assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013285285.1_ASM1328528v1	NZ_CP054198	Glaesserella parasuis strain YHP170504 chromosome, complete genome	1	912197-912291	1	CRISPRCasFinder	no	c2c9_V-U4	cas3,PD-DExK,DEDDh,c2c9_V-U4,csa3,DinG	Type V-U4	GATGGTACAAAAGTAACATTAAAAGACCC	29	0	0	NA	NA	NA	1	1	TypeV-U4	cas3,PD-DExK,DEDDh,c2c9_V-U4,csa3,DinG	NA|131aa|up_0|NZ_CP054198.1_900871_901264_+,NA	NA|377aa|up_9|NZ_CP054198.1_888386_889517_-	TIGR02815, agaS_fam, putative sugar isomerase, AgaS family	NA|254aa|up_8|NZ_CP054198.1_889568_890330_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|306aa|up_7|NZ_CP054198.1_890670_891588_+	PRK00321, rdgC, recombination associated protein; Reviewed	NA|688aa|up_6|NZ_CP054198.1_891790_893854_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|352aa|up_5|NZ_CP054198.1_893837_894893_+	PRK11432, fbpC, ferric ABC transporter ATP-binding protein	NA|154aa|up_4|NZ_CP054198.1_895265_895727_+	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed	NA|511aa|up_3|NZ_CP054198.1_895741_897274_+	PRK09202, nusA, transcription elongation factor NusA; Validated	NA|868aa|up_2|NZ_CP054198.1_897291_899895_+	PRK05306, infB, translation initiation factor IF-2; Validated	NA|103aa|up_1|NZ_CP054198.1_900026_900335_-	TIGR02684, conserved_hypothetical_protein, probable addiction module antidote protein	NA|131aa|up_0|NZ_CP054198.1_900871_901264_+	NA	NA|297aa|down_0|NZ_CP054198.1_915093_915984_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|871aa|down_1|NZ_CP054198.1_916332_918945_+	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated	NA|213aa|down_2|NZ_CP054198.1_919049_919688_+	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain	c2c9_V-U4|439aa|down_3|NZ_CP054198.1_919674_920991_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|579aa|down_4|NZ_CP054198.1_921071_922808_-	COG3083, COG3083, Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only]	NA|75aa|down_5|NZ_CP054198.1_922809_923034_-	PRK13689, PRK13689, hypothetical protein; Provisional	NA|234aa|down_6|NZ_CP054198.1_923237_923939_-	PRK01723, PRK01723, 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	NA|219aa|down_7|NZ_CP054198.1_924053_924710_+	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|484aa|down_8|NZ_CP054198.1_924857_926309_+	PRK01269, PRK01269, tRNA s(4)U8 sulfurtransferase; Provisional	NA|454aa|down_9|NZ_CP054198.1_926331_927693_+	PRK09451, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
GCF_013285285.1_ASM1328528v1	NZ_CP054198	Glaesserella parasuis strain YHP170504 chromosome, complete genome	2	1096805-1096886	2	CRISPRCasFinder	no		cas3,PD-DExK,DEDDh,c2c9_V-U4,csa3,DinG	Orphan	ACTTCCCCCGCAAGCGGAGGAAG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,DEDDh,c2c9_V-U4,csa3,DinG	NA|181aa|up_2|NZ_CP054198.1_1092734_1093277_+,NA	NA|880aa|up_9|NZ_CP054198.1_1084144_1086784_+	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	NA|438aa|up_8|NZ_CP054198.1_1086876_1088190_+	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|70aa|up_7|NZ_CP054198.1_1088345_1088555_-	TIGR02381, Cold_shock-like_protein_CspD, cold shock domain protein CspD	NA|160aa|up_6|NZ_CP054198.1_1088760_1089240_+	PRK09437, bcp, thioredoxin-dependent thiol peroxidase; Reviewed	NA|190aa|up_5|NZ_CP054198.1_1089229_1089799_+	PRK08942, PRK08942, D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA|180aa|up_4|NZ_CP054198.1_1089937_1090477_+	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|692aa|up_3|NZ_CP054198.1_1090569_1092645_+	PRK11619, PRK11619, lytic murein transglycosylase; Provisional	NA|181aa|up_2|NZ_CP054198.1_1092734_1093277_+	NA	NA|296aa|up_1|NZ_CP054198.1_1093276_1094164_+	PRK09509, fieF, CDF family