assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013267255.1_ASM1326725v1	NZ_CP053951	Bacillus cereus strain FDAARGOS_799 chromosome, complete genome	1	323844-323994	1	PILER-CR	no		DEDDh,WYL,cas14j,csa3,cas3,DinG,c2c9_V-U4	Orphan	TGGTCCAACCGGTCCAACTGGT	22	0	0	NA	NA	NA	2	2	Orphan	DEDDh,WYL,cas14j,csa3,cas3,DinG,c2c9_V-U4,cas14k,RT	NA|132aa|up_4|NZ_CP053951.1_316876_317272_-,NA|48aa|down_0|NZ_CP053951.1_325714_325858_-	NA|136aa|up_9|NZ_CP053951.1_313361_313769_+	cd04779, HTH_MerR-like_sg4, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily	NA|445aa|up_8|NZ_CP053951.1_313888_315223_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|138aa|up_7|NZ_CP053951.1_315276_315690_+	pfam03899, ATP-synt_I, ATP synthase I chain	NA|183aa|up_6|NZ_CP053951.1_315888_316437_+	PRK04164, PRK04164, hypothetical protein; Provisional	NA|80aa|up_5|NZ_CP053951.1_316560_316800_-	pfam13061, DUF3923, Protein of unknown function (DUF3923)	NA|132aa|up_4|NZ_CP053951.1_316876_317272_-	NA	NA|305aa|up_3|NZ_CP053951.1_317550_318465_+	sd00006, TPR, Tetratricopeptide repeat	NA|398aa|up_2|NZ_CP053951.1_318505_319699_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|181aa|up_1|NZ_CP053951.1_319811_320354_+	pfam11706, zf-CGNR, CGNR zinc finger	NA|827aa|up_0|NZ_CP053951.1_321260_323741_+	pfam03157, Glutenin_hmw, High molecular weight glutenin subunit	NA|48aa|down_0|NZ_CP053951.1_325714_325858_-	NA	NA|154aa|down_1|NZ_CP053951.1_326135_326597_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|83aa|down_2|NZ_CP053951.1_326806_327055_+	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|374aa|down_3|NZ_CP053951.1_327118_328240_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|386aa|down_4|NZ_CP053951.1_328269_329427_-	PRK12464, PRK12464, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional	NA|333aa|down_5|NZ_CP053951.1_329817_330816_+	PRK12556, PRK12556, tryptophanyl-tRNA synthetase; Provisional	NA|149aa|down_6|NZ_CP053951.1_330824_331271_-	cd04677, Nudix_Hydrolase_18, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|280aa|down_7|NZ_CP053951.1_331288_332128_-	pfam10978, DUF2785, Protein of unknown function (DUF2785)	NA|241aa|down_8|NZ_CP053951.1_332251_332974_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|340aa|down_9|NZ_CP053951.1_333141_334161_+	pfam13350, Y_phosphatase3, Tyrosine phosphatase family
GCF_013267255.1_ASM1326725v1	NZ_CP053951	Bacillus cereus strain FDAARGOS_799 chromosome, complete genome	2	422538-422645	1	CRISPRCasFinder	no		DEDDh,WYL,cas14j,csa3,cas3,DinG,c2c9_V-U4	Orphan	GATATATTTGAAAAATCGTTGATATA	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas14j,csa3,cas3,DinG,c2c9_V-U4,cas14k,RT	NA,NA|185aa|down_1|NZ_CP053951.1_424103_424658_+,NA|199aa|down_2|NZ_CP053951.1_424788_425385_-,NA|120aa|down_8|NZ_CP053951.1_435835_436195_+	NA|420aa|up_9|NZ_CP053951.1_412391_413651_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|208aa|up_8|NZ_CP053951.1_413720_414344_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|355aa|up_7|NZ_CP053951.1_414529_415594_+	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|224aa|up_6|NZ_CP053951.1_415593_416265_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|371aa|up_5|NZ_CP053951.1_416313_417426_-	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type	NA|197aa|up_4|NZ_CP053951.1_417566_418157_-	pfam13671, AAA_33, AAA domain	NA|307aa|up_3|NZ_CP053951.1_418372_419293_+	pfam04072, LCM, Leucine carboxyl methyltransferase	NA|73aa|up_2|NZ_CP053951.1_419429_419648_+	pfam01139, RtcB, tRNA-splicing ligase RtcB	NA|320aa|up_1|NZ_CP053951.1_419930_420890_+	pfam01139, RtcB, tRNA-splicing ligase RtcB	NA|411aa|up_0|NZ_CP053951.1_421217_422450_+	pfam13285, DUF4073, Domain