assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	1	168983-169524	1	CRT	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTNCCNCCGTTGCCGCC	23	0	0	NA	NA	NA	7	7	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP054013.1_183624_183912_-,NA|87aa|down_9|NZ_CP054013.1_197032_197293_-	NA|282aa|up_9|NZ_CP054013.1_146507_147353_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP054013.1_147827_148268_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP054013.1_148301_149171_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP054013.1_149191_150202_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|215aa|up_5|NZ_CP054013.1_150474_151119_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP054013.1_151185_152415_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP054013.1_152697_154047_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP054013.1_154058_155198_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP054013.1_155194_155926_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|339aa|up_0|NZ_CP054013.1_165281_166298_-	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal	NA|86aa|down_0|NZ_CP054013.1_171494_171752_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP054013.1_172007_181481_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP054013.1_182106_182553_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP054013.1_182589_183330_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP054013.1_183624_183912_-	NA	NA|3717aa|down_5|NZ_CP054013.1_184248_195399_-	pfam00823, PPE, PPE family	NA|265aa|down_6|NZ_CP054013.1_195642_196437_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_7|NZ_CP054013.1_196518_196890_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_8|NZ_CP054013.1_196787_197006_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_9|NZ_CP054013.1_197032_197293_-	NA
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	2	377021-379115	2	CRT	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CNNCGGCGGCNCCGGCGGCNNCGGCGGNNNCGGCGGC	37	4	14	377058-377152|377058-377152|377058-377152|377190-377263|377190-377263|377190-377263|377955-377989|377955-377989|377955-377989|377955-377989|377955-377989|378846-378871|378846-378871|378846-378871	NZ_CP054013.1_376356-376450|NZ_CP054013.1_376707-376801|NZ_CP054013.1_376005-376099|NZ_CP054013.1_376137-376210|NZ_CP054013.1_376488-376561|NZ_CP054013.1_376839-376912|NZ_CP054013.1_375951-375985|NZ_CP054013.1_376293-376327|NZ_CP054013.1_376644-376678|NZ_CP054013.1_376995-377029|NZ_CP054013.1_361109-361143|NZ_CP054013.1_370139-370164|NZ_CP054013.1_370475-370500|NZ_CP054013.1_370821-370846	NA	24	24	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP054013.1_382429_383269_+	NA|401aa|up_9|NZ_CP054013.1_350775_351978_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_8|NZ_CP054013.1_352002_353124_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_7|NZ_CP054013.1_353194_354703_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|516aa|up_6|NZ_CP054013.1_365757_367305_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_5|NZ_CP054013.1_367301_368138_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|715aa|up_4|NZ_CP054013.1_368497_370642_+	pfam00934, PE, PE family	NA|470aa|up_3|NZ_CP054013.1_370528_371938_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|363aa|up_2|NZ_CP054013.1_371977_373066_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|270aa|up_1|NZ_CP054013.1_373033_373843_+	PHA03169, PHA03169, hypothetical protein; Provisional	NA|219aa|up_0|NZ_CP054013.1_373971_374628_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP054013.1_379822_381469_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP054013.1_381542_382334_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP054013.1_382429_383269_+	NA	NA|399aa|down_3|NZ_CP054013.1_383323_384520_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP054013.1_384548_385259_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP054013.1_385323_386367_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP054013.1_386519_387431_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP054013.1_387446_388511_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP054013.1_388527_389712_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP054013.1_389753_390785_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	3	539676-539764	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_6|NZ_CP054013.1_530262_531033_-,NA|233aa|up_0|NZ_CP054013.1_538780_539479_-,NA|126aa|down_6|NZ_CP054013.1_544999_545377_+	NA|388aa|up_9|NZ_CP054013.1_525933_527097_-	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|351aa|up_8|NZ_CP054013.1_527093_528146_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|288aa|up_7|NZ_CP054013.1_528644_529508_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_6|NZ_CP054013.1_530262_531033_-	NA	NA|549aa|up_5|NZ_CP054013.1_531029_532676_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_4|NZ_CP054013.1_532672_533536_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_3|NZ_CP054013.1_533528_534455_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_2|NZ_CP054013.1_534456_536082_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|652aa|up_1|NZ_CP054013.1_536789_538745_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP054013.1_538780_539479_-	