The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP051765	Escherichia coli strain SCU-113 chromosome, complete genome	4765874	1056529	1069713	4765874		Escherichia_phage(50.0%)	12	NA	NA
WP_001295182.1|1056529_1057291_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.0	3.4e-59
WP_000254708.1|1057284_1057911_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	5.7e-36
WP_001272592.1|1058050_1059190_+	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	1.7e-06
WP_000081550.1|1059252_1060245_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
WP_000104429.1|1060339_1061704_-	GntP family transporter	NA	NA	NA	NA	NA
WP_001136918.1|1061792_1062569_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_001278994.1|1062573_1063212_-	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
WP_000590385.1|1063208_1064471_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.4	3.7e-135
WP_000847985.1|1064467_1065376_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.9	3.0e-118
WP_001297141.1|1065571_1066339_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.7	3.3e-70
WP_001141329.1|1066389_1067046_-	protein-serine/threonine phosphatase	NA	A0A222YWF0	Escherichia_phage	46.3	7.3e-50
WP_001272924.1|1067151_1069713_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	1.7e-30
>prophage 2
NZ_CP051765	Escherichia coli strain SCU-113 chromosome, complete genome	4765874	1663058	1672500	4765874		Enterobacteria_phage(85.71%)	10	NA	NA
WP_000569361.1|1663058_1663985_+	glycine betaine ABC transporter ATP binding protein YehX	NA	G3M9Y6	Bacillus_virus	30.8	1.7e-23
WP_000783120.1|1663989_1664721_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_001216963.1|1664701_1664809_-	protein YohO	NA	NA	NA	NA	NA
WP_001240401.1|1664868_1665600_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.5	9.7e-112
WP_001295431.1|1665821_1667507_+	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
WP_000598641.1|1667503_1668223_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_001295430.1|1668269_1668740_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	100.0	1.8e-82
WP_001295429.1|1668780_1669242_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	100.0	1.9e-76
WP_001331478.1|1669366_1671367_-	SWIM zinc finger family protein	NA	Q9EYF6	Enterobacteria_phage	96.0	0.0e+00
WP_001292767.1|1671363_1672500_-	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	97.1	4.6e-161
>prophage 3
NZ_CP051765	Escherichia coli strain SCU-113 chromosome, complete genome	4765874	2215316	2284299	4765874	protease,portal,terminase,lysis,tail,integrase	Enterobacteria_phage(46.3%)	79	2222892:2222907	2253295:2253310
WP_001260855.1|2215316_2216138_-|protease	serine protease	protease	NA	NA	NA	NA
WP_000233090.1|2216237_2216321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000743959.1|2216413_2216749_-	acid shock protein	NA	NA	NA	NA	NA
WP_000091840.1|2217145_2218399_-	MFS transporter	NA	NA	NA	NA	NA
WP_001019530.1|2218505_2219399_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000225276.1|2219533_2220754_+	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA	NA
WP_000919231.1|2220878_2221574_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA	NA
WP_001315626.1|2221526_2222819_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA	NA
2222892:2222907	attL	CTTTAAGAGATAAAAA	NA	NA	NA	NA
WP_000148710.1|2222977_2223592_-	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	36.3	8.7e-29
WP_000526494.1|2223634_2224489_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_000213028.1|2224490_2225108_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.6	9.5e-76
WP_174190326.1|2225118_2227542_-	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	48.8	4.4e-209
WP_000041690.1|2227602_2230029_-	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.3	2.7e-214
WP_001295396.1|2230227_2230533_-	DUF1161 domain-containing protein	NA	NA	NA	NA	NA
