The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP054472	Pseudomonas aeruginosa strain PAAK088 chromosome, complete genome	6390212	633530	677111	6390212	tail,tRNA,holin	Pseudomonas_phage(47.06%)	45	NA	NA
WP_003129196.1|633530_634556_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.1	8.3e-109
WP_003085061.1|634634_635204_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003099587.1|635287_635641_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_003137363.1|635631_636174_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_003099584.1|636146_637379_-	multifunctional CCA addition/repair protein	NA	A0A076G5T8	Escherichia_phage	43.1	2.6e-77
WP_003109021.1|637422_637929_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003099581.1|638022_639576_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_003099579.1|639572_640844_-	YeaH/YhbH family protein	NA	A0A140HLI1	Bacillus_phage	37.2	4.2e-09
WP_003085078.1|640944_642867_-	PrkA family serine protein kinase	NA	NA	NA	NA	NA
WP_003099577.1|643147_643480_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA	NA
WP_010792011.1|643523_644375_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	A0A2R4ALP3	Aeromonas_phage	44.2	2.4e-08
WP_003085085.1|644374_644755_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003099569.1|644791_645598_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_003123920.1|645713_646700_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_003109024.1|646696_647989_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_174537919.1|647969_650744_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_003099554.1|650870_651887_+	phosphotransferase	NA	NA	NA	NA	NA
WP_174537921.1|651883_652558_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003117960.1|652559_653318_+	DnaJ domain-containing protein	NA	NA	NA	NA	NA
WP_174537923.1|653318_654380_-	alpha/beta hydrolase family protein	NA	NA	NA	NA	NA
WP_023102820.1|654531_656925_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_003085103.1|656970_657603_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003085106.1|657731_658766_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_174537925.1|658999_660109_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.8	2.3e-27
WP_003113206.1|661325_662573_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003099535.1|662678_663509_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003085122.1|663632_664307_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003113205.1|664306_665125_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003113204.1|665197_666676_+	anthranilate synthase component I	NA	NA	NA	NA	NA
WP_003113203.1|666995_667310_-	transcription regulatory protein PrtN	NA	NA	NA	NA	NA
WP_003113202.1|667409_668180_-	helix-turn-helix transcriptional regulator	NA	A0A1B0Z078	Pseudomonas_phage	59.1	1.4e-71
WP_003085132.1|668637_668838_+	repressor PtrB	NA	W6ATC1	Enterobacter_phage	58.3	3.7e-05
WP_003113201.1|668885_669245_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017002346.1|669607_670051_+|holin	holin	holin	B5TK61	Pseudomonas_phage	51.8	6.5e-26
WP_174537927.1|670066_670696_+	glycoside hydrolase family 19 protein	NA	A0A125RNP1	Pseudomonas_phage	77.5	1.0e-85
WP_014602438.1|670692_671055_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003118919.1|671051_671309_+	hypothetical protein	NA	A0A125RNP3	Pseudomonas_phage	64.6	8.3e-18
WP_134253409.1|671624_672119_+|tail	phage tail protein	tail	A0A286S1Q8	Klebsiella_phage	55.9	5.3e-45
WP_004352265.1|672130_672478_+|tail	phage tail assembly chaperone family protein, TAC	tail	NA	NA	NA	NA
WP_003113188.1|672507_672762_+	hypothetical protein	NA	A0A2H4PI34	Pseudomonas_phage	38.4	6.3e-10
WP_023102822.1|672808_674644_+|tail	phage tail tape measure protein	tail	A0A0S2SYD9	Pseudomonas_phage	35.8	2.0e-28
WP_003113186.1|674636_674978_+|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	40.0	1.4e-17
WP_023102823.1|674985_675681_+|tail	phage minor tail protein L	tail	A0A1B0VNE0	Pseudomonas_phage	49.8	1.3e-68
WP_003117973.1|675683_676454_+	C40 family peptidase	NA	A0A2D1GNP8	Pseudomonas_phage	55.6	4.2e-81
WP_003117974.1|676508_677111_+|tail	tail assembly protein	tail	A0A1V0E8A0	Vibrio_phage	57.3	6.5e-53
>prophage 2
NZ_CP054472	Pseudomonas aeruginosa strain PAAK088 chromosome, complete genome	6390212	681430	687734	6390212		Pseudomonas_phage(42.86%)	8	NA	NA
WP_023102825.1|681430_682522_+	hypothetical protein	NA	A0A0S2SY45	Pseudomonas_phage	37.1	9.6e-47
WP_023085656.1|682521_682857_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023102826.1|682837_683068_+	hypothetical protein	NA	A0A1W6JT87	Pseudomonas_phage	62.7	5.7e-18
WP_174537929.1|683843_684557_+	hypothetical protein	NA	A0A0U5DWP6	unidentified_phage	54.9	1.9e-67