NA	NA|173aa|down_0|NZ_CP054013.1_539824_540343_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP054013.1_540343_541327_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP054013.1_541319_542513_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP054013.1_542518_543340_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP054013.1_543471_544155_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP054013.1_544154_544892_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP054013.1_544999_545377_+	NA	NA|225aa|down_7|NZ_CP054013.1_545475_546150_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP054013.1_546255_547050_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP054013.1_547056_547512_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	4	1174119-1174231	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTCCCGTTGGCGCCGTTGCCGAACAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP054013.1_1173688_1173871_-,NA	NA|398aa|up_9|NZ_CP054013.1_1163866_1165060_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP054013.1_1165095_1166778_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP054013.1_1166794_1168990_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP054013.1_1169103_1170237_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP054013.1_1170233_1170854_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP054013.1_1170950_1171532_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP054013.1_1171461_1172187_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP054013.1_1172276_1173197_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP054013.1_1173236_1173665_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP054013.1_1173688_1173871_-	NA	NA|838aa|down_0|NZ_CP054013.1_1177088_1179602_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP054013.1_1179892_1181503_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP054013.1_1181526_1182435_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP054013.1_1182658_1184554_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP054013.1_1184550_1186167_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP054013.1_1186163_1190156_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP054013.1_1190152_1190461_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP054013.1_1190463_1192005_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP054013.1_1192053_1192347_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP054013.1_1192376_1192667_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	5	1175098-1175251	3	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTCCCGTTGGCGCCGTTGCCGAACAGC	27	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP054013.1_1173688_1173871_-,NA	NA|398aa|up_9|NZ_CP054013.1_1163866_1165060_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP054013.1_1165095_1166778_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP054013.1_1166794_1168990_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP054013.1_1169103_1170237_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP054013.1_1170233_1170854_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP054013.1_1170950_1171532_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP054013.1_1171461_1172187_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP054013.1_1172276_1173197_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP054013.1_1173236_1173665_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP054013.1_1173688_1173871_-	NA	NA|838aa|down_0|NZ_CP054013.1_1177088_1179602_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP054013.1_1179892_1181503_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP054013.1_1181526_1182435_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP054013.1_1182658_1184554_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP054013.1_1184550_1186167_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP054013.1_1186163_1190156_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP054013.1_1190152_1190461_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP054013.1_1190463_1192005_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP054013.1_1192053_1192347_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP054013.1_1192376_1192667_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	6	1175416-1175526	4	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTCCCGTTGGCGCCGTTGCCGAACAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP054013.1_1173688_1173871_-,NA	NA|398aa|up_9|NZ_CP054013.1_1163866_1165060_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP054013.1_1165095_1166778_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP054013.1_1166794_1168990_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP054013.1_1169103_1170237_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP054013.1_1170233_1170854_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP054013.1_1170950_1171532_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP054013.1_1171461_1172187_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP054013.1_1172276_1173197_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP054013.1_1173236_1173665_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP054013.1_1173688_1173871_-	