assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013343515.1_ASM1334351v1	NZ_CP050332	Pseudomonas aeruginosa strain DVT413 chromosome, complete genome	1	62167-62314	1	CRISPRCasFinder	no		csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	Orphan	GGAGGCTCCAGCGCAGACGCCGTAAGGAGGCTCCGCGATGCCTAGGCAAG	50	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	NA|134aa|up_4|NZ_CP050332.1_54050_54452_+,NA|106aa|up_2|NZ_CP050332.1_58661_58979_+,NA|132aa|down_0|NZ_CP050332.1_62678_63074_+,NA|503aa|down_7|NZ_CP050332.1_69192_70701_-,NA|47aa|down_8|NZ_CP050332.1_71465_71606_+,NA|46aa|down_9|NZ_CP050332.1_71667_71805_+	NA|296aa|up_9|NZ_CP050332.1_38727_39615_+	cd08482, PBP2_TrpI, The C-terminal substrate binding domain of LysR-type transcriptional regulator TrpI, which is involved in control of tryptophan synthesis, contains type 2 periplasmic binding fold	NA|72aa|up_8|NZ_CP050332.1_39715_39931_+	COG3360, COG3360, Uncharacterized conserved protein [Function unknown]	NA|76aa|up_7|NZ_CP050332.1_40114_40342_+	pfam06649, DUF1161, Protein of unknown function (DUF1161)	NA|563aa|up_6|NZ_CP050332.1_40637_42326_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|3872aa|up_5|NZ_CP050332.1_42438_54054_+	pfam13332, Fil_haemagg_2, Haemagluttinin repeat	NA|134aa|up_4|NZ_CP050332.1_54050_54452_+	NA	NA|72aa|up_3|NZ_CP050332.1_54893_55109_+	PRK05248, PRK05248, hypothetical protein; Provisional	NA|106aa|up_2|NZ_CP050332.1_58661_58979_+	NA	NA|234aa|up_1|NZ_CP050332.1_59209_59911_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|248aa|up_0|NZ_CP050332.1_60202_60946_+	cd13442, CDI_toxin_Bp1026b_like, Mg-dependent tRNAse of the contact-dependent growth inhibition (CDI) system of Burkholderia pseudomallei 1026b, and related proteins	NA|132aa|down_0|NZ_CP050332.1_62678_63074_+	NA	NA|470aa|down_1|NZ_CP050332.1_63338_64748_-	COG3174, COG3174, Predicted membrane protein [Function unknown]	NA|458aa|down_2|NZ_CP050332.1_64911_66285_+	COG5585, COG5585, NAD+--asparagine ADP-ribosyltransferase [Signal transduction mechanisms]	NA|229aa|down_3|NZ_CP050332.1_66780_67467_+	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane]	NA|118aa|down_4|NZ_CP050332.1_67497_67851_+	COG4259, COG4259, Uncharacterized protein conserved in bacteria [Function unknown]	NA|222aa|down_5|NZ_CP050332.1_67847_68513_+	pfam05643, DUF799, Putative bacterial lipoprotein (DUF799)	NA|128aa|down_6|NZ_CP050332.1_68527_68911_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|503aa|down_7|NZ_CP050332.1_69192_70701_-	NA	NA|47aa|down_8|NZ_CP050332.1_71465_71606_+	NA	NA|46aa|down_9|NZ_CP050332.1_71667_71805_+	NA
GCF_013343515.1_ASM1334351v1	NZ_CP050332	Pseudomonas aeruginosa strain DVT413 chromosome, complete genome	2	410006-410119	2	CRISPRCasFinder	no		csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	NA,NA|168aa|down_2|NZ_CP050332.1_414691_415195_-,NA|251aa|down_5|NZ_CP050332.1_416948_417701_-,NA|185aa|down_7|NZ_CP050332.1_418469_419024_-	NA|293aa|up_9|NZ_CP050332.1_396852_397731_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|NZ_CP050332.1_397893_398559_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|NZ_CP050332.1_398621_399683_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|NZ_CP050332.1_399938_401315_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|NZ_CP050332.1_401593_402346_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|NZ_CP050332.1_402386_403745_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|NZ_CP050332.1_403810_405181_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|NZ_CP050332.1_405296_406400_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|NZ_CP050332.1_406818_407916_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|NZ_CP050332.1_407970_409125_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|NZ_CP050332.1_411162_413550_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|NZ_CP050332.1_413660_414713_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_2|NZ_CP050332.1_414691_415195_-	