assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013283915.1_ASM1328391v1	NZ_CP054136	Bacillus altitudinis strain 11-1-1 chromosome, complete genome	1	862799-863026	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7	csa3,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,DinG,cas3,WYL,RT	Type III-D,Type III-A,Type III-C,Type III-B, Type III-C?	GTCGCACTCTACATGAGTGCGTGGATTGAAAT,GTCGCACTCTACATGAGTGCGTGGATTGAAAT,GTCGCACTCTACATGAGTGCGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	2,3,3	3	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B,TypeIII-C?	csa3,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,DinG,cas3,WYL,RT	NA,PD-DExK|294aa|down_0|NZ_CP054136.1_863264_864146_+,NA|75aa|down_9|NZ_CP054136.1_874337_874562_-	NA|91aa|up_9|NZ_CP054136.1_853691_853964_+	pfam14043, WVELL, WVELL protein	NA|328aa|up_8|NZ_CP054136.1_854265_855249_+	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|865aa|up_7|NZ_CP054136.1_855336_857931_+	pfam09586, YfhO, Bacterial membrane protein YfhO	NA|378aa|up_6|NZ_CP054136.1_857955_859089_-	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]	NA|156aa|up_5|NZ_CP054136.1_859295_859763_+	pfam12867, DinB_2, DinB superfamily	NA|141aa|up_4|NZ_CP054136.1_859767_860190_-	pfam14184, YrvL, Regulatory protein YrvL	NA|388aa|up_3|NZ_CP054136.1_860257_861421_-	TIGR03404, Oxalate_decarboxylase_OxdC, bicupin, oxalate decarboxylase family	NA|55aa|up_2|NZ_CP054136.1_861515_861680_-	pfam12841, YvrJ, YvrJ protein family	NA|201aa|up_1|NZ_CP054136.1_861846_862449_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|74aa|up_0|NZ_CP054136.1_862396_862618_+	PRK14082, PRK14082, hypothetical protein; Provisional	PD-DExK|294aa|down_0|NZ_CP054136.1_863264_864146_+	NA	cmr1gr7|446aa|down_1|NZ_CP054136.1_864161_865499_+	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas10|604aa|down_2|NZ_CP054136.1_865468_867280_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr3gr5|411aa|down_3|NZ_CP054136.1_867272_868505_+	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3)	cmr4gr7|297aa|down_4|NZ_CP054136.1_868497_869388_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|123aa|down_5|NZ_CP054136.1_869384_869753_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|282aa|down_6|NZ_CP054136.1_869680_870526_+	COG1604, COG1604, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|327aa|down_7|NZ_CP054136.1_872078_873059_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|367aa|down_8|NZ_CP054136.1_873250_874351_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|75aa|down_9|NZ_CP054136.1_874337_874562_-	NA
GCF_013283915.1_ASM1328391v1	NZ_CP054136	Bacillus altitudinis strain 11-1-1 chromosome, complete genome	2	870701-870935	2,2	CRT,CRISPRCasFinder	no	PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7	csa3,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,DinG,cas3,WYL,RT	Type III-D,Type III-A,Type III-C,Type III-B, Type III-C?	CGTCGCACTCTACATGAGTGCGTGGATTGAAAT,GTCGCACTCTACATGAGTGCGTGGATTGAAAT	33,32	0	0	NA	NA	I-C:I-C	3,3	3	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B,TypeIII-C?	csa3,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,DinG,cas3,WYL,RT	PD-DExK|294aa|up_6|NZ_CP054136.1_863264_864146_+,NA|75aa|down_2|NZ_CP054136.1_874337_874562_-,NA|55aa|down_4|NZ_CP054136.1_875456_875621_+	NA|55aa|up_9|NZ_CP054136.1_861515_861680_-	pfam12841, YvrJ, YvrJ protein family	NA|201aa|up_8|NZ_CP054136.1_861846_862449_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|74aa|up_7|NZ_CP054136.1_862396_862618_+	PRK14082, PRK14082, hypothetical protein; Provisional	PD-DExK|294aa|up_6|NZ_CP054136.1_863264_864146_+	NA	cmr1gr7|446aa|up_5|NZ_CP054136.1_864161_865499_+	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas10|604aa|up_4|NZ_CP054136.1_865468_867280_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr3gr5|411aa|up_3|NZ_CP054136.1_867272_868505_+	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3)	cmr4gr7|297aa|up_2|NZ_CP054136.1_868497_869388_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|123aa|up_1|NZ_CP054136.1_869384_869753_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|282aa|up_0|NZ_CP054136.1_869680_870526_+	