WP_023102828.1|684553_684838_+	hypothetical protein	NA	A0A0A7DJU8	Pseudomonas_phage	64.5	1.3e-24
WP_003101640.1|685244_685850_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	65.8	6.0e-75
WP_003085203.1|685851_686901_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	57.8	1.8e-111
WP_003085205.1|686897_687734_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	56.9	2.1e-70
>prophage 3
NZ_CP054472	Pseudomonas aeruginosa strain PAAK088 chromosome, complete genome	6390212	2623597	2630491	6390212	tRNA	uncultured_Caudovirales_phage(85.71%)	9	NA	NA
WP_003097631.1|2623597_2624878_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.4	8.2e-98
WP_003113366.1|2624879_2626277_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_174538196.1|2626281_2627256_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_003097625.1|2627343_2628327_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	74.0	3.5e-141
WP_003119979.1|2628323_2628659_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	69.4	1.5e-38
WP_023115289.1|2628655_2628961_-	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	58.6	7.3e-21
WP_016562012.1|2628960_2629320_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	61.7	1.1e-34
WP_016562011.1|2629316_2629712_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	71.3	3.5e-47
WP_003090386.1|2629822_2630491_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	82.1	1.5e-90
>prophage 4
NZ_CP054472	Pseudomonas aeruginosa strain PAAK088 chromosome, complete genome	6390212	2672404	2707729	6390212	holin,capsid,integrase,portal,protease,head,terminase	Pseudomonas_phage(60.0%)	47	2668492:2668507	2679321:2679336
2668492:2668507	attL	CCAGACCTCGCAGTCG	NA	NA	NA	NA
WP_016562002.1|2672404_2673433_-|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	56.9	2.3e-98
WP_016562001.1|2673433_2673646_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_121500375.1|2675052_2675793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034058646.1|2675849_2676119_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034066690.1|2676115_2678194_-	DNA cytosine methyltransferase	NA	A0A140IES2	Pseudomonas_phage	84.1	0.0e+00
WP_052151598.1|2678310_2678604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034066689.1|2678717_2679515_-	hypothetical protein	NA	A0A0E3M3Z6	Verrucomicrobia_phage	43.3	7.7e-46
2679321:2679336	attR	CCAGACCTCGCAGTCG	NA	NA	NA	NA
WP_124171382.1|2679630_2679957_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034061655.1|2680124_2681870_-	AAA family ATPase	NA	H2BD46	Pseudomonas_phage	97.2	6.0e-301
WP_034061658.1|2681873_2682854_-	cell division protein FtsK	NA	H2BD47	Pseudomonas_phage	61.2	6.7e-92
WP_009314053.1|2682866_2683067_-	hypothetical protein	NA	J7I437	Pseudomonas_phage	100.0	1.9e-30
WP_014602814.1|2683073_2683973_-	recombination protein RecT	NA	Q858E1	Salmonella_phage	73.6	3.2e-104
WP_034061661.1|2683985_2684894_-	YqaJ viral recombinase family protein	NA	Q858E0	Salmonella_phage	71.3	1.4e-123
WP_023113718.1|2684960_2685245_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023113719.1|2685231_2685372_-	hypothetical protein	NA	J7I432	Pseudomonas_phage	70.0	4.0e-06
WP_029528657.1|2685368_2685608_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014602817.1|2685600_2685783_-	hypothetical protein	NA	Q9MC67	Pseudomonas_phage	100.0	1.7e-25
WP_003099037.1|2685779_2686001_-	hypothetical protein	NA	H2BD53	Pseudomonas_phage	100.0	1.2e-33
WP_009314058.1|2685984_2686131_-	hypothetical protein	NA	J7HXJ0	Pseudomonas_phage	100.0	2.5e-11
WP_009314060.1|2687113_2687326_-	hypothetical protein	NA	L7TKR9	Pseudomonas_virus	97.1	8.9e-34
WP_124074828.1|2687425_2687737_+	hypothetical protein	NA	A0A2H4J0J8	uncultured_Caudovirales_phage	50.5	9.1e-19
WP_033982144.1|2688440_2688752_+	DUF1654 domain-containing protein	NA	A0A0S2SYC9	Pseudomonas_phage	61.1	1.6e-26
WP_071542656.1|2689136_2689742_+	sce7726 family protein	NA	A0A291I9I8	Lactobacillus_phage	39.5	1.4e-07
WP_079382220.1|2689689_2690808_-	beta family protein	NA	NA	NA	NA	NA
WP_015648953.1|2690797_2691364_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A142KB62	Gordonia_phage	35.0	2.4e-09
WP_065424967.1|2691368_2691980_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015648951.1|2692015_2692849_-	Cro/CI family transcriptional regulator	NA	A0A0S2SYF7	Pseudomonas_phage	88.8	9.6e-140
WP_015648950.1|2692938_2693118_+	Cro/Cl family transcriptional regulator	NA	A0A0S2SYB8	Pseudomonas_phage	98.3	1.9e-24
WP_015648949.1|2693150_2693534_+	hypothetical protein	NA	H2BD65	Pseudomonas_phage	97.6	5.5e-58
WP_023096627.1|2693701_2694274_+	hypothetical protein	NA	H2BD67	Pseudomonas_phage	99.5	1.2e-101
