assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013282335.1_ASM1328233v1	NZ_CP043406	Escherichia coli strain NMBU-W13E19 chromosome, complete genome	1	515565-515688	1	CRISPRCasFinder	no	DEDDh	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	NA,NA|30aa|down_7|NZ_CP043406.1_524585_524675_+	NA|471aa|up_9|NZ_CP043406.1_505018_506431_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP043406.1_506987_507197_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP043406.1_507652_508279_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP043406.1_508299_510402_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP043406.1_510414_511053_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP043406.1_511116_511785_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP043406.1_511781_512567_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP043406.1_512570_513383_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP043406.1_513394_514999_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP043406.1_515124_515430_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP043406.1_516003_517260_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP043406.1_517300_518674_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP043406.1_518888_519530_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP043406.1_519569_520718_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP043406.1_521008_522220_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP043406.1_522332_523265_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP043406.1_523261_524287_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP043406.1_524585_524675_+	NA	NA|390aa|down_8|NZ_CP043406.1_524840_526010_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP043406.1_526155_526737_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_013282335.1_ASM1328233v1	NZ_CP043406	Escherichia coli strain NMBU-W13E19 chromosome, complete genome	2	1303735-1303826	2	CRISPRCasFinder	no		DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	NA|70aa|up_9|NZ_CP043406.1_1292986_1293196_-,NA	NA|70aa|up_9|NZ_CP043406.1_1292986_1293196_-	NA	NA|1321aa|up_8|NZ_CP043406.1_1293250_1297213_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP043406.1_1297252_1297891_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP043406.1_1298178_1299270_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP043406.1_1299269_1299962_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP043406.1_1299973_1300360_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|271aa|up_3|NZ_CP043406.1_1300367_1301180_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP043406.1_1301176_1301767_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP043406.1_1301777_1302272_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|441aa|up_0|NZ_CP043406.1_1302292_1303615_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP043406.1_1304249_1304846_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP043406.1_1304866_1305094_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP043406.1_1305131_1306373_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP043406.1_1306665_1307922_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP043406.1_1308181_1309102_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP043406.1_1309101_1309407_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP043406.1_1309499_1310099_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP043406.1_1310095_1312642_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP043406.1_1312641_1313814_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP043406.1_1313943_1314636_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_013282335.1_ASM1328233v1	NZ_CP043406	Escherichia coli strain NMBU-W13E19 chromosome, complete genome	3	1431622-1431829	3,1	CRISPRCasFinder,PILER-CR	no		DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	Orphan	TTTCTAAGCTGCCTGTACGGCAGTGAAC,GATTTCTAAGCTGCCTGTACGGCAGTGAAC	28,30	0	0	NA	NA	I-F:I-F	3,2	3	Orphan	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	NA,NA	NA|431aa|up_9|NZ_CP043406.1_1416267_1417560_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP043406.1_1417650_1418994_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP043406.1_1419004_1419616_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1369aa|up_6|NZ_CP043406.1_1419774_1423881_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP043406.1_1424015_1424510_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP043406.1_1425055_1426021_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP043406.1_1426143_1427910_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP043406.1_1427910_1429632_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP043406.1_1429673_1430378_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP043406.1_1430662_1430881_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP043406.1_1432041_1434318_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP043406.1_1434348_1434669_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP043406.1_1434991_1435216_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP043406.1_1435287_1437234_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP043406.1_1437230_1438346_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP043406.1_1438496_1439453_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP043406.1_1439449_1441108_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP043406.1_1441533_1442229_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|NZ_CP043406.1_1442712_1443612_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|NZ_CP043406.1_1443755_1445408_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCF_013282335.1_ASM1328233v1	NZ_CP043406	Escherichia coli strain NMBU-W13E19 chromosome, complete genome	4	2135353-2135494	4	CRISPRCasFinder	no	RT	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	Unclear	TGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAC	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	NA|548aa|up_5|NZ_CP043406.1_2127322_2128966_+,NA|237aa|up_4|NZ_CP043406.1_2128934_2129645_+,NA	NA|181aa|up_9|NZ_CP043406.1_2122851_2123394_+	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins	NA|196aa|up_8|NZ_CP043406.1_2123468_2124056_+	