COG1604, COG1604, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|327aa|down_0|NZ_CP054136.1_872078_873059_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|367aa|down_1|NZ_CP054136.1_873250_874351_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|75aa|down_2|NZ_CP054136.1_874337_874562_-	NA	NA|251aa|down_3|NZ_CP054136.1_874643_875396_+	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL	NA|55aa|down_4|NZ_CP054136.1_875456_875621_+	NA	NA|87aa|down_5|NZ_CP054136.1_875795_876056_+	pfam14182, YgaB, YgaB-like protein	NA|177aa|down_6|NZ_CP054136.1_876203_876734_+	PRK13662, PRK13662, hypothetical protein; Provisional	NA|581aa|down_7|NZ_CP054136.1_876829_878572_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|341aa|down_8|NZ_CP054136.1_878684_879707_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|326aa|down_9|NZ_CP054136.1_879675_880653_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
GCF_013283915.1_ASM1328391v1	NZ_CP054136	Bacillus altitudinis strain 11-1-1 chromosome, complete genome	3	871241-871471	3	CRISPRCasFinder	no	PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7	csa3,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,DinG,cas3,WYL,RT	Type III-D,Type III-A,Type III-C,Type III-B, Type III-C?	GTCGCACTCTACATGAGTGCGTGGATTGAAAT	32	0	0	NA	NA	I-C	3	3	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B,TypeIII-C?	csa3,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,DinG,cas3,WYL,RT	PD-DExK|294aa|up_6|NZ_CP054136.1_863264_864146_+,NA|75aa|down_2|NZ_CP054136.1_874337_874562_-,NA|55aa|down_4|NZ_CP054136.1_875456_875621_+	NA|55aa|up_9|NZ_CP054136.1_861515_861680_-	pfam12841, YvrJ, YvrJ protein family	NA|201aa|up_8|NZ_CP054136.1_861846_862449_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|74aa|up_7|NZ_CP054136.1_862396_862618_+	PRK14082, PRK14082, hypothetical protein; Provisional	PD-DExK|294aa|up_6|NZ_CP054136.1_863264_864146_+	NA	cmr1gr7|446aa|up_5|NZ_CP054136.1_864161_865499_+	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas10|604aa|up_4|NZ_CP054136.1_865468_867280_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr3gr5|411aa|up_3|NZ_CP054136.1_867272_868505_+	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3)	cmr4gr7|297aa|up_2|NZ_CP054136.1_868497_869388_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|123aa|up_1|NZ_CP054136.1_869384_869753_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|282aa|up_0|NZ_CP054136.1_869680_870526_+	COG1604, COG1604, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|327aa|down_0|NZ_CP054136.1_872078_873059_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|367aa|down_1|NZ_CP054136.1_873250_874351_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|75aa|down_2|NZ_CP054136.1_874337_874562_-	NA	NA|251aa|down_3|NZ_CP054136.1_874643_875396_+	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL	NA|55aa|down_4|NZ_CP054136.1_875456_875621_+	NA	NA|87aa|down_5|NZ_CP054136.1_875795_876056_+	pfam14182, YgaB, YgaB-like protein	NA|177aa|down_6|NZ_CP054136.1_876203_876734_+	PRK13662, PRK13662, hypothetical protein; Provisional	NA|581aa|down_7|NZ_CP054136.1_876829_878572_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|341aa|down_8|NZ_CP054136.1_878684_879707_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|326aa|down_9|NZ_CP054136.1_879675_880653_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
GCF_013283915.1_ASM1328391v1	NZ_CP054136	Bacillus altitudinis strain 11-1-1 chromosome, complete genome	4	871759-871990	2,4,3	PILER-CR,CRISPRCasFinder,CRT	no	PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7	csa3,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,DinG,cas3,WYL,RT	Type III-D,Type III-A,Type III-C,Type III-B, Type III-C?	