797462
WP_002354535.1|1784935_1785367_+	very short patch repair endonuclease	NA	V5UTF4	Oenococcus_phage	55.9	8.2e-34
WP_002354533.1|1785380_1786859_-	type II restriction endonuclease Sau3AI	NA	NA	NA	NA	NA
1785960:1785974	attL	TTTTTCAAATTCTTC	NA	NA	NA	NA
WP_142426519.1|1787069_1788359_+	DNA (cytosine-5-)-methyltransferase	NA	C5IUI7	Streptococcus_phage	33.0	2.5e-22
WP_025188153.1|1788852_1789635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010784189.1|1789699_1789837_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029682452.1|1790323_1790650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025188152.1|1790695_1791058_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_002404111.1|1791094_1791310_-	helix-turn-helix transcriptional regulator	NA	A0A139ZPI6	Marinitoga_camini_virus	40.0	1.4e-05
WP_002354523.1|1791438_1791774_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_025188151.1|1791849_1793847_-	hypothetical protein	NA	A0A1Z1LZK7	Bacillus_phage	24.3	3.9e-22
WP_002287723.1|1793944_1794220_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002287709.1|1794452_1795187_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002301919.1|1795225_1796368_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	34.5	7.4e-58
WP_002356769.1|1796463_1797858_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
1797448:1797462	attR	TTTTTCAAATTCTTC	NA	NA	NA	NA
WP_002356768.1|1797876_1798344_-	SUF system NifU family Fe-S cluster assembly protein	NA	V5R992	Mycobacterium_phage	36.6	2.7e-14
WP_171803586.1|1798330_1799563_-	SufS family cysteine desulfurase	NA	Q2XUY6	environmental_halophage	47.8	3.0e-113
WP_002362713.1|1799562_1800849_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_002356763.1|1800863_1801634_-	Fe-S cluster assembly ATPase SufC	NA	A0A1M7XV31	Cedratvirus	26.3	4.7e-08
>prophage 119
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1818079	1819686	2937521		Rhizobium_phage(50.0%)	2	NA	NA
WP_002356743.1|1818079_1819102_-	PhoH family protein	NA	L7TP00	Rhizobium_phage	48.3	6.2e-48
WP_002356741.1|1819236_1819686_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	37.4	1.2e-16
>prophage 120
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1825181	1827794	2937521		Streptococcus_phage(100.0%)	2	NA	NA
WP_142426517.1|1825181_1825964_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	35.8	2.1e-35
WP_002356727.1|1826069_1827794_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	61.3	2.6e-203
>prophage 121
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1831019	1831997	2937521		Bacillus_virus(100.0%)	1	NA	NA
WP_002362677.1|1831019_1831997_-	GMP reductase	NA	G3MBI2	Bacillus_virus	79.8	5.1e-148
>prophage 122
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1835077	1835704	2937521		Streptococcus_phage(100.0%)	1	NA	NA
WP_002356716.1|1835077_1835704_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	50.5	4.3e-52
>prophage 123
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1848414	1853628	2937521		Clostridium_botulinum_C_phage(33.33%)	5	NA	NA
WP_002362654.1|1848414_1850679_-	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	37.8	7.6e-38
WP_002378554.1|1850713_1851217_-	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	55.8	1.5e-34
WP_002404101.1|1851339_1852017_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002404100.1|1852079_1853150_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_002356693.1|1853136_1853628_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	35.6	4.8e-22
>prophage 124
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1861399	1867919	2937521		Streptococcus_phage(66.67%)	5	NA	NA
WP_002381558.1|1861399_1863169_-	DNA helicase RecQ	NA	M1PGQ0	Moumouvirus	39.9	1.0e-77
WP_002356682.1|1863486_1865322_-	translational GTPase TypA	NA	A0A1S5SF82	Streptococcus_phage	36.1	1.6e-17
WP_002362645.1|1865542_1866325_-	inositol monophosphatase family protein	NA	NA	NA	NA	NA
WP_002356679.1|1866325_1866604_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_002404095.1|1866653_1867919_-	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	34.1	3.6e-45
>prophage 125
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1873488	1878065	2937521	tRNA	Lactococcus_phage(25.0%)	5	NA	NA
WP_002356669.1|1873488_1873842_-	hypothetical protein	NA	A0A1P8BLF6	Lactococcus_phage	52.0	5.9e-14
WP_002362641.1|1873939_1874272_+	helix-turn-helix transcriptional regulator	NA	D7RWL5	Brochothrix_phage	61.2	3.7e-26
WP_002356666.1|1874353_1874854_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_002359703.1|1875009_1876701_-|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	34.1	2.4e-76
WP_002362640.1|1877018_1878065_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.8	7.5e-57
>prophage 126
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1895574	1898073	2937521		Catovirus(100.0%)	1	NA	NA
WP_142426516.1|1895574_1898073_-	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	29.9	3.4e-07
>prophage 127
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1902066	1906873	2937521		Flavobacterium_phage(33.33%)	6	NA	NA
WP_002362225.1|1902066_1902882_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.4	2.1e-22
WP_002359679.1|1903229_1904048_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002362617.1|1904062_1904749_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002356639.1|1904741_1905779_-	methionine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.2	7.8e-30
WP_002359677.1|1906193_1906517_-	glycine cleavage system protein H	NA	NA	NA	NA	NA
WP_002356637.1|1906513_1906873_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	56.0	3.9e-29
>prophage 128
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1920541	1927161	2937521		Aeromonas_phage(25.0%)	6	NA	NA
WP_002362609.1|1920541_1921780_-	serine hydroxymethyltransferase	NA	A0A219YB23	Aeromonas_phage	54.7	1.7e-103
WP_174776056.1|1921855_1922878_-	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	38.2	3.8e-53
WP_002362606.1|1922921_1923755_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_002356619.1|1923747_1924821_-	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_002356618.1|1924832_1925417_-	thymidine kinase	NA	E0YIP8	Lactococcus_phage	52.6	9.4e-49