WP_001321287.1|2230640_2231351_+	YnfC family lipoprotein	NA	NA	NA	NA	NA
WP_001138581.1|2231353_2231914_-	spermidine N1-acetyltransferase	NA	NA	NA	NA	NA
WP_000705197.1|2231948_2232290_-	DUF1283 family protein	NA	NA	NA	NA	NA
WP_000598292.1|2232424_2232751_+	YnfA family protein	NA	A0A218MNG8	uncultured_virus	55.6	9.9e-24
WP_001295394.1|2232956_2234171_+	starvation-sensing protein RspA	NA	Q6A202	Oenococcus_phage	29.0	1.4e-46
WP_000836079.1|2234182_2235202_+	Zn-dependent oxidoreductase	NA	E3SJ82	Synechococcus_phage	25.9	9.7e-17
WP_001389342.1|2235259_2235388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021526340.1|2235389_2236670_-|integrase	site-specific integrase	integrase	B6DZ48	Enterobacteria_phage	62.1	1.9e-155
WP_000005552.1|2236704_2236956_-	excisionase family protein	NA	S4TND0	Salmonella_phage	50.0	2.2e-15
WP_032163991.1|2237028_2239467_-	exonuclease	NA	V5UQJ3	Shigella_phage	47.0	8.3e-115
WP_001070257.1|2239557_2239749_-	DUF1482 family protein	NA	NA	NA	NA	NA
WP_000854562.1|2239745_2239934_-	cell division inhibition protein DicB	NA	NA	NA	NA	NA
WP_000344950.1|2240413_2240989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000379589.1|2240990_2241146_-	DUF1391 family protein	NA	M4QQ57	Salicola_phage	51.1	8.8e-07
WP_000233320.1|2241443_2241863_-	helix-turn-helix domain-containing protein	NA	A0A2I6PIE7	Escherichia_phage	47.5	4.2e-19
WP_001072337.1|2241942_2242197_+	hypothetical protein	NA	A0A2I6PIE5	Escherichia_phage	60.3	2.8e-18
WP_000693867.1|2242193_2242619_+	Rha family transcriptional regulator	NA	NA	NA	NA	NA
WP_042093958.1|2242690_2243761_+	phage replisome organizer	NA	A0A088CD36	Shigella_phage	64.6	6.1e-62
WP_001557864.1|2243801_2244227_+	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	89.6	6.6e-60
WP_001557863.1|2244467_2244695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_044866928.1|2244848_2246729_-	ATP-dependent endonuclease	NA	E5E3R2	Burkholderia_phage	69.4	1.3e-245
WP_001557860.1|2247236_2247344_-	hypothetical protein	NA	Q7Y2Q9	Escherichia_phage	100.0	3.8e-09
WP_072794392.1|2247388_2247601_+	type I toxin-antitoxin system Hok family toxin	NA	A0A0U2QV81	Escherichia_phage	72.9	4.3e-20
WP_096222485.1|2247768_2248047_+	hypothetical protein	NA	A0A077KB22	Edwardsiella_phage	37.1	4.6e-06
WP_096222484.1|2248048_2249098_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	57.6	7.4e-113
WP_001047135.1|2249111_2249864_+	antitermination protein	NA	A0A192Y5X6	Salmonella_phage	92.8	7.1e-134
WP_120795389.1|2250141_2250231_-	Qin prophage; protein YnfS	NA	NA	NA	NA	NA
WP_000087756.1|2250285_2250498_-	cold shock-like protein CspF	NA	NA	NA	NA	NA
WP_000066484.1|2250798_2251014_+	cold shock-like protein CspB	NA	A0A1W6JNX5	Morganella_phage	76.5	3.4e-25
WP_000839590.1|2251767_2251983_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	94.4	1.1e-31
WP_001309518.1|2251966_2252299_+	DUF1327 domain-containing protein	NA	K7PGU6	Enterobacteria_phage	64.3	1.1e-25
WP_001092971.1|2252295_2252829_+	lysozyme	NA	K7PLY1	Enterobacteria_phage	93.2	6.4e-97
WP_001071769.1|2252825_2253323_+	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	29.5	2.9e-06
2253295:2253310	attR	CTTTAAGAGATAAAAA	NA	NA	NA	NA
WP_000066495.1|2253685_2253898_+	cold shock protein CspI	NA	A0A1W6JNX5	Morganella_phage	74.3	1.2e-22
WP_071524604.1|2253908_2254097_+	cold-shock protein	NA	NA	NA	NA	NA
WP_122134696.1|2254099_2254165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001309517.1|2254244_2254400_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001019606.1|2254571_2254745_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
WP_000035574.1|2254896_2255307_-	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	89.0	2.1e-63
WP_001031431.1|2255607_2255814_+	hypothetical protein	NA	A0A0K2FJ18	Enterobacteria_phage	91.2	6.7e-26
WP_000421825.1|2256374_2256914_+	DUF1441 family protein	NA	A5LH26	Enterobacteria_phage	100.0	1.8e-94
