assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013328855.1_ASM1332885v1	NZ_CP054422	Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) strain 14-SA00836-0 chromosome, complete genome	1	1024639-1024812	1	CRISPRCasFinder	no		csa3,DEDDh,RT,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	Orphan	CATTATTCTCAGATGAACTCAAAT	24	0	0	NA	NA	NA	2	2	Orphan	csa3,DEDDh,RT,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	NA|81aa|up_9|NZ_CP054422.1_1009738_1009981_+,NA|481aa|up_7|NZ_CP054422.1_1010816_1012259_-,NA|289aa|up_4|NZ_CP054422.1_1018675_1019542_-,NA|201aa|up_3|NZ_CP054422.1_1019853_1020456_-,NA|268aa|up_2|NZ_CP054422.1_1020855_1021659_-,NA|75aa|up_1|NZ_CP054422.1_1021832_1022057_-,NA|216aa|up_0|NZ_CP054422.1_1022114_1022762_-,NA|144aa|down_0|NZ_CP054422.1_1025974_1026406_+,NA|78aa|down_3|NZ_CP054422.1_1029175_1029409_+,NA|122aa|down_4|NZ_CP054422.1_1029433_1029799_+	NA|81aa|up_9|NZ_CP054422.1_1009738_1009981_+	NA	NA|95aa|up_8|NZ_CP054422.1_1009992_1010277_+	pfam06412, TraD, Conjugal transfer protein TraD	NA|481aa|up_7|NZ_CP054422.1_1010816_1012259_-	NA	NA|356aa|up_6|NZ_CP054422.1_1015573_1016641_+	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain	NA|322aa|up_5|NZ_CP054422.1_1016637_1017603_+	cd10971, CE4_DAC_u2_5s, Putative catalytic NodB homology domain of uncharacterized prokaryotic polysaccharide deacetylases which consist of a 5-stranded beta/alpha barrel	NA|289aa|up_4|NZ_CP054422.1_1018675_1019542_-	NA	NA|201aa|up_3|NZ_CP054422.1_1019853_1020456_-	NA	NA|268aa|up_2|NZ_CP054422.1_1020855_1021659_-	NA	NA|75aa|up_1|NZ_CP054422.1_1021832_1022057_-	NA	NA|216aa|up_0|NZ_CP054422.1_1022114_1022762_-	NA	NA|144aa|down_0|NZ_CP054422.1_1025974_1026406_+	NA	NA|502aa|down_1|NZ_CP054422.1_1026402_1027908_+	PRK15346, PRK15346, EscC/YscC/HrcC family type III secretion system outer membrane ring protein	NA|419aa|down_2|NZ_CP054422.1_1027917_1029174_+	TIGR02500, Yop_proteins_translocation_protein_D, type III secretion apparatus protein, YscD/HrpQ family	NA|78aa|down_3|NZ_CP054422.1_1029175_1029409_+	NA	NA|122aa|down_4|NZ_CP054422.1_1029433_1029799_+	NA	NA|202aa|down_5|NZ_CP054422.1_1029824_1030430_+	PRK15364, PRK15364, type III secretion system translocon protein SseB	NA|262aa|down_6|NZ_CP054422.1_1030445_1031231_+	PRK15362, PRK15362, type III secretion system translocon protein	NA|242aa|down_7|NZ_CP054422.1_1031252_1031978_+	pfam05802, EspB, Enterobacterial EspB protein	NA|73aa|down_8|NZ_CP054422.1_1032034_1032253_+	PRK15344, PRK15344, type III secretion system needle protein SsaG; Provisional	NA|67aa|down_9|NZ_CP054422.1_1032294_1032495_+	pfam06287, DUF1039, Protein of unknown function (DUF1039)
GCF_013328855.1_ASM1332885v1	NZ_CP054422	Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) strain 14-SA00836-0 chromosome, complete genome	2	1624582-1624684	2	CRISPRCasFinder	no		csa3,DEDDh,RT,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	Orphan	GCCGCAGTATCAGCAGCCGCAACAG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,RT,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	NA|128aa|up_5|NZ_CP054422.1_1615478_1615862_-,NA	NA|226aa|up_9|NZ_CP054422.1_1612664_1613342_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|287aa|up_8|NZ_CP054422.1_1613361_1614222_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|304aa|up_7|NZ_CP054422.1_1614330_1615242_+	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional	NA|73aa|up_6|NZ_CP054422.1_1615332_1615551_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|128aa|up_5|NZ_CP054422.1_1615478_1615862_-	NA	NA|235aa|up_4|NZ_CP054422.1_1615862_1616567_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|574aa|up_3|NZ_CP054422.1_1616611_1618333_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|up_2|NZ_CP054422.1_1618333_1620100_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|323aa|up_1|NZ_CP054422.1_1620214_1621183_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|up_0|NZ_CP054422.1_1621730_1622225_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|204aa|down_0|NZ_CP054422.1_1626407_1627019_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_1|NZ_CP054422.1_1627028_1628372_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_2|NZ_CP054422.1_1628630_1629923_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|815aa|down_3|NZ_CP054422.1_1630157_1632602_+	PRK14990, PRK14990, anaerobic dimethyl sulfoxide reductase subunit A; Provisional	NA|206aa|down_4|NZ_CP054422.1_1632612_1633230_+	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit	NA|288aa|down_5|NZ_CP054422.1_1633231_1634095_+	pfam04976, DmsC, DMSO reductase anchor subunit (DmsC)	NA|209aa|down_6|NZ_CP054422.1_1634149_1634776_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|383aa|down_7|NZ_CP054422.1_1635087_1636236_+	PRK03633, PRK03633, putative MFS family transporter protein; Provisional	NA|474aa|down_8|NZ_CP054422.1_1636453_1637875_+	PRK15238, PRK15238, inner membrane transporter YjeM; Provisional	NA|259aa|down_9|NZ_CP054422.1_1638014_1638791_-	PRK11145, pflA, pyruvate formate lyase 1-activating protein
GCF_013328855.1_ASM1332885v1	NZ_CP054422	Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) strain 14-SA00836-0 chromosome, complete genome	3	3766962-3767783	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	csa3,DEDDh,RT,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	13,13,12	13	TypeI-E	csa3,DEDDh,RT,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	NA,NA	NA|254aa|up_9|NZ_CP054422.1_3758828_3759590_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP054422.1_3759570_3760620_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP054422.1_3760616_3761096_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP054422.1_3761095_3761806_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP054422.1_3761824_3762136_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP054422.1_3762326_3762650_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP054422.1_3762700_3763306_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|480aa|up_2|NZ_CP054422.1_3763292_3764732_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP054422.1_3764741_3765650_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|349aa|up_0|NZ_CP054422.1_3765900_3766947_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP054422.1_3767879_3768173_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP054422.1_3768172_3769093_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP054422.1_3769089_3769740_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP054422.1_3769721_3770468_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP054422.1_3770478_3771534_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|NZ_CP054422.1_3771547_3772084_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|519aa|down_6|NZ_CP054422.1_3772080_3773637_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	NA|318aa|down_7|NZ_CP054422.1_3776743_3777697_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|down_8|NZ_CP054422.1_3777784_3778519_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_9|NZ_CP054422.1_3778627_3780340_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