NA	NA|204aa|down_3|NZ_CP050332.1_415299_415911_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_4|NZ_CP050332.1_415909_416929_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_5|NZ_CP050332.1_416948_417701_-	NA	NA|233aa|down_6|NZ_CP050332.1_417749_418448_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_7|NZ_CP050332.1_418469_419024_-	NA	NA|165aa|down_8|NZ_CP050332.1_419289_419784_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|231aa|down_9|NZ_CP050332.1_419788_420481_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_013343515.1_ASM1334351v1	NZ_CP050332	Pseudomonas aeruginosa strain DVT413 chromosome, complete genome	3	852955-853068	3	CRISPRCasFinder	no		csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	Orphan	TATCCGCCATGAAACGTCGGCGCAGCGG	28	1	1	852983-853040	NZ_CP050332.1_3840179-3840236	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	NA|94aa|up_3|NZ_CP050332.1_848397_848679_+,NA	NA|1439aa|up_9|NZ_CP050332.1_831925_836242_+	cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes	NA|1810aa|up_8|NZ_CP050332.1_836238_841668_+	cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes	NA|350aa|up_7|NZ_CP050332.1_841664_842714_+	COG4693, PchG, Oxidoreductase (NAD-binding), involved in siderophore biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|571aa|up_6|NZ_CP050332.1_842710_844423_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|575aa|up_5|NZ_CP050332.1_844419_846144_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|721aa|up_4|NZ_CP050332.1_846235_848398_+	COG4773, FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]	NA|94aa|up_3|NZ_CP050332.1_848397_848679_+	NA	NA|502aa|up_2|NZ_CP050332.1_848680_850186_+	COG3182, PiuB, Uncharacterized iron-regulated membrane protein [Function unknown]	NA|415aa|up_1|NZ_CP050332.1_850178_851423_+	TIGR02718, Probable_transporter	NA|403aa|up_0|NZ_CP050332.1_851527_852736_-	PRK07538, PRK07538, hypothetical protein; Provisional	NA|216aa|down_0|NZ_CP050332.1_853073_853721_-	COG0259, PdxH, Pyridoxamine-phosphate oxidase [Coenzyme metabolism]	NA|279aa|down_1|NZ_CP050332.1_853743_854580_-	pfam02567, PhzC-PhzF, Phenazine biosynthesis-like protein	NA|628aa|down_2|NZ_CP050332.1_854593_856477_-	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|208aa|down_3|NZ_CP050332.1_856473_857097_-	cd01013, isochorismatase, Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological systems	NA|406aa|down_4|NZ_CP050332.1_857093_858311_-	COG3200, AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]	NA|163aa|down_5|NZ_CP050332.1_858346_858835_-	pfam03284, PHZA_PHZB, Phenazine biosynthesis protein A/B	NA|163aa|down_6|NZ_CP050332.1_858864_859353_-	pfam03284, PHZA_PHZB, Phenazine biosynthesis protein A/B	NA|335aa|down_7|NZ_CP050332.1_860049_861054_+	pfam00891, Methyltransf_2, O-methyltransferase	NA|488aa|down_8|NZ_CP050332.1_861064_862528_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|1030aa|down_9|NZ_CP050332.1_862524_865614_-	PRK09579, PRK09579, multidrug efflux RND transporter permease subunit