WP_000507029.1|2256922_2259022_+|terminase	phage terminase large subunit family protein	terminase	A5LH27	Enterobacteria_phage	99.0	0.0e+00
WP_001072975.1|2259018_2259231_+	hypothetical protein	NA	A5LH28	Enterobacteria_phage	100.0	1.1e-31
WP_053290587.1|2259230_2260739_+|portal	phage portal protein	portal	A5LH29	Enterobacteria_phage	99.0	6.1e-286
WP_097423632.1|2260683_2262711_+|protease	Clp protease ClpP	protease	K7PGT6	Enterobacteria_phage	99.4	0.0e+00
WP_053290589.1|2262797_2263121_+	DUF2190 family protein	NA	K7PLV6	Enterobacteria_phage	99.1	1.9e-51
WP_001283152.1|2263113_2263389_+	DNA breaking-rejoining protein	NA	K7PH43	Enterobacteria_phage	98.9	8.6e-45
WP_000677112.1|2263400_2263979_+|tail	phage tail protein	tail	A0A291AWZ0	Escherichia_phage	99.5	9.4e-102
WP_023148639.1|2263975_2264377_+|tail	phage tail protein	tail	K7PJP5	Enterobacteria_phage	100.0	1.1e-72
WP_053290591.1|2264387_2265131_+|tail	phage tail protein	tail	A5LH35	Enterobacteria_phage	99.2	1.7e-132
WP_001372042.1|2265191_2265578_+|tail	phage minor tail protein G	tail	A5LH36	Enterobacteria_phage	100.0	4.3e-66
WP_001161009.1|2265586_2265916_+|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	100.0	7.6e-56
WP_000372047.1|2265887_2268953_+|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	98.4	0.0e+00
WP_000447251.1|2268952_2269282_+|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	99.1	3.0e-60
WP_001152368.1|2269291_2269990_+|tail	phage minor tail protein L	tail	A5LH40	Enterobacteria_phage	99.1	3.9e-134
WP_032160992.1|2269995_2270739_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	95.9	8.0e-146
WP_072153727.1|2270636_2271284_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	95.8	3.6e-110
WP_000515472.1|2271344_2274740_+	host specificity protein J	NA	A0A0K2FI38	Escherichia_phage	89.8	0.0e+00
WP_001233167.1|2274807_2275407_+	Ail/Lom family outer membrane beta-barrel protein	NA	A5LH44	Enterobacteria_phage	98.0	1.7e-109
WP_174190268.1|2275471_2278870_+|tail	prophage tail fiber N-terminal domain-containing protein	tail	X2KTY7	Enterobacteria_phage	35.5	1.8e-11
WP_000885614.1|2278869_2279445_+|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	94.8	5.5e-102
WP_000086522.1|2279542_2280133_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	39.3	1.5e-25
WP_000836768.1|2280449_2280683_-	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
WP_120795384.1|2280751_2280865_-	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000527797.1|2282838_2284299_+	mannitol dehydrogenase family protein	NA	G8DCZ3	Micromonas_pusilla_virus	29.8	1.1e-42
>prophage 4
NZ_CP051765	Escherichia coli strain SCU-113 chromosome, complete genome	4765874	2654112	2753386	4765874	portal,tRNA,terminase,head,lysis,tail,integrase,capsid	Enterobacteria_phage(50.0%)	116	2676061:2676076	2755355:2755370
WP_000152933.1|2654112_2654697_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_000505866.1|2654813_2655905_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_001342128.1|2656745_2659631_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_001297537.1|2659730_2661650_-	PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR	NA	NA	NA	NA	NA
WP_000733707.1|2661877_2662948_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA	NA
WP_001297535.1|2662958_2663591_+	dihydroxyacetone kinase ADP-binding subunit DhaL	NA	NA	NA	NA	NA
WP_001297541.1|2663601_2665020_+	dihydroxyacetone kinase subunit DhaM	NA	NA	NA	NA	NA
WP_000841709.1|2665339_2667037_+	alpha,alpha-trehalase	NA	NA	NA	NA	NA
WP_000615067.1|2667115_2667556_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000511313.1|2667733_2667988_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_000020161.1|2668188_2668923_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_001295616.1|2668924_2669536_-	membrane-bound lytic murein transglycosylase EmtA	NA	NA	NA	NA	NA