GTCGCACTCTACATGAGTGCGTGGATTGAAATT,GTCGCACTCTACATGAGTGCGTGGATTGAAAT,GTCGCACTCTACATGAGTGCGTGGATTGAAATT	33,32,33	0	0	NA	NA	I-C:I-C:I-C	2,3,3	3	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B,TypeIII-C?	csa3,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,DinG,cas3,WYL,RT	PD-DExK|294aa|up_6|NZ_CP054136.1_863264_864146_+,NA|75aa|down_2|NZ_CP054136.1_874337_874562_-,NA|55aa|down_4|NZ_CP054136.1_875456_875621_+	NA|55aa|up_9|NZ_CP054136.1_861515_861680_-	pfam12841, YvrJ, YvrJ protein family	NA|201aa|up_8|NZ_CP054136.1_861846_862449_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|74aa|up_7|NZ_CP054136.1_862396_862618_+	PRK14082, PRK14082, hypothetical protein; Provisional	PD-DExK|294aa|up_6|NZ_CP054136.1_863264_864146_+	NA	cmr1gr7|446aa|up_5|NZ_CP054136.1_864161_865499_+	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas10|604aa|up_4|NZ_CP054136.1_865468_867280_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr3gr5|411aa|up_3|NZ_CP054136.1_867272_868505_+	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3)	cmr4gr7|297aa|up_2|NZ_CP054136.1_868497_869388_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|123aa|up_1|NZ_CP054136.1_869384_869753_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|282aa|up_0|NZ_CP054136.1_869680_870526_+	COG1604, COG1604, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|327aa|down_0|NZ_CP054136.1_872078_873059_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|367aa|down_1|NZ_CP054136.1_873250_874351_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|75aa|down_2|NZ_CP054136.1_874337_874562_-	NA	NA|251aa|down_3|NZ_CP054136.1_874643_875396_+	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL	NA|55aa|down_4|NZ_CP054136.1_875456_875621_+	NA	NA|87aa|down_5|NZ_CP054136.1_875795_876056_+	pfam14182, YgaB, YgaB-like protein	NA|177aa|down_6|NZ_CP054136.1_876203_876734_+	PRK13662, PRK13662, hypothetical protein; Provisional	NA|581aa|down_7|NZ_CP054136.1_876829_878572_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|341aa|down_8|NZ_CP054136.1_878684_879707_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|326aa|down_9|NZ_CP054136.1_879675_880653_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
GCF_013283915.1_ASM1328391v1	NZ_CP054136	Bacillus altitudinis strain 11-1-1 chromosome, complete genome	5	2548568-2548650	5	CRISPRCasFinder	no		csa3,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,DinG,cas3,WYL,RT	Orphan	TTCATTTCATTTAGCGAGTAATT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,DEDDh,DinG,cas3,WYL,RT	NA|162aa|up_2|NZ_CP054136.1_2546210_2546696_+,NA	NA|414aa|up_9|NZ_CP054136.1_2538341_2539583_-	TIGR02907, Stage_VI_sporulation_protein_D, stage VI sporulation protein D	NA|431aa|up_8|NZ_CP054136.1_2539715_2541008_-	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase	NA|324aa|up_7|NZ_CP054136.1_2541035_2542007_-	PRK09283, PRK09283, porphobilinogen synthase	NA|264aa|up_6|NZ_CP054136.1_2542003_2542795_-	cd06578, HemD, Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme	NA|312aa|up_5|NZ_CP054136.1_2542791_2543727_-	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|277aa|up_4|NZ_CP054136.1_2543764_2544595_-	pfam01578, Cytochrom_C_asm, Cytochrome C assembly protein	NA|456aa|up_3|NZ_CP054136.1_2544602_2545970_-	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed	NA|162aa|up_2|NZ_CP054136.1_2546210_2546696_+	NA	NA|132aa|up_1|NZ_CP054136.1_2546921_2547317_-	COG4278, COG4278, Uncharacterized conserved protein [Function unknown]	NA|383aa|up_0|NZ_CP054136.1_2547317_2548466_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|196aa|down_0|NZ_CP054136.1_2548915_2549503_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|775aa|down_1|NZ_CP054136.1_2549499_2551824_-	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|554aa|down_2|NZ_CP054136.1_2551995_2553657_-	TIGR02902, Lon_protease_2, ATP-dependent protease LonB	NA|422aa|down_3|NZ_CP054136.1_2553796_2555062_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|425aa|down_4|NZ_CP054136.1_2555313_2556588_-	PRK01490, tig, trigger factor; Provisional	NA|336aa|down_5|NZ_CP054136.1_2556828_2557836_-	sd00006, TPR, Tetratricopeptide repeat	NA|200aa|down_6|NZ_CP054136.1_2557959_2558559_-	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit	NA|472aa|down_7|NZ_CP054136.1_2558574_2559990_-	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit	NA|366aa|down_8|NZ_CP054136.1_2560032_2561130_-	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional	NA|518aa|down_9|NZ_CP054136.1_2561148_2562702_-	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated
