The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP054006	Staphylococcus hominis strain FDAARGOS_762 chromosome, complete genome	2172396	110351	116925	2172396		Staphylococcus_phage(14.29%)	8	NA	NA
WP_002449571.1|110351_111191_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	43.2	2.2e-59
WP_002449575.1|111317_112301_+	glycosyltransferase family 2 protein	NA	A8CG95	Salmonella_phage	43.4	1.0e-63
WP_002449079.1|112346_112955_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002449094.1|113063_113780_-	7-carboxy-7-deazaguanine synthase QueE	NA	E7DN68	Pneumococcus_phage	42.2	2.5e-51
WP_002449084.1|113779_114199_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	1.8e-06
WP_002449071.1|114195_114873_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	56.1	9.8e-66
WP_002449081.1|115205_115799_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	39.1	3.0e-34
WP_002449090.1|115782_116925_+	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	39.1	2.3e-22
>prophage 2
NZ_CP054006	Staphylococcus hominis strain FDAARGOS_762 chromosome, complete genome	2172396	129581	142704	2172396		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
WP_002449088.1|129581_130637_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	24.7	1.4e-23
WP_002449087.1|130731_131268_+	5'-3'-deoxyribonucleotidase	NA	A0A0A0PKY7	Bacillus_phage	38.4	3.4e-29
WP_002449080.1|131330_132254_-	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA	NA
WP_002449073.1|132382_133888_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.9	1.7e-57
WP_002449091.1|134171_134672_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	70.8	2.2e-51
WP_002449096.1|134682_135549_-	DMT family transporter	NA	NA	NA	NA	NA
WP_002449085.1|136286_136685_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	75.8	1.7e-54
WP_002449077.1|136647_138753_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	92.2	0.0e+00
WP_002449076.1|138866_139835_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	94.1	6.3e-175
WP_002449086.1|140019_140988_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	86.0	2.9e-148
WP_002449066.1|140977_141937_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	72.0	2.2e-10
WP_002449075.1|141933_142704_+	ATP-binding cassette domain-containing protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.1	7.6e-14
>prophage 3
NZ_CP054006	Staphylococcus hominis strain FDAARGOS_762 chromosome, complete genome	2172396	339579	348049	2172396		Synechococcus_phage(33.33%)	9	NA	NA
WP_002448044.1|339579_340062_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	3.6e-22
WP_002448136.1|340048_341173_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_002448194.1|341176_341881_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3FUQ7	Synechococcus_phage	44.2	3.6e-47
WP_002448160.1|341880_342141_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002448092.1|342142_342814_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_002448158.1|342806_344996_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	37.8	3.1e-137
WP_002448145.1|344974_346459_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.6	9.0e-48
WP_002448076.1|346451_347480_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-65
WP_002448123.1|347482_348049_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	41.4	6.1e-29
>prophage 4
NZ_CP054006	Staphylococcus hominis strain FDAARGOS_762 chromosome, complete genome	2172396	735260	747439	2172396		Bacillus_phage(25.0%)	14	NA	NA
WP_002449846.1|735260_736640_-	ATP-dependent DNA helicase RecQ	NA	M1PGQ0	Moumouvirus	34.9	2.4e-55
WP_002449747.1|736620_737586_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002449743.1|737682_737931_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	49.3	5.8e-16
WP_002449844.1|738014_738560_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_002449735.1|738997_740767_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	26.8	4.7e-19
WP_002449874.1|740747_741473_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.6	8.3e-47
WP_002449899.1|741680_742418_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_002449749.1|742419_742953_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	29.2	4.3e-08
WP_002449902.1|742945_743677_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.8	2.8e-10
WP_002449814.1|743775_744279_+	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_002449900.1|744304_745192_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	32.8	2.7e-39