WP_000051548.1|2669635_2670550_+	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_000340206.1|2670644_2672381_+	potassium/proton antiporter	NA	NA	NA	NA	NA
WP_000197840.1|2672766_2673837_-	catabolic alanine racemase DadX	NA	NA	NA	NA	NA
WP_001266908.1|2673846_2675145_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_001542842.1|2675474_2677007_+	SpoVR family protein	NA	NA	NA	NA	NA
2676061:2676076	attL	AAGAAGAGAAAGCCCG	NA	NA	NA	NA
WP_000234823.1|2677058_2677778_-	fatty acid metabolism transcriptional regulator FadR	NA	NA	NA	NA	NA
WP_174190283.1|2677999_2679541_+	Na(+)/H(+) antiporter NhaB	NA	NA	NA	NA	NA
WP_174190284.1|2679686_2680217_+	disulfide bond formation protein DsbB	NA	NA	NA	NA	NA
WP_000457616.1|2680262_2681531_-	DNA polymerase V catalytic protein	NA	I6RSM4	Salmonella_phage	83.4	7.9e-210
WP_000897378.1|2681530_2681950_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	62.1	6.9e-38
WP_000807626.1|2683439_2683901_-	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
WP_000284276.1|2683977_2684637_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_001297679.1|2684708_2685002_-	YcgL domain-containing protein	NA	NA	NA	NA	NA
WP_000695223.1|2685243_2685645_+	PPC domain-containing protein	NA	NA	NA	NA	NA
WP_001056831.1|2685764_2686133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000072536.1|2686652_2687348_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_000101055.1|2687371_2688184_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_001185665.1|2688187_2688454_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_001131446.1|2689204_2689324_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001325743.1|2689284_2689470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000122462.1|2689570_2689744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001304448.1|2689805_2690090_+	glycine zipper family protein	NA	NA	NA	NA	NA
WP_000979977.1|2690093_2690429_+	YmgD family protein	NA	NA	NA	NA	NA
WP_001695883.1|2690485_2692807_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	A0A2L1IV18	Escherichia_phage	43.0	3.0e-90
WP_001297677.1|2692923_2693133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001065861.1|2693532_2693751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001246498.1|2693882_2695406_-	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA	NA
WP_001065752.1|2695737_2695986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000888772.1|2696098_2696365_-	biofilm/acid-resistance regulator AriR	NA	NA	NA	NA	NA
WP_000857995.1|2696393_2696666_-	two-component-system connector protein YmgA	NA	NA	NA	NA	NA
WP_000554144.1|2696708_2696945_-	two-component-system connector protein YcgZ	NA	NA	NA	NA	NA
WP_001299269.1|2697258_2698470_+	blue light-responsive regulator BluF	NA	NA	NA	NA	NA
WP_000332303.1|2698674_2699406_+	DNA-binding transcriptional repressor BluR	NA	Q9EYF2	Enterobacteria_phage	50.5	2.7e-53
WP_000373101.1|2699626_2700031_+	DUF1398 domain-containing protein	NA	NA	NA	NA	NA
WP_032141808.1|2700083_2700194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001307134.1|2700726_2701050_+	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	65.4	8.0e-42
WP_000539892.1|2701152_2701305_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	100.0	1.6e-21
WP_001028881.1|2701785_2702520_-	DUF3800 domain-containing protein	NA	NA	NA	NA	NA
WP_077783208.1|2703013_2703244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039022691.1|2704088_2705291_+	DUF4236 domain-containing protein	NA	NA	NA	NA	NA
WP_039022689.1|2706392_2706977_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	93.3	2.8e-101
WP_174190285.1|2706976_2709892_-|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A2D1UII2	Escherichia_phage	97.4	6.5e-58
WP_001230362.1|2709956_2710556_-	Ail/Lom family outer membrane beta-barrel protein	NA	A0A0P0ZCF6	Stx2-converting_phage	97.0	3.7e-109
WP_086660533.1|2710622_2714021_-	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	90.4	0.0e+00