WP_002356617.1|1925643_1927161_-	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	31.3	2.4e-56
>prophage 129
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1940755	1946226	2937521		Acinetobacter_phage(50.0%)	4	NA	NA
WP_002362593.1|1940755_1943329_-	selenium-dependent xanthine dehydrogenase	NA	A0A0P0I429	Acinetobacter_phage	25.4	8.9e-51
WP_002362591.1|1943449_1944457_-	XdhC family protein	NA	NA	NA	NA	NA
WP_002356595.1|1944453_1944813_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002356594.1|1944906_1946226_-	purine permease	NA	Q9KX94	Enterobacteria_phage	28.8	3.4e-22
>prophage 130
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1965755	1972391	2937521		Bacillus_phage(66.67%)	5	NA	NA
WP_002362577.1|1965755_1967624_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.6	2.5e-63
WP_002356575.1|1967620_1969348_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.5	1.2e-51
WP_002404060.1|1969368_1970046_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002367148.1|1970193_1970763_-	guanylate kinase	NA	NA	NA	NA	NA
WP_002362575.1|1970945_1972391_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	24.9	5.4e-29
>prophage 131
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	1986901	2007990	2937521	protease	Bacillus_virus(30.0%)	21	NA	NA
WP_002356550.1|1986901_1987366_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	62.7	6.3e-48
WP_002404062.1|1987378_1989748_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	43.2	1.4e-98
WP_002389815.1|1989747_1990521_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_002356546.1|1990666_1990903_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_002356545.1|1991070_1991346_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_002362567.1|1991335_1991620_-	(4Fe-4S)-binding protein	NA	NA	NA	NA	NA
WP_002362565.1|1991711_1993541_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	32.2	4.8e-75
WP_002356540.1|1993708_1994536_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	55.3	1.2e-73
WP_002356538.1|1994538_1996023_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	44.9	8.6e-107
WP_002356537.1|1996100_1996511_-	GtrA family protein	NA	NA	NA	NA	NA
WP_002362563.1|1996729_1998277_-	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXE4	Bacillus_phage	39.1	7.8e-18
WP_002362562.1|1998293_1999004_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002362560.1|1999027_1999747_-	winged-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002362559.1|2000049_2001675_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	55.3	1.8e-153
WP_002356531.1|2001732_2002017_-	co-chaperone GroES	NA	A0A221S328	uncultured_virus	44.1	3.6e-14
WP_002356530.1|2002249_2002426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002356529.1|2002444_2003098_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002356528.1|2003140_2003791_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_002362558.1|2004004_2005951_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	32.2	2.4e-56
WP_002356525.1|2005965_2006598_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002388977.1|2006799_2007990_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.4	1.1e-27
>prophage 132
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2013009	2014158	2937521		Streptococcus_phage(100.0%)	1	NA	NA
WP_002356517.1|2013009_2014158_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	36.7	6.8e-43
>prophage 133
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2018320	2029937	2937521		Mycoplasma_phage(33.33%)	11	NA	NA
WP_002356510.1|2018320_2019127_-	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	24.5	4.3e-12
WP_002356508.1|2019145_2020231_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	42.6	7.6e-36
WP_002356507.1|2020256_2020799_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002356506.1|2021062_2022055_+	YhdH/YhfP family quinone oxidoreductase	NA	NA	NA	NA	NA
WP_002359575.1|2022070_2022844_+	phosphopantothenate--cysteine ligase	NA	Q9HH70	Methanothermobacter_phage	31.0	3.4e-14
WP_002359573.1|2022840_2023395_+	phosphopantothenoylcysteine decarboxylase	NA	Q9J5A8	Fowlpox_virus	38.9	8.1e-26
WP_002356501.1|2023398_2024034_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_002384107.1|2024089_2025295_-	aminoacyltransferase	NA	NA	NA	NA	NA
WP_002356499.1|2025532_2026039_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	28.4	8.5e-06
WP_002356498.1|2026301_2027261_+	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA	NA
WP_002404066.1|2027327_2029937_-	ATP-dependent RecD-like DNA helicase	NA	A0A1P8DII4	Virus_Rctr197k	35.2	1.4e-38
>prophage 134
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2038924	2039620	2937521		Bacillus_phage(100.0%)	1	NA	NA
WP_002385714.1|2038924_2039620_-	helix-turn-helix transcriptional regulator	NA	A0A0A7AQV8	Bacillus_phage	44.2	8.9e-06
>prophage 135
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2045776	2047492	2937521		Bacillus_phage(100.0%)	1	NA	NA
WP_002394119.1|2045776_2047492_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.9	1.1e-57
>prophage 136
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2054975	2058173	2937521		Gordonia_phage(100.0%)	1	NA	NA
WP_002404069.1|2054975_2058173_-	SNF2 helicase associated domain-containing protein	NA	A0A160DDK8	Gordonia_phage	26.7	1.3e-35
>prophage 137
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2067217	2087463	2937521		Streptococcus_phage(28.57%)	18	NA	NA
WP_002362533.1|2067217_2068405_+	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.2	1.7e-36
WP_002384084.1|2068549_2069389_+	NUDIX hydrolase	NA	G3MA14	Bacillus_virus	29.7	3.0e-24
WP_002362532.1|2069405_2069930_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002356444.1|2069974_2070460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002356443.1|2070597_2071722_-	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	34.8	5.3e-24
WP_002362531.1|2071902_2073087_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_002359467.1|2073076_2073877_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_002404071.1|2074008_2075379_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	38.5	5.2e-90