WP_034061664.1|2694276_2695287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034061691.1|2695414_2695828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019396730.1|2695820_2696264_+	RusA family crossover junction endodeoxyribonuclease	NA	J7I4J7	Pseudomonas_phage	99.3	2.1e-77
WP_034061667.1|2696292_2697162_+	hypothetical protein	NA	J7HXH6	Pseudomonas_phage	94.5	7.4e-159
WP_021263386.1|2697252_2697828_-	type II toxin-antitoxin system HicB family antitoxin	NA	Q7Y3V7	Yersinia_phage	52.7	2.4e-28
WP_019486655.1|2697868_2698048_-	type II toxin-antitoxin system HicA family toxin	NA	A0A2H4JDU5	uncultured_Caudovirales_phage	55.0	3.2e-08
WP_003119044.1|2698507_2698843_+|holin	phage holin, lambda family	holin	A0A1W6JTC7	Pseudomonas_phage	100.0	2.2e-58
WP_034058608.1|2698839_2699457_+	glycoside hydrolase family 19 protein	NA	A0A0U4JP23	Pseudomonas_phage	89.3	8.2e-104
WP_170958635.1|2699474_2699906_+	hypothetical protein	NA	A0A0U4JX95	Pseudomonas_phage	86.2	6.7e-52
WP_034061674.1|2700002_2700740_+	hypothetical protein	NA	A0A1B0Z000	Pseudomonas_phage	46.2	2.5e-43
WP_031627904.1|2700954_2701500_+|terminase	terminase small subunit	terminase	A0A1B0Z033	Pseudomonas_phage	63.7	1.8e-57
WP_014602834.1|2701471_2703400_+|terminase	phage terminase large subunit family protein	terminase	A0A1B0Z2K0	Pseudomonas_phage	65.2	1.8e-253
WP_034061677.1|2703415_2703640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023111700.1|2703639_2705115_+|portal	phage portal protein	portal	A0A2H4JFL5	uncultured_Caudovirales_phage	70.3	1.4e-197
WP_023111701.1|2705111_2706308_+|protease	Clp protease ClpP	protease	A0A2H4JDI2	uncultured_Caudovirales_phage	58.0	4.1e-115
WP_079382219.1|2706307_2706667_+|head	head decoration protein	head	A0A2H4JF15	uncultured_Caudovirales_phage	52.3	2.0e-17
WP_014602838.1|2706733_2707729_+|capsid	major capsid protein	capsid	A0A2H4J890	uncultured_Caudovirales_phage	69.9	5.7e-131
>prophage 5
NZ_CP054472	Pseudomonas aeruginosa strain PAAK088 chromosome, complete genome	6390212	2976210	3015473	6390212	tail,plate	Planktothrix_phage(33.33%)	32	NA	NA
WP_003122677.1|2976210_2977494_-|tail	pyoverdine-tailoring periplasmic protein PvdN	tail	NA	NA	NA	NA
WP_003144008.1|2977516_2978863_-|tail	pyoverdine-tailoring dipeptidase-like protein PvdM	tail	NA	NA	NA	NA
WP_003163333.1|2979076_2980723_+	pyoverdine maturation tyrosinase PvdP	NA	NA	NA	NA	NA
WP_174538228.1|2982201_2984193_-	pyoverdine export/recycling transporter ATP-binding/permease subunit PvdT	NA	G9BWD6	Planktothrix_phage	39.3	9.0e-35
WP_003089547.1|2984192_2985368_-	pyoverdine export/recycling transporter periplasmic adaptor subunit PvdR	NA	NA	NA	NA	NA
WP_003144014.1|2985468_2986464_-	FecR family protein	NA	NA	NA	NA	NA
WP_003122684.1|2986624_2987104_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003089540.1|2987220_2988552_+	SidA/IucD/PvdA family monooxygenase	NA	NA	NA	NA	NA
WP_023119993.1|2988674_2990963_+	acylase	NA	NA	NA	NA	NA
WP_003089535.1|2991143_2991467_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_003124571.1|2991508_2992429_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003104946.1|2992525_2993677_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003089526.1|2993748_2993991_-	DUF1654 domain-containing protein	NA	NA	NA	NA	NA
WP_003104944.1|2994285_2994522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003089521.1|2994786_2995257_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_003144022.1|2995253_2997569_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_015502885.1|2997985_2999191_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023103146.1|2999391_3000033_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003089513.1|3000308_3000704_+	DUF4280 domain-containing protein	NA	NA	NA	NA	NA
WP_023103147.1|3000726_3001263_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA	NA
WP_023103148.1|3001273_3003280_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	29.5	7.7e-42
WP_174538229.1|3003316_3004384_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003124578.1|3004422_3004956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023103149.1|3005029_3007579_-	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	29.4	3.2e-77
WP_003114517.1|3007580_3008597_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_003104926.1|3008560_3010354_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_003122696.1|3010337_3010763_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_003089495.1|3010775_3011273_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_003089494.1|3011345_3012830_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_003089493.1|3012852_3013398_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_003089492.1|3013605_3014082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023086221.1|3014141_3015473_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