GCF_013343515.1_ASM1334351v1	NZ_CP050332	Pseudomonas aeruginosa strain DVT413 chromosome, complete genome	4	3443821-3443915	4	CRISPRCasFinder	no		csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	Orphan	GGCGGGGGAGATGGGAAGTGCGATCCTGC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	NA|167aa|up_9|NZ_CP050332.1_3433519_3434020_+,NA|139aa|up_8|NZ_CP050332.1_3434063_3434480_+,NA|243aa|up_7|NZ_CP050332.1_3434728_3435457_+,NA|111aa|up_4|NZ_CP050332.1_3439544_3439877_-,NA|77aa|up_0|NZ_CP050332.1_3442671_3442902_+,NA|111aa|down_2|NZ_CP050332.1_3446477_3446810_-,NA|77aa|down_6|NZ_CP050332.1_3449604_3449835_+	NA|167aa|up_9|NZ_CP050332.1_3433519_3434020_+	NA	NA|139aa|up_8|NZ_CP050332.1_3434063_3434480_+	NA	NA|243aa|up_7|NZ_CP050332.1_3434728_3435457_+	NA	NA|340aa|up_6|NZ_CP050332.1_3435489_3436509_+	cd16902, pesticin_lyz, lysozyme-like C-terminal domain of pesticin	NA|216aa|up_5|NZ_CP050332.1_3436520_3437168_+	pfam11508, DUF3218, Protein of unknown function (DUF3218)	NA|111aa|up_4|NZ_CP050332.1_3439544_3439877_-	NA	NA|119aa|up_3|NZ_CP050332.1_3439983_3440340_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|411aa|up_2|NZ_CP050332.1_3440474_3441707_+	PHA00360, II, replication initiation protein	NA|115aa|up_1|NZ_CP050332.1_3442054_3442399_+	pfam17426, Putative_G5P, Putative Gamma DNA binding protein G5P	NA|77aa|up_0|NZ_CP050332.1_3442671_3442902_+	NA	NA|104aa|down_0|NZ_CP050332.1_3444434_3444746_+	pfam10734, DUF2523, Protein of unknown function (DUF2523)	NA|427aa|down_1|NZ_CP050332.1_3444763_3446044_+	pfam05707, Zot, Zonular occludens toxin (Zot)	NA|111aa|down_2|NZ_CP050332.1_3446477_3446810_-	NA	NA|119aa|down_3|NZ_CP050332.1_3446916_3447273_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|411aa|down_4|NZ_CP050332.1_3447407_3448640_+	PHA00360, II, replication initiation protein	NA|115aa|down_5|NZ_CP050332.1_3448987_3449332_+	pfam17426, Putative_G5P, Putative Gamma DNA binding protein G5P	NA|77aa|down_6|NZ_CP050332.1_3449604_3449835_+	NA	NA|248aa|down_7|NZ_CP050332.1_3450624_3451368_+	PHA00370, III, attachment protein	NA|104aa|down_8|NZ_CP050332.1_3451367_3451679_+	pfam10734, DUF2523, Protein of unknown function (DUF2523)	NA|427aa|down_9|NZ_CP050332.1_3451696_3452977_+	pfam05707, Zot, Zonular occludens toxin (Zot)
GCF_013343515.1_ASM1334351v1	NZ_CP050332	Pseudomonas aeruginosa strain DVT413 chromosome, complete genome	5	3450754-3450848	5	CRISPRCasFinder	no		csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	Orphan	GGCGGGGGAGATGGGAAGTGCGATCCTGC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	NA|77aa|up_8|NZ_CP050332.1_3442671_3442902_+,NA|111aa|up_4|NZ_CP050332.1_3446477_3446810_-,NA|77aa|up_0|NZ_CP050332.1_3449604_3449835_+,NA|181aa|down_3|NZ_CP050332.1_3454990_3455533_+	NA|115aa|up_9|NZ_CP050332.1_3442054_3442399_+	pfam17426, Putative_G5P, Putative Gamma DNA binding protein G5P	NA|77aa|up_8|NZ_CP050332.1_3442671_3442902_+	NA	NA|248aa|up_7|NZ_CP050332.1_3443691_3444435_+	PHA00370, III, attachment protein	NA|104aa|up_6|NZ_CP050332.1_3444434_3444746_+	pfam10734, DUF2523, Protein of unknown function (DUF2523)	NA|427aa|up_5|NZ_CP050332.1_3444763_3446044_+	pfam05707, Zot, Zonular occludens toxin (Zot)	NA|111aa|up_4|NZ_CP050332.1_3446477_3446810_-	NA	NA|119aa|up_3|NZ_CP050332.1_3446916_3447273_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|411aa|up_2|NZ_CP050332.1_3447407_3448640_+	PHA00360, II, replication initiation protein	