WP_122985472.1|2714080_2714713_-|tail	tail assembly protein	tail	A0A2R9YJH6	Escherichia_phage	95.7	5.0e-96
WP_086660534.1|2714649_2715393_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	96.8	6.6e-148
WP_001388825.1|2715398_2716097_-|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	98.3	2.4e-131
WP_000847373.1|2716096_2716426_-|tail	phage tail protein	tail	A0A0K2FIE9	Enterobacteria_phage	99.1	2.1e-58
WP_033561711.1|2716422_2719002_-|tail	phage tail tape measure protein	tail	A0A2R9YJM8	Escherichia_phage	97.3	0.0e+00
WP_000459457.1|2718994_2719429_-|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	100.0	6.9e-65
WP_000479142.1|2719410_2719833_-|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	96.4	1.1e-70
WP_001358372.1|2719848_2720589_-|tail	phage tail protein	tail	A0A0K2FJ05	Enterobacteria_phage	98.0	1.4e-129
WP_000683105.1|2720596_2720992_-|tail	tail protein	tail	A0A0K2FIF4	Enterobacteria_phage	100.0	1.0e-70
WP_086660535.1|2720988_2721567_-|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	98.4	1.1e-78
WP_000785282.1|2721578_2721932_-|head,tail	head-tail joining protein	head,tail	A0A2R9YJJ5	Escherichia_phage	97.4	6.4e-61
WP_086660536.1|2721943_2722339_-	DNA-packaging protein FI	NA	A0A2R9YJP4	Escherichia_phage	95.5	2.0e-58
WP_000063254.1|2722380_2723406_-|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	98.2	2.8e-189
WP_001358225.1|2723461_2723794_-|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	98.2	2.5e-54
WP_000123248.1|2723803_2725123_-	S49 family peptidase	NA	A0A2I6TC87	Escherichia_phage	98.6	1.8e-233
WP_001345555.1|2725103_2726705_-|portal	phage portal protein	portal	A0A0K2FJC0	Enterobacteria_phage	99.4	1.3e-310
WP_000198149.1|2726701_2726908_-	gpW family protein	NA	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
WP_086660537.1|2726904_2728830_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	99.8	0.0e+00
WP_174190286.1|2728804_2729350_-	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	99.4	6.2e-95
WP_001415975.1|2729738_2729933_+	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	96.9	4.3e-27
WP_000738423.1|2730292_2730586_+	increased serum survival lipoprotein Iss	NA	K7PL54	Enterobacteria_phage	91.8	2.0e-44
WP_001228695.1|2730676_2730859_-|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.3	2.9e-17
WP_039022779.1|2731075_2731573_-	lysozyme RrrD	NA	M1FJA0	Enterobacteria_phage	96.4	2.7e-89
WP_000839596.1|2731572_2731788_-|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	100.0	9.0e-34
WP_000737283.1|2732376_2733474_+	porin OmpC	NA	Q1MVN1	Enterobacteria_phage	76.3	4.8e-155
WP_001204780.1|2733662_2734046_-	antitermination protein QuuD	NA	A0A088CD47	Shigella_phage	84.2	4.0e-56
WP_000971055.1|2734131_2734272_-	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	69.8	1.1e-08
WP_001099712.1|2734268_2734631_-	crossover junction endodeoxyribonuclease RusA	NA	K7PM48	Enterobacteria_phage	96.5	4.3e-60
WP_000774484.1|2734627_2734918_-	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	93.8	4.3e-47
WP_000224916.1|2734910_2735081_-	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	67.9	1.5e-12
WP_089664639.1|2735080_2735536_-	DNA base-flipping protein YbcN	NA	I6PD71	Cronobacter_phage	66.2	3.5e-59
WP_073978393.1|2735532_2735634_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039022781.1|2735746_2736379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157898453.1|2736375_2736552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039022782.1|2736714_2737419_-	hypothetical protein	NA	H6WRU8	Salmonella_phage	46.2	4.6e-42
WP_113368015.1|2737408_2737567_-	Arc family DNA-binding protein	NA	A0A077KAX5	Edwardsiella_phage	65.3	1.8e-10
WP_039022783.1|2738012_2738492_+	hypothetical protein	NA	A0A077K9U2	Edwardsiella_phage	38.0	1.0e-16