NA	NA|838aa|down_0|NZ_CP054013.1_1177088_1179602_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP054013.1_1179892_1181503_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP054013.1_1181526_1182435_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP054013.1_1182658_1184554_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP054013.1_1184550_1186167_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP054013.1_1186163_1190156_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP054013.1_1190152_1190461_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP054013.1_1190463_1192005_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP054013.1_1192053_1192347_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP054013.1_1192376_1192667_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	7	1206992-1207690	5	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	1207280-1207321|1207355-1207387	NZ_CP054013.1_1215312-1215353|NZ_CP054013.1_1214127-1214159	NA	10	10	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP054013.1_1204004_1204307_+,NA|161aa|down_1|NZ_CP054013.1_1217101_1217584_-,NA|410aa|down_5|NZ_CP054013.1_1219700_1220930_+	NA|262aa|up_9|NZ_CP054013.1_1198699_1199485_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP054013.1_1199473_1200277_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP054013.1_1200286_1201684_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP054013.1_1201862_1203638_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP054013.1_1203780_1204008_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP054013.1_1204004_1204307_+	NA	NA|74aa|up_3|NZ_CP054013.1_1204354_1204576_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP054013.1_1204572_1204998_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP054013.1_1205133_1205766_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP054013.1_1205762_1206671_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP054013.1_1216442_1217114_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP054013.1_1217101_1217584_-	NA	NA|239aa|down_2|NZ_CP054013.1_1217641_1218358_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP054013.1_1218459_1219116_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP054013.1_1219185_1219677_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP054013.1_1219700_1220930_+	NA	NA|621aa|down_6|NZ_CP054013.1_1221084_1222947_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP054013.1_1223018_1223405_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|212aa|down_8|NZ_CP054013.1_1223407_1224043_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP054013.1_1224130_1225015_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	8	1532557-1532633	6	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|72aa|up_9|NZ_CP054013.1_1518241_1518457_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|136aa|up_8|NZ_CP054013.1_1518453_1518861_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_7|NZ_CP054013.1_1518920_1519607_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_6|NZ_CP054013.1_1519760_1522394_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_5|NZ_CP054013.1_1522416_1524804_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_4|NZ_CP054013.1_1524941_1525664_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_3|NZ_CP054013.1_1525660_1526458_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_2|NZ_CP054013.1_1526459_1527347_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_1|NZ_CP054013.1_1527352_1528567_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_0|NZ_CP054013.1_1529590_1531036_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP054013.1_1533768_1535319_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP054013.1_1535370_1535763_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP054013.1_1535759_1536017_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP054013.1_1536199_1537435_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP054013.1_1537685_1538099_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP054013.1_1538095_1538332_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP054013.1_1538435_1538942_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP054013.1_1539055_1539526_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP054013.1_1539569_1540331_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP054013.1_1540387_1540699_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	9	1681017-1681139	1	PILER-CR	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CGCCGGCACCGGCGGGGCCGGCGGGGCCGGCGGC	34	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|71aa|up_8|NZ_CP054013.1_1670232_1670445_+,NA|176aa|up_5|NZ_CP054013.1_1672307_1672835_+,NA|186aa|up_3|NZ_CP054013.1_1674417_1674975_-,NA|46aa|down_2|NZ_CP054013.1_1682268_1682406_-,NA|82aa|down_3|NZ_CP054013.1_1682564_1682810_+,NA|242aa|down_9|NZ_CP054013.1_1691272_1691998_-	NA|166aa|up_9|NZ_CP054013.1_1669738_1670236_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|71aa|up_8|NZ_CP054013.1_1670232_1670445_+	NA	NA|183aa|up_7|NZ_CP054013.1_1670593_1671142_+	TIGR03086, TIGR03086, TIGR03086 family protein	NA|269aa|up_6|NZ_CP054013.1_1671386_1672193_+	