WP_002356434.1|2075585_2075834_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_002404072.1|2076013_2079136_-	beta-galactosidase subunit alpha	NA	L0N6M2	Herpes_simplex_virus	32.5	1.0e-146
WP_002356430.1|2079068_2080568_-	amino acid permease	NA	NA	NA	NA	NA
WP_002356429.1|2080716_2081547_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_002356428.1|2081741_2083244_+	glucosyltransferase domain-containing protein	NA	C9E2L4	Enterococcus_phage	97.8	8.6e-272
WP_002356427.1|2083366_2083735_-	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_002356426.1|2083797_2084298_-	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_002356425.1|2084620_2085310_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_002356424.1|2085421_2085844_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_002365053.1|2085966_2087463_-	ABC-F type ribosomal protection protein Lsa(A)	NA	A0A1B0RXA0	Streptococcus_phage	27.0	6.1e-28
>prophage 138
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2094945	2095491	2937521		Bacillus_virus(100.0%)	1	NA	NA
WP_002384070.1|2094945_2095491_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	31.3	1.2e-10
>prophage 139
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2100786	2104603	2937521		Cafeteria_roenbergensis_virus(33.33%)	4	NA	NA
WP_002365059.1|2100786_2101542_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	46.7	2.7e-56
WP_002356400.1|2101576_2102110_+	exonuclease	NA	M1PFD8	Streptococcus_phage	36.5	1.4e-22
WP_002356399.1|2102230_2102821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362507.1|2102920_2104603_-	FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	37.8	8.1e-53
>prophage 140
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2112381	2132127	2937521		Streptococcus_phage(36.36%)	20	NA	NA
WP_002372329.1|2112381_2113587_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	30.9	4.8e-23
WP_002365063.1|2113583_2115104_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	27.5	2.9e-41
WP_002356384.1|2115118_2115268_-	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_002384061.1|2115471_2117568_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002356382.1|2117557_2118325_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.2	4.4e-30
WP_002385686.1|2118730_2120914_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.8	3.1e-286
WP_002365065.1|2120946_2121543_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	56.1	2.3e-50
WP_002362328.1|2121587_2122706_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002365066.1|2122831_2123590_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_002356375.1|2123573_2124236_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.1	6.7e-19
WP_002356373.1|2124250_2125123_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	57.6	6.2e-81
WP_002356372.1|2125234_2125582_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	36.7	8.1e-16
WP_002356371.1|2125574_2126414_-	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002384059.1|2126530_2127481_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	33.0	6.2e-34
WP_002356367.1|2127482_2127812_-	cyclic-di-AMP receptor	NA	NA	NA	NA	NA
WP_002356366.1|2127831_2128470_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	53.8	2.1e-54
WP_002356363.1|2128678_2129275_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_002356360.1|2129450_2130113_-	thiaminase II	NA	NA	NA	NA	NA
WP_002359432.1|2130124_2130778_-	cobalt ABC transporter permease	NA	NA	NA	NA	NA
WP_002365067.1|2130768_2132127_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	28.2	1.0e-13
>prophage 141
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2140665	2144721	2937521		Streptococcus_virus(50.0%)	3	NA	NA
WP_002356340.1|2140665_2142426_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	43.0	1.5e-54
WP_002380784.1|2142497_2143748_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_002379784.1|2143728_2144721_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	36.8	1.4e-52
>prophage 142
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2153732	2154866	2937521		Enterococcus_phage(100.0%)	1	NA	NA
WP_002392337.1|2153732_2154866_+	DUF4950 domain-containing protein	NA	C9E2L5	Enterococcus_phage	51.5	1.0e-19
>prophage 143
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2159549	2167354	2937521	tRNA	Bacillus_phage(50.0%)	7	NA	NA
WP_174776054.1|2159549_2161487_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.3	1.8e-112
WP_002356318.1|2161883_2162063_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_002356314.1|2162181_2162892_-	M15 family metallopeptidase	NA	NA	NA	NA	NA
WP_002365141.1|2162989_2164102_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	27.8	8.9e-24
WP_002356311.1|2164094_2164799_-	VanR-ABDEGLN family response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.2	6.4e-36
WP_002365142.1|2164898_2166344_-	peptidoglycan binding domain-containing protein	NA	NA	NA	NA	NA
WP_002365143.1|2166490_2167354_-	aminoglycoside 6-adenylyltransferase	NA	A0A1X9I6F2	Streptococcus_phage	41.1	1.3e-59
>prophage 144
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2182402	2183140	2937521		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_002356283.1|2182402_2183140_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	32.0	1.6e-21
>prophage 145
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2199329	2201135	2937521		Bodo_saltans_virus(50.0%)	2	NA	NA
WP_002355150.1|2199329_2199920_-	peptidylprolyl isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	41.6	3.3e-25
WP_002355149.1|2200124_2201135_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	50.0	8.9e-31
>prophage 146
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2208236	2228497	2937521	integrase	Streptococcus_phage(89.47%)	20	2198054:2198068	2231110:2231124
2198054:2198068	attL	AAAAGAAGAAATTTT	NA	NA	NA	NA
WP_002385276.1|2208236_2209370_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.9	5.7e-26