NA|115aa|up_1|NZ_CP050332.1_3448987_3449332_+	pfam17426, Putative_G5P, Putative Gamma DNA binding protein G5P	NA|77aa|up_0|NZ_CP050332.1_3449604_3449835_+	NA	NA|104aa|down_0|NZ_CP050332.1_3451367_3451679_+	pfam10734, DUF2523, Protein of unknown function (DUF2523)	NA|427aa|down_1|NZ_CP050332.1_3451696_3452977_+	pfam05707, Zot, Zonular occludens toxin (Zot)	NA|360aa|down_2|NZ_CP050332.1_3453145_3454225_+	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes	NA|181aa|down_3|NZ_CP050332.1_3454990_3455533_+	NA	NA|400aa|down_4|NZ_CP050332.1_3455555_3456755_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|289aa|down_5|NZ_CP050332.1_3457048_3457915_+	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH)	NA|321aa|down_6|NZ_CP050332.1_3457999_3458962_-	COG4447, COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor [General function prediction only]	NA|801aa|down_7|NZ_CP050332.1_3458972_3461375_-	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only]	NA|529aa|down_8|NZ_CP050332.1_3461383_3462970_-	pfam06980, DUF1302, Protein of unknown function (DUF1302)	NA|475aa|down_9|NZ_CP050332.1_3463053_3464478_-	pfam07044, DUF1329, Protein of unknown function (DUF1329)
GCF_013343515.1_ASM1334351v1	NZ_CP050332	Pseudomonas aeruginosa strain DVT413 chromosome, complete genome	6	6141044-6141135	6	CRISPRCasFinder	no		csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	Orphan	CCGACAACGGCAGCGAGCAGACC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL	NA|249aa|up_9|NZ_CP050332.1_6131520_6132267_+,NA|208aa|down_2|NZ_CP050332.1_6142731_6143355_-	NA|249aa|up_9|NZ_CP050332.1_6131520_6132267_+	NA	NA|288aa|up_8|NZ_CP050332.1_6132273_6133137_-	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]	NA|422aa|up_7|NZ_CP050332.1_6133344_6134610_+	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins	NA|139aa|up_6|NZ_CP050332.1_6134784_6135201_-	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	NA|180aa|up_5|NZ_CP050332.1_6135355_6135895_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|115aa|up_4|NZ_CP050332.1_6135983_6136328_+	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE	NA|136aa|up_3|NZ_CP050332.1_6136371_6136779_-	pfam07498, Rho_N, Rho termination factor, N-terminal domain	NA|271aa|up_2|NZ_CP050332.1_6136925_6137738_+	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|690aa|up_1|NZ_CP050332.1_6137739_6139809_-	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]	NA|178aa|up_0|NZ_CP050332.1_6140104_6140638_+	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]	NA|256aa|down_0|NZ_CP050332.1_6141299_6142067_-	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|205aa|down_1|NZ_CP050332.1_6142063_6142678_-	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|208aa|down_2|NZ_CP050332.1_6142731_6143355_-	NA	NA|230aa|down_3|NZ_CP050332.1_6143492_6144182_+	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|464aa|down_4|NZ_CP050332.1_6144160_6145552_+	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|439aa|down_5|NZ_CP050332.1_6145542_6146859_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|363aa|down_6|NZ_CP050332.1_6147078_6148167_-	COG3239, DesA, Fatty acid desaturase [Lipid metabolism]	NA|367aa|down_7|NZ_CP050332.1_6148187_6149288_-	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain	NA|210aa|down_8|NZ_CP050332.1_6149446_6150076_+	PRK11202, PRK11202, HTH-type transcriptional repressor FabR	NA|168aa|down_9|NZ_CP050332.1_6150305_6150809_+	PRK13261, ureE, urease accessory protein UreE; Provisional