pfam10774, DUF4226, Domain of unknown function (DUF4226)	NA|176aa|up_5|NZ_CP054013.1_1672307_1672835_+	NA	NA|176aa|up_4|NZ_CP054013.1_1673512_1674040_+	pfam00934, PE, PE family	NA|186aa|up_3|NZ_CP054013.1_1674417_1674975_-	NA	NA|169aa|up_2|NZ_CP054013.1_1674971_1675478_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|49aa|up_1|NZ_CP054013.1_1675590_1675737_-	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|784aa|up_0|NZ_CP054013.1_1676232_1678584_+	pfam00934, PE, PE family	NA|86aa|down_0|NZ_CP054013.1_1681478_1681736_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|143aa|down_1|NZ_CP054013.1_1681759_1682188_+	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|46aa|down_2|NZ_CP054013.1_1682268_1682406_-	NA	NA|82aa|down_3|NZ_CP054013.1_1682564_1682810_+	NA	NA|295aa|down_4|NZ_CP054013.1_1682878_1683763_-	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|391aa|down_5|NZ_CP054013.1_1683773_1684946_-	cd01162, IBD, Isobutyryl-CoA dehydrogenase	NA|511aa|down_6|NZ_CP054013.1_1684952_1686485_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|585aa|down_7|NZ_CP054013.1_1686690_1688445_+	pfam00934, PE, PE family	NA|646aa|down_8|NZ_CP054013.1_1688634_1690572_-	pfam00823, PPE, PPE family	NA|242aa|down_9|NZ_CP054013.1_1691272_1691998_-	NA
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	10	1767152-1768099	3	CRT	no	csa3	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGNGCCGGCGGNNCCGGCGG	21	1	3	1767935-1767970|1767935-1767970|1767935-1767970	NZ_CP054013.1_2054283-2054318|NZ_CP054013.1_1515660-1515625|NZ_CP054013.1_3265893-3265858	NA	19	19	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP054013.1_1772109_1772661_-	NA|685aa|up_9|NZ_CP054013.1_1754788_1756843_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|390aa|up_8|NZ_CP054013.1_1757008_1758178_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP054013.1_1758265_1759282_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP054013.1_1759443_1760085_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP054013.1_1760165_1761221_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP054013.1_1761272_1761665_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP054013.1_1761722_1762145_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP054013.1_1762106_1762397_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP054013.1_1762501_1763407_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP054013.1_1763425_1764241_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|883aa|down_0|NZ_CP054013.1_1768368_1771017_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP054013.1_1771484_1772129_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP054013.1_1772109_1772661_-	NA	NA|218aa|down_3|NZ_CP054013.1_1772810_1773464_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_4|NZ_CP054013.1_1773534_1774563_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_5|NZ_CP054013.1_1775251_1776022_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_6|NZ_CP054013.1_1776108_1776921_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_7|NZ_CP054013.1_1776988_1777849_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|431aa|down_8|NZ_CP054013.1_1778643_1779936_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|335aa|down_9|NZ_CP054013.1_1779919_1780924_+	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	11	1805113-1805364	2	PILER-CR	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CGGGTGGTGCCAGGTCGGCGGGCGCGGGTGGCGCCAGTTCGGCGGGCGCGGGTGGCGCCAGGT	63	1	1	1805286-1805341	NZ_CP054013.1_1805414-1805469	NA	2	2	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|67aa|up_3|NZ_CP054013.1_1803211_1803412_+,NA	NA|151aa|up_9|NZ_CP054013.1_1793809_1794262_+	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|398aa|up_8|NZ_CP054013.1_1794258_1795452_-	PRK07777, PRK07777, putative succinyldiaminopimelate transaminase DapC	NA|404aa|up_7|NZ_CP054013.1_1795608_1796820_+	PRK08242, PRK08242, acetyl-CoA C-acetyltransferase	NA|721aa|up_6|NZ_CP054013.1_1796824_1798987_+	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB	NA|550aa|up_5|NZ_CP054013.1_1799054_1800704_-	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|757aa|up_4|NZ_CP054013.1_1800873_1803144_-	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|67aa|up_3|NZ_CP054013.1_1803211_1803412_+	NA	NA|168aa|up_2|NZ_CP054013.1_1803421_1803925_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|161aa|up_1|NZ_CP054013.1_1803921_1804404_+	cd00886, MogA_MoaB, MogA_MoaB family	NA|142aa|up_0|NZ_CP054013.1_1804400_1804826_+	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|93aa|down_0|NZ_CP054013.1_1806514_1806793_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|361aa|down_1|NZ_CP054013.1_1806796_1807879_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|130aa|down_2|NZ_CP054013.1_1807875_1808265_-	PRK11770, PRK11770, YccF domain-containing protein	NA|136aa|down_3|NZ_CP054013.1_1808429_1808837_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|607aa|down_4|NZ_CP054013.1_1808955_1810776_-	pfam00934, PE, PE family	NA|651aa|down_5|NZ_CP054013.1_1811036_1812989_+	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase	NA|387aa|down_6|NZ_CP054013.1_1813077_1814238_-	COG4398, COG4398, Uncharacterized protein conserved in bacteria [Function unknown]	NA|163aa|down_7|NZ_CP054013.1_1814337_1814826_-	pfam10969, DUF2771, Protein of unknown function (DUF2771)	NA|549aa|down_8|NZ_CP054013.1_1814822_1816469_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|263aa|down_9|NZ_CP054013.1_1816606_1817395_+	pfam11228, DUF3027, Protein of unknown function (DUF3027)