WP_039022784.1|2738637_2739060_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_039022785.1|2739383_2740085_-	Replication protein P	NA	M1FJ72	Enterobacteria_phage	97.4	4.6e-127
WP_000147957.1|2740081_2741101_-	replication protein	NA	A0A0M5M7Y1	Salmonella_phage	63.8	4.4e-110
WP_001182871.1|2741097_2741637_-	hypothetical protein	NA	M9NZI6	Enterobacteria_phage	66.1	1.5e-61
WP_001067458.1|2741706_2741937_-	helix-turn-helix domain-containing protein	NA	A0A2H4FNF3	Salmonella_phage	68.0	1.5e-21
WP_000259988.1|2741975_2742731_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	75.0	1.8e-92
WP_000392636.1|2742826_2743552_+	serine/threonine protein kinase	NA	V5LSC6	Emiliania_huxleyi_virus	22.8	3.8e-07
WP_000623547.1|2743548_2744292_+	serine/threonine-protein phosphatase	NA	I6PCV8	Cronobacter_phage	45.9	1.9e-54
WP_000233576.1|2744772_2744979_+	phage encoded cell division inhibitor protein	NA	K7P6H3	Enterobacteria_phage	85.3	3.2e-28
WP_000995433.1|2745054_2745351_+	host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	99.0	6.2e-49
WP_000100847.1|2745356_2746142_+	phage recombination protein Bet	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
WP_174190287.1|2746138_2746819_+	YqaJ viral recombinase family protein	NA	Q6H9Z0	Enterobacteria_phage	99.1	3.0e-131
WP_000682318.1|2746815_2746998_+	DUF1317 domain-containing protein	NA	A0A0N7CHV0	Escherichia_phage	98.3	1.3e-28
WP_000548519.1|2746970_2747162_+	DUF1382 family protein	NA	A0A0P0ZC67	Stx2-converting_phage	98.4	2.8e-26
WP_001386642.1|2747172_2747454_+	cell division protein ZapA	NA	A0A0P0ZE02	Stx2-converting_phage	98.9	5.5e-47
WP_000763387.1|2747552_2747771_+	TraR/DksA family transcriptional regulator	NA	M1FQT7	Enterobacteria_phage	98.6	1.7e-35
WP_000488406.1|2747818_2748058_+	DUF4222 domain-containing protein	NA	M1FPC8	Enterobacteria_phage	94.9	3.9e-38
WP_000088653.1|2748197_2748434_+	excisionase	NA	NA	NA	NA	NA
WP_000741335.1|2748423_2749566_+|integrase	phage integrase Arm DNA-binding domain-containing protein	integrase	Q77Z02	Phage_21	100.0	3.6e-206
WP_000444487.1|2749679_2750930_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	100.0	3.8e-23
WP_001248691.1|2751101_2751755_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_000476093.1|2751764_2752226_+	phosphatase NudJ	NA	NA	NA	NA	NA
WP_001297484.1|2752279_2753386_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
2755355:2755370	attR	AAGAAGAGAAAGCCCG	NA	NA	NA	NA
>prophage 5
NZ_CP051765	Escherichia coli strain SCU-113 chromosome, complete genome	4765874	3680382	3728043	4765874	plate,transposase	Clostridioides_phage(16.67%)	43	NA	NA
WP_000006256.1|3680382_3680880_-|transposase	REP-associated tyrosine transposase RayT	transposase	NA	NA	NA	NA
WP_001402037.1|3681055_3681805_-	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	37.7	2.6e-19
WP_001225679.1|3682105_3682846_+	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_032283006.1|3682816_3683584_-	class II glutamine amidotransferase	NA	NA	NA	NA	NA
WP_000284050.1|3683792_3684371_-	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	32.0	1.1e-14
WP_000973082.1|3684610_3687055_+	acyl-CoA dehydrogenase FadE	NA	NA	NA	NA	NA
WP_000532698.1|3687097_3687571_-	C-lysozyme inhibitor	NA	NA	NA	NA	NA
WP_046788500.1|3687724_3688495_+	2-oxoglutaramate amidase	NA	NA	NA	NA	NA
WP_001366128.1|3688802_3689534_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	38.6	7.6e-40
WP_000917883.1|3689598_3690066_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	58.7	1.0e-50
WP_001295200.1|3690062_3690785_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_001052707.1|3690818_3691574_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_000644685.1|3691645_3693004_+	murein transglycosylase D	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	36.0	5.8e-09