WP_000420682.1|2209767_2210082_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|2210097_2210484_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|2210512_2211898_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|2211900_2212053_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|2212075_2213281_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|2213323_2213545_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|2213661_2214159_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|2214133_2214640_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_142426620.1|2214623_2217071_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	99.9	0.0e+00
WP_000769868.1|2219247_2220249_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224319.1|2220245_2221178_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_000691727.1|2221558_2223478_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	100.0	0.0e+00
WP_000336323.1|2223596_2223764_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_001227347.1|2223823_2224177_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000804885.1|2224681_2225104_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|2225100_2225331_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|2225791_2225995_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|2226076_2227294_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_002365181.1|2227558_2228497_-	glycosyltransferase family 2 protein	NA	V5USA4	Oenococcus_phage	50.5	1.1e-78
2231110:2231124	attR	AAAATTTCTTCTTTT	NA	NA	NA	NA
>prophage 147
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2235527	2244046	2937521		Bacillus_phage(50.0%)	8	NA	NA
WP_002387311.1|2235527_2236679_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A167RG65	Powai_lake_megavirus	29.5	3.0e-30
WP_002355129.1|2236692_2237184_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_142426619.1|2237426_2239196_-	multidrug efflux ABC transporter subunit EfrB	NA	W8CYL7	Bacillus_phage	30.2	5.3e-55
WP_002389280.1|2239192_2240920_-	multidrug efflux ABC transporter subunit EfrA	NA	W8CYL7	Bacillus_phage	28.8	4.9e-45
WP_002365187.1|2241148_2241535_+	YbaN family protein	NA	NA	NA	NA	NA
WP_002355123.1|2241840_2242053_+	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_002355122.1|2242054_2243740_+	ribonuclease J	NA	NA	NA	NA	NA
WP_002355121.1|2243845_2244046_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.2	5.3e-20
>prophage 148
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2249724	2253012	2937521	tRNA	Streptococcus_phage(50.0%)	2	NA	NA
WP_002355114.1|2249724_2250324_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	36.9	7.7e-22
WP_002355112.1|2250369_2253012_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	42.8	1.7e-161
>prophage 149
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2256105	2258918	2937521		Moraxella_phage(50.0%)	3	NA	NA
WP_002355107.1|2256105_2257419_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	32.7	5.7e-46
WP_002359155.1|2257599_2258337_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002355105.1|2258336_2258918_-	acetyltransferase	NA	M1HKK6	Paramecium_bursaria_Chlorella_virus	50.9	7.5e-06
>prophage 150
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2273964	2275986	2937521		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_002399157.1|2273964_2275986_-	DNA mismatch repair protein MutS	NA	F2Y0V3	Organic_Lake_phycodnavirus	21.9	3.4e-13
>prophage 151
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2288020	2288695	2937521		Planktothrix_phage(100.0%)	1	NA	NA
WP_002365285.1|2288020_2288695_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	2.2e-33
>prophage 152
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2306775	2314376	2937521	integrase	Acanthocystis_turfacea_Chlorella_virus(33.33%)	7	2309952:2309973	2312710:2312731
WP_142428094.1|2306775_2307843_+	linear amide C-N hydrolase	NA	M1H9I8	Acanthocystis_turfacea_Chlorella_virus	27.1	2.8e-19
WP_002365296.1|2307894_2308551_-	G6PD family protein	NA	NA	NA	NA	NA
WP_002403442.1|2308575_2309784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_142428625.1|2309895_2310519_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
2309952:2309973	attL	TTGGGAACTGTGTAAGTTGGGA	NA	NA	NA	NA
WP_002365301.1|2310556_2311486_-|integrase	site-specific integrase	integrase	A8ATM2	Listeria_phage	46.8	1.2e-79
WP_010784804.1|2311569_2312787_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
2312710:2312731	attR	TCCCAACTTACACAGTTCCCAA	NA	NA	NA	NA
WP_002365303.1|2312783_2314376_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	41.0	2.9e-100
>prophage 153
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2326883	2329436	2937521		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_002365312.1|2326883_2329436_-	cation-transporting P-type ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	28.8	2.7e-60
>prophage 154
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2338093	2344761	2937521		Clostridium_phage(50.0%)	3	NA	NA
WP_080265843.1|2338093_2341999_-	FIVAR domain-containing protein	NA	A0A1L2BYA9	Clostridium_phage	36.2	8.6e-05
WP_002355021.1|2342582_2343062_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_002404032.1|2343438_2344761_+	trypsin-like peptidase domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	29.1	1.4e-20
>prophage 155
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2370282	2370846	2937521		Synechococcus_phage(100.0%)	1	NA	NA
WP_002354981.1|2370282_2370846_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.1	1.6e-13
>prophage 156
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2391433	2394095	2937521		Brazilian_cedratvirus(50.0%)	3	NA	NA
WP_002354962.1|2391433_2392189_-	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.4	5.1e-15
WP_002354961.1|2392185_2393151_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_174776051.1|2393147_2394095_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	43.4	4.9e-71
>prophage 157
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2400593	2401079	2937521		Pandoravirus(100.0%)	1	NA	NA
WP_002381091.1|2400593_2401079_-	cupin domain-containing protein	NA	A0A291ATU0	Pandoravirus	36.2	5.6e-15
>prophage 158
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2407157	2407850	2937521		Acanthamoeba_polyphaga_lentillevirus(100.0%)	1	NA	NA