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	12	2031850-2031958	7	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GACAGCCAGCCGGCTGACCCGCCGT	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|544aa|up_9|NZ_CP054013.1_2021217_2022849_+	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|355aa|up_8|NZ_CP054013.1_2022924_2023989_+	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|158aa|up_7|NZ_CP054013.1_2024041_2024515_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|up_6|NZ_CP054013.1_2024548_2025412_+	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|286aa|up_5|NZ_CP054013.1_2025416_2026274_+	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|361aa|up_4|NZ_CP054013.1_2026274_2027357_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|140aa|up_3|NZ_CP054013.1_2027437_2027857_-	pfam17301, LpqV, Putative lipoprotein LpqV	NA|189aa|up_2|NZ_CP054013.1_2027968_2028535_+	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|132aa|up_1|NZ_CP054013.1_2028531_2028927_+	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain	NA|668aa|up_0|NZ_CP054013.1_2028954_2030958_-	pfam00934, PE, PE family	NA|588aa|down_0|NZ_CP054013.1_2033043_2034807_-	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|258aa|down_1|NZ_CP054013.1_2034803_2035577_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|346aa|down_2|NZ_CP054013.1_2035588_2036626_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|279aa|down_3|NZ_CP054013.1_2036812_2037649_+	COG4760, COG4760, Predicted membrane protein [Function unknown]	NA|284aa|down_4|NZ_CP054013.1_2037764_2038616_+	pfam18741, MTES_1575, REase_MTES_1575	NA|406aa|down_5|NZ_CP054013.1_2038689_2039907_-	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|315aa|down_6|NZ_CP054013.1_2039959_2040904_-	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|298aa|down_7|NZ_CP054013.1_2041300_2042194_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|465aa|down_8|NZ_CP054013.1_2042250_2043645_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|down_9|NZ_CP054013.1_2043846_2044569_+	pfam06271, RDD, RDD family
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	13	2052484-2053340	8	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGTGTCGGCGGTGCCGGCGG	23	4	73	2052867-2052888|2052912-2052927|2053050-2053071|2053050-2053071|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185|2053167-2053185	NZ_CP054013.1_3804725-3804704|NZ_CP054013.1_2930719-2930704|NZ_CP054013.1_1677966-1677987|NZ_CP054013.1_2058178-2058199|NZ_CP054013.1_2054010-2054028|NZ_CP054013.1_2058151-2058169|NZ_CP054013.1_2058223-2058241|NZ_CP054013.1_1515324-1515306|NZ_CP054013.1_2471232-2471214|NZ_CP054013.1_2474058-2474040|NZ_CP054013.1_2832923-2832905|NZ_CP054013.1_2903647-2903629|NZ_CP054013.1_2904094-2904076|NZ_CP054013.1_2904193-2904175|NZ_CP054013.1_3646273-3646255|NZ_CP054013.1_3649801-3649783|NZ_CP054013.1_132085-132103|NZ_CP054013.1_230660-230678|NZ_CP054013.1_230843-230861|NZ_CP054013.1_231011-231029|NZ_CP054013.1_358823-358841|NZ_CP054013.1_360553-360571|NZ_CP054013.1_369637-369655|NZ_CP054013.1_523259-523277|NZ_CP054013.1_990710-990728|NZ_CP054013.1_1178957-1178975|NZ_CP054013.1_1464515-1464533|NZ_CP054013.1_1464737-1464755|NZ_CP054013.1_1680749-1680767|NZ_CP054013.1_1931514-1931532|NZ_CP054013.1_1932162-1932180|NZ_CP054013.1_2053539-2053557|NZ_CP054013.1_2053929-2053947|NZ_CP054013.1_2058571-2058589|NZ_CP054013.1_2843559-2843577|NZ_CP054013.1_3261719-3261737|NZ_CP054013.1_3537664-3537682|NZ_CP054013.1_3898761-3898779|NZ_CP054013.1_3898860-3898878|NZ_CP054013.1_165789-165771|NZ_CP054013.1_166413-166395|NZ_CP054013.1_166656-166638|NZ_CP054013.1_166789-166771|NZ_CP054013.1_460733-460715|NZ_CP054013.1_1174311-1174293|NZ_CP054013.1_1175730-1175712|NZ_CP054013.1_1176183-1176165|NZ_CP054013.1_1176234-1176216|NZ_CP054013.1_1176243-1176225|NZ_CP054013.1_1178532-1178514|NZ_CP054013.1_1178661-1178643|NZ_CP054013.1_1178928-1178910|NZ_CP054013.1_1179051-1179033|NZ_CP054013.1_1203582-1203564|NZ_CP054013.1_1283957-1283939|NZ_CP054013.1_1387301-1387283|NZ_CP054013.1_1514490-1514472|NZ_CP054013.1_1936220-1936202|NZ_CP054013.1_2329745-2329727|NZ_CP054013.1_2459196-2459178|NZ_CP054013.1_2459649-2459631|NZ_CP054013.1_2476778-2476760|NZ_CP054013.1_2476787-2476769|NZ_CP054013.1_2705066-2705048|NZ_CP054013.1_2705594-2705576|NZ_CP054013.1_2832197-2832179|NZ_CP054013.1_2930917-2930899|NZ_CP054013.1_3145612-3145594|NZ_CP054013.1_3199064-3199046|NZ_CP054013.1_3265806-3265788|NZ_CP054013.1_3411302-3411284|NZ_CP054013.1_3639588-3639570|NZ_CP054013.1_3640170-3640152	NA	16	16	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|89aa|up_3|NZ_CP054013.1_2047916_2048183_+,NA|61aa|down_3|NZ_CP054013.1_2055758_2055941_+,NA|35aa|down_4|NZ_CP054013.1_2056050_2056155_+	NA|465aa|up_9|NZ_CP054013.1_2042250_2043645_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|up_8|NZ_CP054013.1_2043846_2044569_+	