cation-efflux pump FieF	NA|329aa|up_0|NZ_CP054198.1_1095563_1096550_+	PRK05105, PRK05105, O-succinylbenzoate synthase; Provisional	NA|6365aa|down_0|NZ_CP054198.1_1096990_1116085_+	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll	NA|127aa|down_1|NZ_CP054198.1_1116161_1116542_-	pfam06062, UPF0231, Uncharacterized protein family (UPF0231)	NA|943aa|down_2|NZ_CP054198.1_1116625_1119454_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|173aa|down_3|NZ_CP054198.1_1119756_1120275_+	PRK06863, PRK06863, single-stranded DNA-binding protein; Provisional	NA|496aa|down_4|NZ_CP054198.1_1120427_1121915_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|407aa|down_5|NZ_CP054198.1_1121924_1123145_-	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional	NA|91aa|down_6|NZ_CP054198.1_1123208_1123481_-	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family	NA|93aa|down_7|NZ_CP054198.1_1123491_1123770_-	pfam05015, HigB-like_toxin, RelE-like toxin of type II toxin-antitoxin system HigB	NA|337aa|down_8|NZ_CP054198.1_1123918_1124929_+	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated	NA|114aa|down_9|NZ_CP054198.1_1125281_1125623_-	NF012196, Ig_like_ice, Ig-like domain-containing protein
GCF_013285285.1_ASM1328528v1	NZ_CP054198	Glaesserella parasuis strain YHP170504 chromosome, complete genome	3	2041268-2041357	3	CRISPRCasFinder	no		cas3,PD-DExK,DEDDh,c2c9_V-U4,csa3,DinG	Orphan	TAATTTTTCTGCTTCTGCTTTTTCTTT	27	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,DEDDh,c2c9_V-U4,csa3,DinG	NA,NA	NA|194aa|up_9|NZ_CP054198.1_2030030_2030612_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|341aa|up_8|NZ_CP054198.1_2030820_2031843_-	PRK09283, PRK09283, porphobilinogen synthase	NA|539aa|up_7|NZ_CP054198.1_2032022_2033639_+	pfam02646, RmuC, RmuC family	NA|188aa|up_6|NZ_CP054198.1_2033638_2034202_+	PRK06895, PRK06895, anthranilate synthase component II	NA|157aa|up_5|NZ_CP054198.1_2034376_2034847_+	TIGR02826, hypothetical_protein, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|594aa|up_4|NZ_CP054198.1_2034843_2036625_+	PRK08271, PRK08271, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|182aa|up_3|NZ_CP054198.1_2036649_2037195_-	PRK01736, PRK01736, hypothetical protein; Reviewed	NA|110aa|up_2|NZ_CP054198.1_2037269_2037599_+	PRK10972, PRK10972, cell division protein ZapA	NA|196aa|up_1|NZ_CP054198.1_2037847_2038435_+	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|471aa|up_0|NZ_CP054198.1_2038431_2039844_-	pfam04575, DUF560, Protein of unknown function (DUF560)	NA|122aa|down_0|NZ_CP054198.1_2041736_2042102_+	PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional	NA|127aa|down_1|NZ_CP054198.1_2042169_2042550_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|275aa|down_2|NZ_CP054198.1_2042883_2043708_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|429aa|down_3|NZ_CP054198.1_2043764_2045051_-	COG1114, BrnQ, Branched-chain amino acid permeases [Amino acid transport and metabolism]	NA|242aa|down_4|NZ_CP054198.1_2045167_2045893_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|312aa|down_5|NZ_CP054198.1_2046032_2046968_-	TIGR00128, Malonyl_CoA-acyl_carrier_protein_transacylase, malonyl CoA-acyl carrier protein transacylase	NA|249aa|down_6|NZ_CP054198.1_2047050_2047797_-	COG1636, COG1636, Uncharacterized protein conserved in bacteria [Function unknown]	NA|328aa|down_7|NZ_CP054198.1_2047897_2048881_-	PRK10888, PRK10888, octaprenyl diphosphate synthase; Provisional	NA|336aa|down_8|NZ_CP054198.1_2049083_2050091_-	PRK10864, PRK10864, putative methyltransferase; Provisional	NA|553aa|down_9|NZ_CP054198.1_2050221_2051880_-	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)