WP_010784656.1|2407157_2407850_-	ribonuclease III	NA	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	31.7	9.8e-29
>prophage 159
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2411899	2413884	2937521		Bacillus_virus(100.0%)	2	NA	NA
WP_002354942.1|2411899_2412844_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.6	2.1e-21
WP_002367425.1|2412843_2413884_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.3	4.0e-18
>prophage 160
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2423624	2424533	2937521		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002392686.1|2423624_2424533_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.7	3.9e-25
>prophage 161
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2427551	2436804	2937521	tRNA	Lausannevirus(25.0%)	8	NA	NA
WP_002404016.1|2427551_2429708_-	serine/threonine protein kinase IreK	NA	F2WL08	Lausannevirus	29.7	4.4e-19
WP_002404015.1|2429704_2430454_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
WP_002404014.1|2430455_2431835_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_002368448.1|2431840_2432782_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	31.0	1.1e-09
WP_002389420.1|2432774_2433269_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	41.1	1.2e-15
WP_002380962.1|2433295_2435728_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_002354916.1|2435882_2436185_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_002354915.1|2436189_2436804_-	guanylate kinase	NA	A0A0M5KCK5	Mollivirus	33.6	4.8e-11
>prophage 162
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2446669	2448619	2937521		Only_Syngen_Nebraska_virus(50.0%)	2	NA	NA
WP_002375530.1|2446669_2447671_-	2-hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	26.8	1.6e-19
WP_002378821.1|2447683_2448619_-	decarboxylating 6-phosphogluconate dehydrogenase	NA	M4QGJ9	Cyanophage	34.3	1.1e-51
>prophage 163
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2458821	2462625	2937521		Streptococcus_phage(50.0%)	4	NA	NA
WP_002354884.1|2458821_2460090_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	36.0	2.6e-67
WP_002354883.1|2460298_2460748_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_002394745.1|2460793_2461498_-	WxL domain-containing protein	NA	NA	NA	NA	NA
WP_002354877.1|2461911_2462625_-	trehalose operon repressor	NA	A0A291LID1	Streptomyces_phage	42.2	3.1e-06
>prophage 164
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2468685	2475721	2937521		Hokovirus(33.33%)	5	NA	NA
WP_002381060.1|2468685_2469657_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	32.0	1.7e-42
WP_002354871.1|2469831_2470269_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_002354869.1|2470401_2470956_-	septum formation protein Maf	NA	NA	NA	NA	NA
WP_142426554.1|2470980_2473113_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	38.3	1.6e-53
WP_002380978.1|2473144_2475721_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	26.1	3.5e-39
>prophage 165
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2479090	2480137	2937521		Bacillus_phage(100.0%)	1	NA	NA
WP_002354860.1|2479090_2480137_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	66.1	1.4e-127
>prophage 166
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2499586	2553648	2937521	holin,integrase,tRNA	Streptococcus_phage(25.0%)	50	2521970:2521986	2562420:2562436
WP_002392705.1|2499586_2500600_-	alpha/beta hydrolase	NA	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	22.6	3.9e-10
WP_002404002.1|2500754_2501300_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_002354830.1|2501511_2502195_-|holin	antiholin-like protein LrgB	holin	NA	NA	NA	NA
WP_002354829.1|2502191_2502611_-|holin	antiholin-like murein hydrolase modulator LrgA	holin	NA	NA	NA	NA
WP_002354828.1|2502762_2503491_-	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002392707.1|2503471_2505220_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	28.4	4.2e-60
WP_002354826.1|2505332_2506151_-	membrane protein	NA	NA	NA	NA	NA
WP_002354825.1|2506163_2506835_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002354824.1|2506831_2507554_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	27.5	5.6e-19
WP_002392708.1|2507915_2508314_-	OsmC family protein	NA	NA	NA	NA	NA
WP_002354822.1|2508514_2508784_+	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_002354818.1|2508894_2509044_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002404001.1|2509059_2510034_+	GTP-binding protein	NA	NA	NA	NA	NA
WP_002383181.1|2510067_2510190_+	putative metal homeostasis protein	NA	NA	NA	NA	NA
WP_002404000.1|2510210_2511746_+	zinc ABC transporter substrate-binding protein AdcA	NA	NA	NA	NA	NA
WP_002413934.1|2511803_2512778_-|tRNA	tRNA-dihydrouridine synthase	tRNA	NA	NA	NA	NA
WP_002354811.1|2512965_2513736_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002354809.1|2513728_2514664_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.4	2.4e-22
WP_002354802.1|2514921_2515341_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002354800.1|2515353_2515845_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002365419.1|2515861_2516677_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA	NA
WP_002354796.1|2516673_2517501_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002381047.1|2517648_2520168_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA	NA
WP_002403998.1|2520222_2521809_-	CHAP domain-containing protein	NA	NA	NA	NA	NA
2521970:2521986	attL	ACCGCATTTTTCAACTC	NA	NA	NA	NA
WP_002354788.1|2522954_2523515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002413312.1|2523704_2526686_-	alkaline phosphatase family protein	NA	NA	NA	NA	NA
WP_002372037.1|2527414_2527822_-	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	48.9	3.6e-31
WP_002372035.1|2528179_2528539_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002372033.1|2528535_2530653_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	64.6	5.7e-245
WP_002403997.1|2530873_2531686_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002403996.1|2531847_2533104_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	30.8	2.0e-48