pfam06271, RDD, RDD family	NA|389aa|up_7|NZ_CP054013.1_2044600_2045767_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|165aa|up_6|NZ_CP054013.1_2045837_2046332_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|145aa|up_5|NZ_CP054013.1_2046517_2046952_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|289aa|up_4|NZ_CP054013.1_2047053_2047920_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|89aa|up_3|NZ_CP054013.1_2047916_2048183_+	NA	NA|674aa|up_2|NZ_CP054013.1_2048169_2050191_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|243aa|up_1|NZ_CP054013.1_2050289_2051018_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|263aa|up_0|NZ_CP054013.1_2051128_2051917_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|107aa|down_0|NZ_CP054013.1_2054573_2054894_+	COG0020, UppS, Undecaprenyl pyrophosphate synthase [Lipid metabolism]	NA|145aa|down_1|NZ_CP054013.1_2055046_2055481_+	pfam00934, PE, PE family	NA|56aa|down_2|NZ_CP054013.1_2055579_2055747_+	smart00637, CBD_II, CBD_II domain	NA|61aa|down_3|NZ_CP054013.1_2055758_2055941_+	NA	NA|35aa|down_4|NZ_CP054013.1_2056050_2056155_+	NA	NA|152aa|down_5|NZ_CP054013.1_2056132_2056588_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|854aa|down_6|NZ_CP054013.1_2057002_2059564_+	pfam00934, PE, PE family	NA|313aa|down_7|NZ_CP054013.1_2059781_2060720_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|427aa|down_8|NZ_CP054013.1_2061107_2062388_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|276aa|down_9|NZ_CP054013.1_2062492_2063320_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	14	2412720-2413791	9	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	15	15	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP054013.1_2404483_2404801_+,NA	NA|103aa|up_9|NZ_CP054013.1_2401998_2402307_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP054013.1_2402303_2403923_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP054013.1_2404483_2404801_+	NA	NA|209aa|up_6|NZ_CP054013.1_2404935_2405562_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP054013.1_2405627_2405960_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP054013.1_2405975_2407232_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP054013.1_2407359_2408571_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP054013.1_2408643_2410122_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP054013.1_2410118_2411504_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP054013.1_2411581_2412616_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP054013.1_2414645_2415047_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP054013.1_2415043_2415301_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP054013.1_2415383_2416343_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP054013.1_2416367_2417330_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|246aa|down_4|NZ_CP054013.1_2417328_2418066_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP054013.1_2418146_2420114_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP054013.1_2420131_2420956_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP054013.1_2421124_2421607_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP054013.1_2421678_2422503_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP054013.1_2422699_2423638_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	15	2477356-2477582	3	PILER-CR	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CGGCGGCAACGGCGGCGCCGGCGGCAACGGCGCCAACGGCGCCGCCG	47	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|38aa|up_8|NZ_CP054013.1_2463657_2463771_-,NA|137aa|up_7|NZ_CP054013.1_2463820_2464231_-,NA|288aa|down_2|NZ_CP054013.1_2481420_2482284_+	NA|155aa|up_9|NZ_CP054013.1_2462740_2463205_-	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|38aa|up_8|NZ_CP054013.1_2463657_2463771_-	NA	NA|137aa|up_7|NZ_CP054013.1_2463820_2464231_-	NA	NA|248aa|up_6|NZ_CP054013.1_2464247_2464991_-	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	NA|304aa|up_5|NZ_CP054013.1_2464987_2465899_-	TIGR00534, Putative_OxPP_cycle_protein_OpcA, glucose-6-phosphate dehydrogenase assembly protein OpcA	NA|515aa|up_4|NZ_CP054013.1_2465951_2467496_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|374aa|up_3|NZ_CP054013.1_2467492_2468614_-	PRK03343, PRK03343, transaldolase; Validated	NA|701aa|up_2|NZ_CP054013.1_2468630_2470733_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|1399aa|up_1|NZ_CP054013.1_2471171_2475368_-	pfam00934, PE, PE family	NA|309aa|up_0|NZ_CP054013.1_2475769_2476696_+	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|422aa|down_0|NZ_CP054013.1_2479121_2480387_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|329aa|down_1|NZ_CP054013.1_2480414_2481401_-	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|288aa|down_2|NZ_CP054013.1_2481420_2482284_+	NA	NA|311aa|down_3|NZ_CP054013.1_2482233_2483166_-	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]	NA|262aa|down_4|NZ_CP054013.1_2483277_2484063_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|314aa|down_5|NZ_CP054013.1_2484059_2485001_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|592aa|down_6|NZ_CP054013.1_2485103_2486879_-	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|269aa|down_7|NZ_CP054013.1_2486926_2487733_+	