WP_002449777.1|745359_745806_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_002449742.1|745906_746449_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_002449875.1|746530_747439_+	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	32.5	9.9e-05
>prophage 5
NZ_CP054006	Staphylococcus hominis strain FDAARGOS_762 chromosome, complete genome	2172396	793506	801749	2172396	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_002449798.1|793506_794283_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.0	2.9e-21
WP_002449740.1|794403_795294_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	32.8	1.6e-28
WP_002449896.1|795303_796650_-	DEAD/DEAH box helicase	NA	A0A1V0SBR7	Catovirus	33.0	4.2e-52
WP_002449766.1|796674_797778_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.0	1.5e-07
WP_002449878.1|797767_798457_-|tRNA	tRNA (adenine(22)-N(1))-methyltransferase TrmK	tRNA	NA	NA	NA	NA
WP_002449793.1|798560_799667_-	RNA polymerase sigma factor RpoD	NA	F4YCU2	Synechococcus_phage	37.6	1.1e-37
WP_002449887.1|799940_801749_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	37.1	2.5e-55
>prophage 6
NZ_CP054006	Staphylococcus hominis strain FDAARGOS_762 chromosome, complete genome	2172396	982884	1018790	2172396	tRNA	Staphylococcus_phage(96.15%)	32	NA	NA
WP_172848037.1|982884_989985_-	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	29.2	2.6e-07
WP_002449646.1|990231_990543_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	74.8	9.7e-37
WP_002449629.1|990561_992976_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	88.6	0.0e+00
WP_002449671.1|993280_994465_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	81.6	3.9e-179
WP_002449655.1|994576_995536_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	83.3	5.6e-67
WP_002449652.1|995532_996093_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	71.4	2.2e-71
WP_002449620.1|996152_996554_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002449637.1|996873_997701_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_002449663.1|997909_998911_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	67.6	3.0e-127
WP_002449638.1|998962_999421_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	87.3	1.2e-59
WP_002449675.1|999433_1000618_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	77.2	9.7e-178
WP_002449633.1|1000629_1001262_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	72.9	7.4e-84
WP_002449616.1|1001268_1002312_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	66.5	3.4e-134
WP_002449656.1|1002721_1004209_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	80.7	2.2e-17
WP_002449648.1|1004506_1005355_-	glucosaminidase domain-containing protein	NA	A0A1W6JQU5	Staphylococcus_phage	43.0	1.5e-39
WP_002449634.1|1005601_1005826_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002449626.1|1006073_1006520_+	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	50.3	3.4e-27
WP_002449640.1|1006506_1006953_+	competence protein ComK	NA	NA	NA	NA	NA
WP_002449665.1|1006927_1007392_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	37.3	6.6e-13
WP_002449673.1|1007590_1008304_-	transaldolase	NA	M1PR54	Cyanophage	35.5	1.9e-19
WP_002449644.1|1008549_1008858_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002449641.1|1008897_1009263_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	60.2	1.3e-32
WP_002449657.1|1009259_1009613_+	CrcB family protein	NA	NA	NA	NA	NA
WP_002449660.1|1009673_1010507_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	74.7	1.8e-122
WP_002449668.1|1010622_1011534_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	77.4	3.2e-96
WP_002449627.1|1011632_1012829_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	88.9	1.3e-201
WP_002449643.1|1013214_1014810_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	83.0	1.7e-262
WP_039984211.1|1014850_1015606_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	74.4	1.1e-105
WP_002449666.1|1015610_1016084_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	55.1	5.4e-47
WP_002449651.1|1016151_1016397_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	72.6	5.7e-32
WP_002449662.1|1016387_1017395_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	52.1	6.1e-96
WP_002449631.1|1017395_1018790_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	63.2	6.3e-176