WP_002403995.1|2533193_2533391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002403994.1|2533496_2534546_+|integrase	site-specific integrase	integrase	Q4ZC42	Staphylococcus_virus	27.6	7.4e-20
WP_002354786.1|2534602_2534995_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_174776049.1|2535008_2535452_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_002354782.1|2535673_2536141_-	DNA starvation/stationary phase protection protein	NA	C1KFH1	Lactobacillus_virus	25.9	1.0e-05
WP_002354781.1|2536269_2536989_-	DUF5105 domain-containing protein	NA	NA	NA	NA	NA
WP_002354779.1|2537072_2538593_-	gluconokinase	NA	NA	NA	NA	NA
WP_002354778.1|2538701_2539394_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_002354777.1|2539442_2543096_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.8	1.4e-65
WP_002389470.1|2543262_2546877_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.5	2.0e-48
WP_002354774.1|2547247_2547589_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SAB3	Streptococcus_phage	42.5	5.5e-17
WP_002354773.1|2547588_2547819_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002354768.1|2547993_2548209_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_142426550.1|2548347_2549340_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_002354763.1|2549603_2550233_-	lytic polysaccharide monooxygenase	NA	NA	NA	NA	NA
WP_002381036.1|2550925_2552542_+	phosphatase PAP2/LCP family protein	NA	NA	NA	NA	NA
WP_002392818.1|2552871_2553015_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_073340360.1|2553133_2553274_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_002381035.1|2553504_2553648_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
2562420:2562436	attR	ACCGCATTTTTCAACTC	NA	NA	NA	NA
>prophage 167
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2575018	2581004	2937521		Pandoravirus(50.0%)	8	NA	NA
WP_002385125.1|2575018_2575810_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.8	5.4e-23
WP_002354736.1|2575802_2576396_-	non-canonical purine NTP pyrophosphatase	NA	A0A1K0ISQ7	Cassava_brown_streak_virus	34.3	1.5e-09
WP_002383148.1|2576399_2576969_-	GTP cyclohydrolase I FolE	NA	S4VV34	Pandoravirus	49.1	2.0e-32
WP_002354734.1|2576962_2577448_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_002354733.1|2577448_2577811_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_002354732.1|2578008_2579358_-	glutathione-disulfide reductase	NA	NA	NA	NA	NA
WP_002354731.1|2579443_2579842_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002370166.1|2579864_2581004_-	ImmA/IrrE family metallo-endopeptidase	NA	B6SBZ6	Clostridium_virus	33.2	5.1e-43
>prophage 168
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2588119	2594158	2937521	protease	Phage_TP(50.0%)	4	NA	NA
WP_002403462.1|2588119_2589367_-	U32 family peptidase	NA	Q6DW11	Phage_TP	33.9	3.3e-43
WP_002354722.1|2589394_2590315_-	U32 family peptidase	NA	NA	NA	NA	NA
WP_002354721.1|2590494_2591529_-	FUSC family protein	NA	NA	NA	NA	NA
WP_002354718.1|2591662_2594158_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A0A8J958	Klebsiella_phage	39.5	1.9e-127
>prophage 169
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2604728	2609845	2937521	tRNA	Bacillus_phage(50.0%)	4	NA	NA
WP_002404166.1|2604728_2605418_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	38.5	1.6e-39
WP_002363566.1|2605407_2606589_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	27.5	7.7e-26
WP_002355965.1|2606923_2608195_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.6	3.9e-92
WP_002355966.1|2608363_2609845_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.1	1.6e-97
>prophage 170
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2614124	2615769	2937521		Bifidobacterium_phage(50.0%)	2	NA	NA
WP_002355975.1|2614124_2615015_-	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	32.9	5.5e-16
WP_002355976.1|2615007_2615769_-	ParA family protein	NA	Q8JL10	Natrialba_phage	32.3	3.7e-29
>prophage 171
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2620266	2620944	2937521		Cyanophage(100.0%)	1	NA	NA
WP_002355980.1|2620266_2620944_-	fructose-6-phosphate aldolase	NA	M4SIN4	Cyanophage	31.5	1.8e-19
>prophage 172
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2625277	2626078	2937521		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_002355987.1|2625277_2626078_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.2	7.9e-06
>prophage 173
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2653328	2661989	2937521		Bacillus_virus(50.0%)	7	NA	NA
WP_002356014.1|2653328_2654459_+	DNA polymerase III subunit beta	NA	A0A0A8IL17	Aurantimonas_phage	26.1	7.6e-31
WP_002356015.1|2655038_2655284_+	S4 domain-containing protein YaaA	NA	NA	NA	NA	NA
WP_002397722.1|2655270_2656398_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_002359210.1|2656394_2658344_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.0	7.0e-141
WP_002361457.1|2658399_2660901_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	34.1	8.5e-99
WP_002356019.1|2661075_2661378_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_002364599.1|2661422_2661989_+	single-stranded DNA-binding protein	NA	A0A097PAQ3	Streptococcus_pyogenes_phage	73.0	1.4e-44
>prophage 174
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2665168	2670730	2937521		Streptococcus_phage(25.0%)	4	NA	NA
WP_002381331.1|2665168_2666536_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	57.1	1.5e-134
WP_002359213.1|2666772_2668065_+	adenylosuccinate synthase	NA	G5CQQ4	Megavirus	35.7	3.1e-68
WP_002359214.1|2668189_2669059_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	31.4	1.1e-13
WP_002359215.1|2669098_2670730_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	26.6	6.9e-49
>prophage 175
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2693975	2696836	2937521		Streptococcus_phage(66.67%)	3	NA	NA
WP_174776047.1|2693975_2695229_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	57.5	2.6e-120
WP_002356048.1|2695215_2696067_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.9	4.4e-47
WP_002356049.1|2696350_2696836_+	dUTP diphosphatase	NA	A0A249XZY3	Enterococcus_phage	68.9	8.9e-37
>prophage 176