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|847aa|down_8|NZ_CP054013.1_2487729_2490270_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|398aa|down_9|NZ_CP054013.1_2490266_2491460_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	16	2477642-2477830	4	CRT	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCGCCGGCCCCGCCGGC	18	4	5	2477660-2477677|2477696-2477722|2477741-2477758|2477741-2477758|2477777-2477812	NZ_CP054013.1_2474058-2474075|NZ_CP054013.1_2474094-2474120|NZ_CP054013.1_195035-195052|NZ_CP054013.1_3646180-3646197|NZ_CP054013.1_2474175-2474210	NA	4	4	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|38aa|up_8|NZ_CP054013.1_2463657_2463771_-,NA|137aa|up_7|NZ_CP054013.1_2463820_2464231_-,NA|288aa|down_2|NZ_CP054013.1_2481420_2482284_+	NA|155aa|up_9|NZ_CP054013.1_2462740_2463205_-	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|38aa|up_8|NZ_CP054013.1_2463657_2463771_-	NA	NA|137aa|up_7|NZ_CP054013.1_2463820_2464231_-	NA	NA|248aa|up_6|NZ_CP054013.1_2464247_2464991_-	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	NA|304aa|up_5|NZ_CP054013.1_2464987_2465899_-	TIGR00534, Putative_OxPP_cycle_protein_OpcA, glucose-6-phosphate dehydrogenase assembly protein OpcA	NA|515aa|up_4|NZ_CP054013.1_2465951_2467496_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|374aa|up_3|NZ_CP054013.1_2467492_2468614_-	PRK03343, PRK03343, transaldolase; Validated	NA|701aa|up_2|NZ_CP054013.1_2468630_2470733_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|1399aa|up_1|NZ_CP054013.1_2471171_2475368_-	pfam00934, PE, PE family	NA|309aa|up_0|NZ_CP054013.1_2475769_2476696_+	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|422aa|down_0|NZ_CP054013.1_2479121_2480387_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|329aa|down_1|NZ_CP054013.1_2480414_2481401_-	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|288aa|down_2|NZ_CP054013.1_2481420_2482284_+	NA	NA|311aa|down_3|NZ_CP054013.1_2482233_2483166_-	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]	NA|262aa|down_4|NZ_CP054013.1_2483277_2484063_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|314aa|down_5|NZ_CP054013.1_2484059_2485001_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|592aa|down_6|NZ_CP054013.1_2485103_2486879_-	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|269aa|down_7|NZ_CP054013.1_2486926_2487733_+	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|847aa|down_8|NZ_CP054013.1_2487729_2490270_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|398aa|down_9|NZ_CP054013.1_2490266_2491460_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	17	2930389-2930643	5	CRT	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2930470-2930487|2930470-2930487|2930560-2930577	NZ_CP054013.1_1241608-1241591|NZ_CP054013.1_1447970-1447953|NZ_CP054013.1_4294543-4294526	NA	5	5	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP054013.1_2929748_2930012_-,NA	NA|165aa|up_9|NZ_CP054013.1_2916042_2916537_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP054013.1_2916940_2917618_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP054013.1_2917976_2920802_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP054013.1_2921028_2921889_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP054013.1_2921929_2922796_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP054013.1_2922800_2924687_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP054013.1_2924702_2926736_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP054013.1_2926855_2929081_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP054013.1_2929356_2929752_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP054013.1_2929748_2930012_-	NA	NA|346aa|down_0|NZ_CP054013.1_2931780_2932818_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP054013.1_2932817_2934185_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|480aa|down_2|NZ_CP054013.1_2934358_2935798_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|486aa|down_3|NZ_CP054013.1_2935830_2937288_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP054013.1_2937317_2938268_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP054013.1_2938282_2938699_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP054013.1_2938976_2939399_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|101aa|down_7|NZ_CP054013.1_2939447_2939750_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP054013.1_2939746_2940061_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP054013.1_2940060_2941794_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	18	3010914-3011133	10	CRISPRCasFinder	no		cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_3|NZ_CP054013.1_3002020_3002428_-,NA|127aa|down_5|NZ_CP054013.1_3018649_3019030_-	NA|741aa|up_9|NZ_CP054013.1_2995988_2998211_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_8|NZ_CP054013.1_2998248_2998692_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_7|NZ_CP054013.1_2998805_2999399_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_6|NZ_CP054013.1_2999481_3000087_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_5|NZ_CP054013.1_3000186_3001191_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_4|NZ_CP054013.1_3001290_3002043_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_3|NZ_CP054013.1_3002020_3002428_-	