pfam16449, MatB, Fimbrillin MatB	NA|223aa|up_7|NZ_CP043406.1_2124113_2124782_+	pfam18649, EcpB_C, EcpB C-terminal domain	NA|842aa|up_6|NZ_CP043406.1_2124807_2127333_+	pfam15976, CooC_C, CS1-pili formation C-terminal	NA|548aa|up_5|NZ_CP043406.1_2127322_2128966_+	NA	NA|237aa|up_4|NZ_CP043406.1_2128934_2129645_+	NA	NA|110aa|up_3|NZ_CP043406.1_2129958_2130288_+	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only]	NA|205aa|up_2|NZ_CP043406.1_2130536_2131151_-	COG3477, COG3477, Predicted periplasmic/secreted protein [Function unknown]	NA|80aa|up_1|NZ_CP043406.1_2131557_2131797_+	PRK11433, PRK11433, aldehyde oxidoreductase 2Fe-2S subunit; Provisional	RT|503aa|up_0|NZ_CP043406.1_2132335_2133844_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|698aa|down_0|NZ_CP043406.1_2135577_2137671_-	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|380aa|down_1|NZ_CP043406.1_2137654_2138794_-	PRK05702, flhB, flagellar type III secretion system protein FlhB	NA|261aa|down_2|NZ_CP043406.1_2138783_2139566_-	COG1684, FliR, Flagellar biosynthesis pathway, component FliR [Cell motility and secretion / Intracellular trafficking and secretion]	NA|91aa|down_3|NZ_CP043406.1_2139567_2139840_-	COG1987, FliQ, Flagellar biosynthesis pathway, component FliQ [Cell motility and secretion / Intracellular trafficking and secretion]	NA|251aa|down_4|NZ_CP043406.1_2139842_2140595_-	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed	NA|124aa|down_5|NZ_CP043406.1_2140591_2140963_-	TIGR02480, Flagellar_motor_switch_protein_FliN, flagellar motor switch protein FliN	NA|284aa|down_6|NZ_CP043406.1_2140955_2141807_-	pfam01052, FliMN_C, Type III flagellar switch regulator (C-ring) FliN C-term	NA|327aa|down_7|NZ_CP043406.1_2142194_2143175_+	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|114aa|down_8|NZ_CP043406.1_2143189_2143531_+	pfam02049, FliE, Flagellar hook-basal body complex protein FliE	NA|549aa|down_9|NZ_CP043406.1_2143535_2145182_+	PRK07193, fliF, flagellar MS-ring protein; Reviewed
GCF_013282335.1_ASM1328233v1	NZ_CP043406	Escherichia coli strain NMBU-W13E19 chromosome, complete genome	5	2437084-2437216	2	PILER-CR	no		DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	Orphan	ATCACCAATATTGAAAA	17	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	NA,NA	NA|126aa|up_9|NZ_CP043406.1_2427787_2428165_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|281aa|up_8|NZ_CP043406.1_2428171_2429014_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|up_7|NZ_CP043406.1_2429091_2429571_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP043406.1_2429762_2431625_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP043406.1_2431617_2432148_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP043406.1_2432255_2433587_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP043406.1_2433645_2433933_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP043406.1_2433929_2435216_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP043406.1_2435266_2436208_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP043406.1_2436222_2436993_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP043406.1_2437465_2438980_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP043406.1_2439010_2440153_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP043406.1_2440281_2441499_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP043406.1_2441572_2443126_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP043406.1_2443234_2444020_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP043406.1_2444025_2444616_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP043406.1_2444821_2445217_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1073aa|down_7|NZ_CP043406.1_2445477_2448696_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP043406.1_2448713_2449862_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP043406.1_2450317_2451139_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_013282335.1_ASM1328233v1	NZ_CP043406	Escherichia coli strain NMBU-W13E19 chromosome, complete genome	6	2521912-2522076	5	CRISPRCasFinder	no		DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	Orphan	CCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCAAACCTGCACGTTAG	54	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	NA,NA	NA|288aa|up_9|NZ_CP043406.1_2512844_2513708_+	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family	NA|260aa|up_8|NZ_CP043406.1_2514226_2515006_-	PRK11449, PRK11449, metal-dependent hydrolase	NA|358aa|up_7|NZ_CP043406.1_2515002_2516076_-	COG4667, COG4667, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|54aa|up_6|NZ_CP043406.1_2516197_2516359_-	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|202aa|up_5|NZ_CP043406.1_2516485_2517091_-	PRK10568, PRK10568, molecular chaperone OsmY	NA|530aa|up_4|NZ_CP043406.1_2517483_2519073_-	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|226aa|up_3|NZ_CP043406.1_2519163_2519841_-	PRK09449, PRK09449, dUMP phosphatase; Provisional	NA|149aa|up_2|NZ_CP043406.1_2519855_2520302_-	PRK09491, rimI, ribosomal-protein-alanine N-acetyltransferase; Provisional	NA|138aa|up_1|NZ_CP043406.1_2520270_2520684_-	PRK06856, PRK06856, DNA polymerase III subunit psi; Validated	NA|344aa|up_0|NZ_CP043406.1_2520786_2521818_+	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA|79aa|down_0|NZ_CP043406.1_2522557_2522794_-	pfam07256, DUF1435, Protein of unknown function (DUF1435)	NA|263aa|down_1|NZ_CP043406.1_2522934_2523723_+	PRK10647, PRK10647, ferric iron reductase involved in ferric hydroximate transport; Provisional	NA|226aa|down_2|NZ_CP043406.1_2523760_2524438_-	PRK11475, PRK11475, DNA-binding transcriptional activator BglJ; Provisional	NA|242aa|down_3|NZ_CP043406.1_2524395_2525121_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|257aa|down_4|NZ_CP043406.1_2525739_2526510_+	COG2966, COG2966, Uncharacterized conserved protein [Function unknown]	NA|158aa|down_5|NZ_CP043406.1_2526500_2526974_+	PRK09917, PRK09917, threonine/serine exporter	NA|180aa|down_6|NZ_CP043406.1_2527080_2527620_+	PRK02854, PRK02854, primosomal protein DnaT	NA|246aa|down_7|NZ_CP043406.1_2527622_2528360_+	PRK07952, PRK07952, DNA replication protein DnaC; Validated	NA|165aa|down_8|NZ_CP043406.1_2528408_2528903_+	PRK11667, PRK11667, hypothetical protein; Provisional	NA|764aa|down_9|NZ_CP043406.1_2529156_2531448_+	PRK03776, PRK03776, phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase
GCF_013282335.1_ASM1328233v1	NZ_CP043406	Escherichia coli strain NMBU-W13E19 chromosome, complete genome	7	2697592-2697729	6	CRISPRCasFinder	no		DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	Orphan	GAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGC	42	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	NA,NA|77aa|down_6|NZ_CP043406.1_2704756_2704987_-,NA|118aa|down_7|NZ_CP043406.1_2704973_2705327_-,NA|325aa|down_8|NZ_CP043406.1_2705342_2706317_-	NA|340aa|up_9|NZ_CP043406.1_2685756_2686776_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|188aa|up_8|NZ_CP043406.1_2686779_2687343_-	PRK09825, idnK, gluconokinase	NA|344aa|up_7|NZ_CP043406.1_2687559_2688591_+	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional	NA|255aa|up_6|NZ_CP043406.1_2688614_2689379_+	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional	NA|440aa|up_5|NZ_CP043406.1_2689440_2690760_+	TIGR00791, Gluconate_permease, gluconate transporter	NA|333aa|up_4|NZ_CP043406.1_2690826_2691825_+	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|501aa|up_3|NZ_CP043406.1_2691902_2693405_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP043406.1_2693565_2694648_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP043406.1_2694647_2695748_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP043406.1_2696014_2697526_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP043406.1_2697781_2698225_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP043406.1_2698224_2701080_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP043406.1_2701135_2702332_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP043406.1_2702524_2703028_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP043406.1_2703073_2703490_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP043406.1_2703651_2704656_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|77aa|down_6|NZ_CP043406.1_2704756_2704987_-	NA	NA|118aa|down_7|NZ_CP043406.1_2704973_2705327_-	NA	NA|325aa|down_8|NZ_CP043406.1_2705342_2706317_-	NA	NA|151aa|down_9|NZ_CP043406.1_2706438_2706891_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]
GCF_013282335.1_ASM1328233v1	NZ_CP043406	Escherichia coli strain NMBU-W13E19 chromosome, complete genome	8	4375052-4375629	3,7,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	Unclear	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	9,9,9	9	Unclear	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	NA,NA	NA|434aa|up_9|NZ_CP043406.1_4362504_4363806_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP043406.1_4363853_4366088_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|264aa|up_7|NZ_CP043406.1_4366183_4366975_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP043406.1_4367202_4368840_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP043406.1_4368926_4370225_+	PRK00077, eno, enolase; Provisional	NA|305aa|up_4|NZ_CP043406.1_4370284_4371199_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP043406.1_4371195_4372344_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|298aa|up_2|NZ_CP043406.1_4372358_4373252_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|201aa|up_1|NZ_CP043406.1_4373265_4373868_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP043406.1_4374040_4374712_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP043406.1_4376267_4377746_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP043406.1_4377772_4379050_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP043406.1_4379368_4380154_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP043406.1_4380223_4381678_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP043406.1_4381699_4383109_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP043406.1_4383086_4383866_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP043406.1_4383862_4384723_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP043406.1_4384869_4385445_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP043406.1_4385461_4385722_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP043406.1_4385712_4386984_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_013282335.1_ASM1328233v1	NZ_CP043406	Escherichia coli strain NMBU-W13E19 chromosome, complete genome	9	4401332-4402337	4,8,2,5	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCGG	29,29,29,30	0	0	NA	NA	I-E:I-E:I-E:I-E	13,16,16,13	16	TypeI-E	DEDDh,cas14j,DinG,cas3,RT,c2c9_V-U4,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	NA,NA	NA|571aa|up_9|NZ_CP043406.1_4389541_4391254_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP043406.1_4391327_4392062_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_7|NZ_CP043406.1_4392326_4392479_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_6|NZ_CP043406.1_4392673_4395373_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_5|NZ_CP043406.1_4395470_4397033_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_4|NZ_CP043406.1_4397029_4397566_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_3|NZ_CP043406.1_4397580_4398636_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_2|NZ_CP043406.1_4398646_4399393_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_1|NZ_CP043406.1_4399374_4400025_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP043406.1_4400941_4401235_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP043406.1_4402417_4403455_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP043406.1_4403706_4404615_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP043406.1_4404616_4406044_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP043406.1_4406043_4406649_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP043406.1_4406698_4407022_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP043406.1_4407215_4407527_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP043406.1_4407545_4408256_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP043406.1_4408255_4408735_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP043406.1_4408731_4409781_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP043406.1_4409761_4410523_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