WP_023155852.1|3693051_3693822_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_001230983.1|3693899_3694700_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_023155851.1|3694940_3695855_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001724736.1|3696032_3697169_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_001402130.1|3697625_3698009_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001402129.1|3698168_3702680_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_001402128.1|3702710_3703142_-	DUF1795 domain-containing protein	NA	NA	NA	NA	NA
WP_032283003.1|3703169_3705389_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_100224276.1|3705413_3705761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077250254.1|3705781_3706348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024170797.1|3706564_3707341_-	DUF2094 domain-containing protein	NA	NA	NA	NA	NA
WP_063610412.1|3707340_3711207_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_000522897.1|3711206_3711452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032283000.1|3711502_3712177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001402123.1|3712182_3713499_-	type VI secretion system protein TssL	NA	NA	NA	NA	NA
WP_000118770.1|3713495_3714839_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_001402122.1|3714842_3715376_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_000119441.1|3715443_3715929_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_000871595.1|3716042_3716414_-	type VI secretion system amidase immunity protein Tai4	NA	NA	NA	NA	NA
WP_000533466.1|3716410_3716896_-	type VI secretion system amidase effector protein Tae4	NA	NA	NA	NA	NA
WP_000245849.1|3716948_3718463_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_000996814.1|3718487_3719033_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_000144225.1|3719094_3719385_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001402121.1|3719387_3719951_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001542643.1|3719963_3722597_-	type VI secretion system ATPase TssH	NA	A0A2I7SAX5	Vibrio_phage	32.8	2.5e-80
WP_001402119.1|3722929_3723844_+	type VI secretion system-associated protein TagK	NA	NA	NA	NA	NA
WP_001402118.1|3723830_3724661_+	impE family protein	NA	NA	NA	NA	NA
WP_001402117.1|3724657_3725152_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_001402116.1|3725167_3727051_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_001402115.1|3727047_3728043_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 6
NZ_CP051765	Escherichia coli strain SCU-113 chromosome, complete genome	4765874	4179875	4237662	4765874	protease,transposase	Klosneuvirus(11.11%)	60	NA	NA
WP_001162171.1|4179875_4181228_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_000166270.1|4181321_4181873_+	ribosome-associated protein	NA	NA	NA	NA	NA
WP_114747573.1|4182028_4183402_-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_000853753.1|4183577_4184576_+	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	42.7	5.7e-70
WP_125083828.1|4184608_4185604_-	sugar ABC transporter permease YjfF	NA	NA	NA	NA	NA
WP_001296689.1|4185590_4186613_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000205800.1|4186626_4188129_-	sugar ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.3	3.1e-11
WP_000265933.1|4188268_4189225_-	galactofuranose ABC transporter substrate-binding protein YtfQ	NA	NA	NA	NA	NA
WP_000055075.1|4189534_4190065_+	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	63.3	1.2e-55
WP_000239576.1|4190144_4190495_-	endoribonuclease toxin ChpB	NA	NA	NA	NA	NA
WP_001223208.1|4190488_4190740_-	type II toxin-antitoxin system antitoxin ChpS	NA	NA	NA	NA	NA
WP_001219160.1|4190951_4191293_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_000060927.1|4191295_4195075_-	autotransporter assembly complex protein TamB	NA	NA	NA	NA	NA
WP_001269329.1|4195071_4196805_-	autotransporter assembly complex protein TamA	NA	NA	NA	NA	NA