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2702334	2703747	2937521	tRNA	Catovirus(100.0%)	1	NA	NA
WP_002356055.1|2702334_2703747_+|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	30.4	4.7e-54
>prophage 177
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2708723	2712969	2937521		Anomala_cuprea_entomopoxvirus(33.33%)	4	NA	NA
WP_002356064.1|2708723_2709416_+	metal ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	31.6	3.0e-14
WP_002383493.1|2709577_2710417_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_002381336.1|2710560_2711382_+	pur operon repressor	NA	A0A1V0SKE5	Klosneuvirus	26.4	3.6e-06
WP_002381338.1|2711592_2712969_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7P8	Chrysochromulina_ericina_virus	34.6	9.3e-31
>prophage 178
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2721369	2722386	2937521		uncultured_virus(100.0%)	1	NA	NA
WP_002381340.1|2721369_2722386_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	30.8	3.1e-07
>prophage 179
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2728809	2729703	2937521		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_002359245.1|2728809_2729703_+	SDR family oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	44.6	7.6e-58
>prophage 180
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2755503	2757762	2937521	tRNA	uncultured_Mediterranean_phage(50.0%)	2	NA	NA
WP_002361511.1|2755503_2756775_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.3	2.7e-93
WP_002403941.1|2756811_2757762_-	alpha/beta hydrolase	NA	Q9DHU9	Yaba-like_disease_virus	27.0	4.5e-16
>prophage 181
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2766209	2767226	2937521		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_002403945.1|2766209_2767226_+	NADP-dependent oxidoreductase	NA	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	26.6	3.1e-07
>prophage 182
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2776474	2778037	2937521		Hokovirus(100.0%)	1	NA	NA
WP_002356158.1|2776474_2778037_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	29.5	6.0e-18
>prophage 183
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2782990	2784292	2937521		Geobacillus_virus(100.0%)	1	NA	NA
WP_002356165.1|2782990_2784292_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.7	8.9e-124
>prophage 184
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2787928	2789497	2937521		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002414879.1|2787928_2789497_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.7	1.0e-20
>prophage 185
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2793928	2798493	2937521		Grouper_iridovirus(33.33%)	5	NA	NA
WP_002356180.1|2793928_2794747_+	purine-nucleoside phosphorylase	NA	Q5YBA4	Grouper_iridovirus	41.4	1.8e-53
WP_002359338.1|2794764_2795472_+	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_002361532.1|2795510_2796449_-	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002363473.1|2796679_2797486_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.5	2.5e-15
WP_002363472.1|2797482_2798493_+	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.9	2.9e-21
>prophage 186
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2801727	2810254	2937521		Enterobacteria_phage(33.33%)	8	NA	NA
WP_002363469.1|2801727_2802303_-	recombinase family protein	NA	Q1MVM2	Enterobacteria_phage	37.5	2.8e-21
WP_002363468.1|2802344_2803025_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_002356190.1|2803369_2803783_+	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_002356191.1|2803838_2804309_+	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_002356192.1|2804392_2806474_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	29.1	7.2e-67
WP_002356194.1|2806624_2807812_+	elongation factor Tu	NA	NA	NA	NA	NA
WP_002403952.1|2807992_2808817_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_002414585.1|2809087_2810254_+	class I SAM-dependent methyltransferase	NA	A0A2K9L0U7	Tupanvirus	33.9	2.7e-47
>prophage 187
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2827711	2829396	2937521		Planktothrix_phage(50.0%)	2	NA	NA
WP_002359354.1|2827711_2828551_+	energy-coupling factor ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.1	2.4e-21
WP_002381364.1|2828526_2829396_+	energy-coupling factor ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	33.3	1.6e-15
>prophage 188
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2833563	2834933	2937521		Enterococcus_phage(50.0%)	2	NA	NA
WP_002383869.1|2833563_2834148_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	33.5	9.4e-17
WP_002356242.1|2834192_2834933_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.6	6.5e-31
>prophage 189
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2839869	2841381	2937521		Bacillus_phage(100.0%)	1	NA	NA
WP_002363447.1|2839869_2841381_+	glucosaminidase domain-containing protein	NA	Q9ZXE4	Bacillus_phage	45.8	3.6e-20
>prophage 190
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2851938	2859905	2937521	tRNA	Phaeocystis_globosa_virus(25.0%)	6	NA	NA
WP_002403962.1|2851938_2853432_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	R4TVK3	Phaeocystis_globosa_virus	25.4	1.1e-13
WP_002356260.1|2853450_2853996_+	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	27.7	6.3e-07
WP_174776043.1|2854089_2856246_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	C7U047	Ostreococcus_tauri_virus	50.6	9.3e-110
WP_002359370.1|2856408_2857305_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_002356263.1|2857316_2858315_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_002403964.1|2858408_2859905_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9L3L6	Tupanvirus	38.6	7.6e-87
>prophage 191
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2876339	2878043	2937521		Streptococcus_phage(50.0%)	3	NA	NA
WP_002362939.1|2876339_2876831_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.0	4.2e-18
WP_002355189.1|2876843_2877356_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_002355190.1|2877368_2878043_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	28.7	5.2e-11
>prophage 192
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2882531	2889030	2937521		Pandoravirus(50.0%)	7	NA	NA