>prophage 7
NZ_CP054006	Staphylococcus hominis strain FDAARGOS_762 chromosome, complete genome	2172396	1278667	1291889	2172396	integrase	Staphylococcus_phage(38.46%)	15	1277987:1278011	1291891:1291915
1277987:1278011	attL	AATAACGTATTCAAAACGTATTCAA	NA	NA	NA	NA
WP_002448586.1|1278667_1279933_-	Fic family protein	NA	Q9AZ49	Lactococcus_phage	30.8	2.3e-44
WP_039984018.1|1281387_1281648_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002448329.1|1282605_1282971_-	hypothetical protein	NA	A0A1W6JP87	Staphylococcus_phage	55.1	1.6e-35
WP_002448613.1|1284062_1284404_-	hypothetical protein	NA	A0A2H4JEH8	uncultured_Caudovirales_phage	50.5	1.4e-25
WP_002448499.1|1284400_1284844_-	hypothetical protein	NA	A0A2H4JBD6	uncultured_Caudovirales_phage	55.9	1.3e-37
WP_002448352.1|1284854_1285523_-	hypothetical protein	NA	Q4ZE82	Staphylococcus_phage	30.8	6.3e-25
WP_002448420.1|1285812_1286598_-	ATP-binding protein	NA	A0A2H4JCH7	uncultured_Caudovirales_phage	56.4	2.1e-80
WP_002448442.1|1286609_1287716_-	DnaD domain protein	NA	A0A0D4DCE1	Staphylococcus_phage	63.5	2.6e-52
WP_002448581.1|1287708_1288032_-	helix-turn-helix domain-containing protein	NA	A0A2I6PDA9	Staphylococcus_phage	57.4	4.5e-21
WP_002448498.1|1288072_1288390_-	DUF1474 family protein	NA	A0A2H4JB50	uncultured_Caudovirales_phage	50.5	1.6e-23
WP_002448426.1|1288653_1289295_-	phage repressor protein	NA	A0A2H4JB17	uncultured_Caudovirales_phage	62.1	2.6e-68
WP_002448320.1|1289358_1289625_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_172848039.1|1289664_1289901_-	helix-turn-helix transcriptional regulator	NA	A0A1Q1PVY0	Staphylococcus_phage	40.5	7.9e-07
WP_002448549.1|1290026_1290629_+	helix-turn-helix domain-containing protein	NA	A0A141E1S0	Streptococcus_phage	57.4	4.7e-11
WP_002448511.1|1290752_1291889_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	41.5	1.6e-73
1291891:1291915	attR	AATAACGTATTCAAAACGTATTCAA	NA	NA	NA	NA
>prophage 8
NZ_CP054006	Staphylococcus hominis strain FDAARGOS_762 chromosome, complete genome	2172396	1422954	1435413	2172396	terminase,integrase	uncultured_Caudovirales_phage(56.25%)	20	1415753:1415768	1436525:1436540
1415753:1415768	attL	ATTGATTTTGATTATT	NA	NA	NA	NA
WP_002448435.1|1422954_1423527_-|terminase	terminase small subunit	terminase	A0A2H4JBF3	uncultured_Caudovirales_phage	93.7	6.9e-97
WP_002454945.1|1423537_1423867_-	transcriptional regulator	NA	A0A2H4JEH8	uncultured_Caudovirales_phage	88.1	1.4e-46
WP_039984016.1|1423863_1424301_-	pathogenicity island protein	NA	A0A2H4JBD6	uncultured_Caudovirales_phage	88.4	5.9e-64
WP_002448371.1|1424355_1424568_-	hypothetical protein	NA	A0A2H4JHW4	uncultured_Caudovirales_phage	98.6	8.6e-29
WP_002448413.1|1424567_1425158_-	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	96.9	2.5e-102
WP_002448487.1|1425172_1425925_-	hypothetical protein	NA	A0A2H4JD56	uncultured_Caudovirales_phage	93.6	5.5e-126
WP_002448465.1|1425934_1426267_-	hypothetical protein	NA	A0A2H4JHK4	uncultured_Caudovirales_phage	86.4	1.7e-47
WP_002448444.1|1426683_1427268_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002448587.1|1427264_1427909_-	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	63.6	2.4e-74
WP_002448496.1|1427910_1428432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002448509.1|1428738_1430448_-	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	68.1	1.1e-227
WP_002448617.1|1430461_1431331_-	primase C-terminal domain-containing protein	NA	A0A2H4JEH3	uncultured_Caudovirales_phage	60.0	7.3e-98
WP_002448519.1|1431425_1431734_-	DUF1474 family protein	NA	A0A2H4JB50	uncultured_Caudovirales_phage	54.0	1.1e-24
WP_002448390.1|1431737_1431938_-	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	53.8	3.1e-12
WP_002448458.1|1431952_1432135_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002448400.1|1432153_1432426_-	helix-turn-helix domain-containing protein	NA	Q4ZE77	Staphylococcus_phage	70.0	4.1e-31
WP_002448385.1|1432429_1432639_-	helix-turn-helix transcriptional regulator	NA	Q4ZE78	Staphylococcus_phage	73.1	7.7e-22
WP_002448621.1|1432781_1433489_+	helix-turn-helix transcriptional regulator	NA	Q4ZE79	Staphylococcus_phage	33.9	6.3e-15
WP_002448485.1|1433569_1434178_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002448428.1|1434198_1435413_+|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	43.1	5.8e-85
1436525:1436540	attR	ATTGATTTTGATTATT	NA	NA	NA	NA