WP_001295196.1|4197010_4197649_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000935042.1|4197971_4199315_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_000689228.1|4199376_4199583_-	DUF1107 domain-containing protein	NA	NA	NA	NA	NA
WP_000175289.1|4199907_4200465_+	YtfJ family protein	NA	NA	NA	NA	NA
WP_000886909.1|4200454_4201195_-	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA	NA
WP_174190313.1|4201384_4203328_+	2',3'-cyclic-nucleotide 2'-phosphodiesterase	NA	NA	NA	NA	NA
WP_001542597.1|4203456_4203837_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000560563.1|4203925_4204786_+	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA	NA
WP_001296686.1|4204893_4205859_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000331456.1|4205966_4206629_+	iron-sulfur cluster repair protein YtfE	NA	NA	NA	NA	NA
WP_000228346.1|4206673_4208086_-	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA	NA
WP_000211225.1|4208394_4209015_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_001119478.1|4209233_4209872_+	cell division protein YtfB	NA	NA	NA	NA	NA
WP_072056505.1|4210006_4211215_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SL42	Escherichia_phage	93.3	2.7e-207
WP_046788396.1|4211222_4211837_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	59.1	1.8e-42
WP_157839724.1|4211882_4212038_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196062.1|4213143_4213593_-	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_000135199.1|4213634_4213862_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_001296681.1|4213866_4214181_-	primosomal replication protein N	NA	NA	NA	NA	NA
WP_001216676.1|4214187_4214583_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_000492914.1|4214909_4215185_+	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
WP_001170792.1|4215313_4216000_-	L-ribulose-5-phosphate 4-epimerase UlaF	NA	NA	NA	NA	NA
WP_001402799.1|4215999_4216854_-	L-ribulose-5-phosphate 3-epimerase UlaE	NA	NA	NA	NA	NA
WP_000056760.1|4216863_4217514_-	3-keto-L-gulonate-6-phosphate decarboxylase UlaD	NA	NA	NA	NA	NA
WP_000776505.1|4217527_4217992_-	PTS ascorbate transporter subunit IIA	NA	NA	NA	NA	NA
WP_000218360.1|4218001_4218307_-	PTS ascorbate transporter subunit IIB	NA	NA	NA	NA	NA
WP_001300695.1|4218322_4219720_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA	NA
WP_001295191.1|4220074_4221139_+	L-ascorbate 6-phosphate lactonase	NA	NA	NA	NA	NA
WP_000133631.1|4221246_4222002_+	HTH-type transcriptional regulator UlaR	NA	NA	NA	NA	NA
WP_000569728.1|4221998_4222748_-	esterase	NA	NA	NA	NA	NA
WP_000254636.1|4222929_4223259_+	biofilm peroxide resistance protein BsmA	NA	NA	NA	NA	NA
WP_000811566.1|4223407_4223683_+|protease	protease activator YjfN	protease	NA	NA	NA	NA
WP_001339483.1|4223799_4225425_-	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_000943976.1|4225508_4226672_-	glutathionylspermidine synthase family protein	NA	B2ZXR7	Ralstonia_phage	43.5	1.3e-81
WP_000101649.1|4226674_4227313_-	DUF1190 domain-containing protein	NA	NA	NA	NA	NA
WP_000547760.1|4227322_4227721_-	DUF350 domain-containing protein	NA	NA	NA	NA	NA
WP_000012553.1|4227738_4228398_-	YjfK family protein	NA	NA	NA	NA	NA
WP_000511955.1|4228448_4229147_-	PspA/IM30 family protein	NA	NA	NA	NA	NA
WP_000220137.1|4229165_4229567_-	DUF2170 family protein	NA	NA	NA	NA	NA
WP_001293282.1|4229693_4230425_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000076316.1|4230604_4233046_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	33.1	6.4e-67
WP_001177639.1|4233084_4233510_-	nitric oxide-sensing transcriptional repressor NsrR	NA	NA	NA	NA	NA
WP_000527955.1|4233714_4235013_-	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	35.9	2.2e-66
WP_001089295.1|4235116_4235314_-	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
WP_001232412.1|4235395_4236400_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_000312488.1|4236402_4237662_-|protease	FtsH protease activity modulator HflK	protease	A0A1L2CVV0	Pectobacterium_phage	25.5	3.6e-05