WP_002386045.1|2882531_2883500_+	dihydroorotate oxidase	NA	A0A1V0SH91	Hokovirus	44.3	1.1e-57
WP_002355200.1|2883538_2884186_-	elongation factor G-binding protein	NA	NA	NA	NA	NA
WP_002355202.1|2884539_2885100_+	elongation factor P	NA	NA	NA	NA	NA
WP_002355203.1|2885268_2885406_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002361143.1|2885495_2886413_+	cysteine synthase family protein	NA	C3U2M1	Lactococcus_phage	40.5	5.4e-59
WP_002358342.1|2886426_2887563_+	cystathionine gamma-synthase	NA	A0A0B5JD48	Pandoravirus	28.0	1.6e-20
WP_002403701.1|2887599_2889030_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	26.0	1.8e-29
>prophage 193
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2895381	2897868	2937521		uncultured_virus(100.0%)	1	NA	NA
WP_002362947.1|2895381_2897868_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	34.4	6.3e-94
>prophage 194
NZ_CP046112	Enterococcus faecalis strain 111540027-2 chromosome, complete genome	2937521	2901458	2936962	2937521	portal,integrase,holin,tail,head	Enterococcus_phage(97.87%)	48	2900929:2900943	2911469:2911483
2900929:2900943	attL	AATGTAGAAATGGCT	NA	NA	NA	NA
WP_002379954.1|2901458_2902673_-|integrase	site-specific integrase	integrase	D2J023	Enterococcus_phage	100.0	1.2e-223
WP_010706904.1|2902828_2903359_-	hypothetical protein	NA	D2J024	Enterococcus_phage	100.0	1.7e-86
WP_010706903.1|2903394_2904072_-	ImmA/IrrE family metallo-endopeptidase	NA	D2J025	Enterococcus_phage	100.0	4.2e-125
WP_002379958.1|2904091_2904454_-	helix-turn-helix transcriptional regulator	NA	D2J026	Enterococcus_phage	100.0	5.8e-57
WP_002379959.1|2904561_2904792_+	helix-turn-helix transcriptional regulator	NA	D2J027	Enterococcus_phage	100.0	3.1e-32
WP_002379960.1|2904872_2905226_+	DUF1140 family protein	NA	D2J028	Enterococcus_phage	99.1	4.9e-61
WP_002379961.1|2905231_2905504_+	excisionase	NA	D2J029	Enterococcus_phage	100.0	1.7e-45
WP_002379962.1|2905507_2905702_+	hypothetical protein	NA	D2J030	Enterococcus_phage	100.0	1.1e-27
WP_002379963.1|2905716_2905917_+	hypothetical protein	NA	D2J031	Enterococcus_phage	100.0	7.9e-32
WP_002379964.1|2905913_2906096_+	hypothetical protein	NA	D2J032	Enterococcus_phage	100.0	7.2e-24
WP_002379965.1|2906096_2906291_+	hypothetical protein	NA	D2J033	Enterococcus_phage	100.0	6.7e-28
WP_002379966.1|2906402_2907083_+	DUF1642 domain-containing protein	NA	D2J034	Enterococcus_phage	100.0	3.3e-130
WP_002392906.1|2907126_2907309_+	hypothetical protein	NA	D2J035	Enterococcus_phage	100.0	9.1e-27
WP_002379969.1|2907295_2907775_+	hypothetical protein	NA	D2J036	Enterococcus_phage	100.0	8.2e-59
WP_002379970.1|2907777_2908950_+	DUF2800 domain-containing protein	NA	D2J037	Enterococcus_phage	100.0	4.0e-224
WP_002379971.1|2908955_2909198_+	hypothetical protein	NA	D2J038	Enterococcus_phage	100.0	4.9e-36
WP_010706762.1|2909213_2909543_+	hypothetical protein	NA	D2J039	Enterococcus_phage	100.0	1.4e-54
WP_033784734.1|2909569_2910145_+	DUF2815 family protein	NA	D2J040	Enterococcus_phage	97.9	3.9e-100
WP_002379974.1|2910178_2910421_+	hypothetical protein	NA	D2J041	Enterococcus_phage	87.8	1.8e-30
WP_033784735.1|2910407_2910956_+	hypothetical protein	NA	D2J042	Enterococcus_phage	98.4	5.2e-94
WP_142426603.1|2910952_2912914_+	DNA polymerase	NA	D2J043	Enterococcus_phage	98.0	0.0e+00
2911469:2911483	attR	AATGTAGAAATGGCT	NA	NA	NA	NA
WP_142426602.1|2912971_2913937_+	DNA (cytosine-5-)-methyltransferase	NA	D2IZY5	Enterococcus_phage	97.5	8.2e-183
WP_142426601.1|2914031_2916470_+	hypothetical protein	NA	D2J048	Enterococcus_phage	95.2	0.0e+00
WP_010830018.1|2916778_2917069_+	VRR-NUC domain-containing protein	NA	D2J049	Enterococcus_phage	72.9	1.0e-35
WP_010830019.1|2917086_2918448_+	DEAD/DEAH box helicase	NA	D2J050	Enterococcus_phage	98.9	3.6e-261
WP_010830020.1|2918453_2918867_+	hypothetical protein	NA	D2J051	Enterococcus_phage	97.1	3.6e-71
WP_010830021.1|2918953_2919727_+	HNH endonuclease	NA	A0A1X9I5J3	Streptococcus_phage	60.8	8.2e-85
WP_010830022.1|2919723_2920980_+	hypothetical protein	NA	D2J053	Enterococcus_phage	96.7	1.6e-234
WP_142426600.1|2920994_2922527_+|portal	phage portal protein	portal	D2J056	Enterococcus_phage	98.8	3.0e-288
WP_029656366.1|2922456_2923920_+	NAD+--arginine ADP-ribosyltransferase	NA	D2J057	Enterococcus_phage	96.7	1.9e-162
WP_002379990.1|2923912_2924116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002379992.1|2924173_2924473_+	hypothetical protein	NA	D2J059	Enterococcus_phage	99.0	1.1e-48
WP_002379994.1|2924609_2925182_+	phage scaffolding protein	NA	D2J060	Enterococcus_phage	94.7	5.1e-92
WP_002379996.1|2925197_2926061_+	hypothetical protein	NA	D2J061	Enterococcus_phage	99.0	7.6e-156
WP_010706754.1|2926363_2926897_+	hypothetical protein	NA	D2J063	Enterococcus_phage	98.9	7.4e-93
WP_002392896.1|2926896_2927235_+|head,tail	head-tail adaptor protein	head,tail	D2J064	Enterococcus_phage	100.0	1.0e-60
WP_002379999.1|2927221_2927653_+	HK97 gp10 family phage protein	NA	D2J065	Enterococcus_phage	99.3	1.1e-75
WP_002380000.1|2927656_2928040_+	hypothetical protein	NA	D2J066	Enterococcus_phage	100.0	2.2e-67
WP_002380001.1|2928026_2928986_+	fibronectin type III domain-containing protein	NA	D2J067	Enterococcus_phage	99.7	3.5e-178
WP_002380002.1|2929043_2929484_+	hypothetical protein	NA	D2J068	Enterococcus_phage	100.0	1.9e-70
WP_002392893.1|2929573_2929798_+	hypothetical protein	NA	D2J069	Enterococcus_phage	95.9	1.3e-30
WP_033784741.1|2929797_2932947_+|tail	tail protein	tail	D2J070	Enterococcus_phage	87.4	3.6e-264
WP_002403775.1|2932960_2933836_+|tail	phage tail family protein	tail	D2J071	Enterococcus_phage	96.6	3.2e-162
WP_002403776.1|2933835_2934918_+	siphovirus ReqiPepy6 Gp37-like family protein	NA	D2J072	Enterococcus_phage	92.2	4.2e-188
WP_002403777.1|2934934_2935942_+	hypothetical protein	NA	D2J073	Enterococcus_phage	94.6	4.2e-166
WP_002403778.1|2935942_2936482_+	hypothetical protein	NA	D2J074	Enterococcus_phage	47.7	4.7e-39
WP_010822870.1|2936498_2936753_+	hemolysin XhlA family protein	NA	D2IYY0	Enterococcus_phage	98.8	1.9e-38
WP_002403780.1|2936755_2936962_+|holin	phage holin	holin	D2IYY1	Enterococcus_phage	98.5	1.5e-30