NA	NA|368aa|up_2|NZ_CP054013.1_3002562_3003666_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|399aa|up_1|NZ_CP054013.1_3003665_3004862_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|1460aa|up_0|NZ_CP054013.1_3005031_3009411_-	pfam00823, PPE, PPE family	NA|155aa|down_0|NZ_CP054013.1_3013160_3013625_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP054013.1_3013722_3014586_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP054013.1_3014623_3015895_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP054013.1_3016166_3017282_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP054013.1_3017272_3018613_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP054013.1_3018649_3019030_-	NA	NA|621aa|down_6|NZ_CP054013.1_3019186_3021049_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP054013.1_3021056_3021536_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP054013.1_3021772_3022546_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP054013.1_3022549_3023317_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	19	3963352-3964706	4,11,6	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-C,Type III-B,Type III-A,Type III-D	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	17,17,18	18	TypeIII-C,TypeIII-B,TypeIII-A,TypeIII-D	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP054013.1_3956631_3956886_-,NA|135aa|up_7|NZ_CP054013.1_3957033_3957438_+,NA|64aa|up_6|NZ_CP054013.1_3957434_3957626_+,NA|86aa|up_4|NZ_CP054013.1_3959212_3959470_+,NA|104aa|up_3|NZ_CP054013.1_3959574_3959886_+,NA|203aa|up_2|NZ_CP054013.1_3960305_3960914_+,NA	NA|92aa|up_9|NZ_CP054013.1_3956180_3956456_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP054013.1_3956631_3956886_-	NA	NA|135aa|up_7|NZ_CP054013.1_3957033_3957438_+	NA	NA|64aa|up_6|NZ_CP054013.1_3957434_3957626_+	NA	NA|385aa|up_5|NZ_CP054013.1_3957824_3958979_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP054013.1_3959212_3959470_+	NA	NA|104aa|up_3|NZ_CP054013.1_3959574_3959886_+	NA	NA|203aa|up_2|NZ_CP054013.1_3960305_3960914_+	NA	NA|470aa|up_1|NZ_CP054013.1_3960984_3962394_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP054013.1_3962390_3963203_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP054013.1_3964732_3965994_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP054013.1_3967791_3968133_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP054013.1_3968133_3969150_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP054013.1_3969162_3970311_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP054013.1_3970406_3971534_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP054013.1_3971530_3972439_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP054013.1_3972419_3973130_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP054013.1_3973139_3973514_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|810aa|down_8|NZ_CP054013.1_3973510_3975940_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_9|NZ_CP054013.1_3975936_3976659_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_013267635.1_ASM1326763v1	NZ_CP054013	Mycobacterium tuberculosis strain FDAARGOS_757 chromosome, complete genome	20	3966029-3967743	12,7,5	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-C,Type III-B,Type III-A,Type III-D	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	23,23,22	23	TypeIII-C,TypeIII-B,TypeIII-A,TypeIII-D	cas3,DEDDh,csa3,c2c9_V-U4,RT,DinG,WYL,cas4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_9|NZ_CP054013.1_3956631_3956886_-,NA|135aa|up_8|NZ_CP054013.1_3957033_3957438_+,NA|64aa|up_7|NZ_CP054013.1_3957434_3957626_+,NA|86aa|up_5|NZ_CP054013.1_3959212_3959470_+,NA|104aa|up_4|NZ_CP054013.1_3959574_3959886_+,NA|203aa|up_3|NZ_CP054013.1_3960305_3960914_+,NA	NA|85aa|up_9|NZ_CP054013.1_3956631_3956886_-	NA	NA|135aa|up_8|NZ_CP054013.1_3957033_3957438_+	NA	NA|64aa|up_7|NZ_CP054013.1_3957434_3957626_+	NA	NA|385aa|up_6|NZ_CP054013.1_3957824_3958979_+	pfam00665, rve, Integrase core domain	NA|86aa|up_5|NZ_CP054013.1_3959212_3959470_+	NA	NA|104aa|up_4|NZ_CP054013.1_3959574_3959886_+	NA	NA|203aa|up_3|NZ_CP054013.1_3960305_3960914_+	NA	NA|470aa|up_2|NZ_CP054013.1_3960984_3962394_+	pfam00665, rve, Integrase core domain	NA|271aa|up_1|NZ_CP054013.1_3962390_3963203_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_0|NZ_CP054013.1_3964732_3965994_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP054013.1_3967791_3968133_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP054013.1_3968133_3969150_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP054013.1_3969162_3970311_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP054013.1_3970406_3971534_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP054013.1_3971530_3972439_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP054013.1_3972419_3973130_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP054013.1_3973139_3973514_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|810aa|down_7|NZ_CP054013.1_3973510_3975940_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_8|NZ_CP054013.1_3975936_3976659_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP054013.1_3977058_3977604_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