of unknown function (DUF4073)	NA|332aa|down_0|NZ_CP053951.1_422847_423843_+	PRK03910, PRK03910, D-cysteine desulfhydrase; Validated	NA|185aa|down_1|NZ_CP053951.1_424103_424658_+	NA	NA|199aa|down_2|NZ_CP053951.1_424788_425385_-	NA	NA|493aa|down_3|NZ_CP053951.1_425812_427291_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|1066aa|down_4|NZ_CP053951.1_427874_431072_+	COG0369, CysJ, Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism]	NA|704aa|down_5|NZ_CP053951.1_431283_433395_-	cd06974, TerD_like, Uncharacterized proteins involved in stress response, similar to tellurium resistance terD	NA|143aa|down_6|NZ_CP053951.1_434068_434497_+	pfam17428, DUF5412, Family of unknown function (DUF5412)	NA|317aa|down_7|NZ_CP053951.1_434803_435754_+	PRK15442, PRK15442, beta-lactamase TEM; Provisional	NA|120aa|down_8|NZ_CP053951.1_435835_436195_+	NA	NA|596aa|down_9|NZ_CP053951.1_436733_438521_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_013267255.1_ASM1326725v1	NZ_CP053951	Bacillus cereus strain FDAARGOS_799 chromosome, complete genome	3	2537773-2537865	2	CRISPRCasFinder	no		DEDDh,WYL,cas14j,csa3,cas3,DinG,c2c9_V-U4	Orphan	CCAATACCTGCATTGCTATTTAAT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas14j,csa3,cas3,DinG,c2c9_V-U4,cas14k,RT	NA|143aa|up_8|NZ_CP053951.1_2529963_2530392_-,NA|71aa|up_0|NZ_CP053951.1_2535234_2535447_-,NA|282aa|down_3|NZ_CP053951.1_2542501_2543347_+,NA|100aa|down_4|NZ_CP053951.1_2543401_2543701_-	NA|511aa|up_9|NZ_CP053951.1_2528269_2529802_-	PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated	NA|143aa|up_8|NZ_CP053951.1_2529963_2530392_-	NA	NA|330aa|up_7|NZ_CP053951.1_2530612_2531602_-	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase	NA|245aa|up_6|NZ_CP053951.1_2531611_2532346_-	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|43aa|up_5|NZ_CP053951.1_2532526_2532655_+	pfam14149, YhfH, YhfH-like protein	NA|338aa|up_4|NZ_CP053951.1_2532694_2533708_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|170aa|up_3|NZ_CP053951.1_2533902_2534412_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|118aa|up_2|NZ_CP053951.1_2534545_2534899_+	pfam14470, bPH_3, Bacterial PH domain	NA|102aa|up_1|NZ_CP053951.1_2534925_2535231_-	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087)	NA|71aa|up_0|NZ_CP053951.1_2535234_2535447_-	NA	NA|191aa|down_0|NZ_CP053951.1_2539072_2539645_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|650aa|down_1|NZ_CP053951.1_2539918_2541868_-	pfam05569, Peptidase_M56, BlaR1 peptidase M56	NA|134aa|down_2|NZ_CP053951.1_2541870_2542272_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|282aa|down_3|NZ_CP053951.1_2542501_2543347_+	NA	NA|100aa|down_4|NZ_CP053951.1_2543401_2543701_-	NA	NA|789aa|down_5|NZ_CP053951.1_2543834_2546201_-	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only]	NA|451aa|down_6|NZ_CP053951.1_2546442_2547795_+	pfam13218, DUF4026, Protein of unknown function (DUF4026)	NA|474aa|down_7|NZ_CP053951.1_2547851_2549273_-	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed	NA|312aa|down_8|NZ_CP053951.1_2549292_2550228_-	PRK12435, PRK12435, ferrochelatase; Provisional	NA|349aa|down_9|NZ_CP053951.1_2550242_2551289_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated
GCF_013267255.1_ASM1326725v1	NZ_CP053951	Bacillus cereus strain FDAARGOS_799 chromosome, complete genome	4	4133993-4134117	3	CRISPRCasFinder	no		DEDDh,WYL,cas14j,csa3,cas3,DinG,c2c9_V-U4	Orphan	GGTTAAGAAAGAAAAATGGAGAATTAATCAAACGTTTGTTTAAG	44	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas14j,csa3,cas3,DinG,c2c9_V-U4,cas14k,RT	NA|62aa|up_5|NZ_CP053951.1_4129836_4130022_+,NA|176aa|up_0|NZ_CP053951.1_4133373_4133901_+,NA|115aa|down_4|NZ_CP053951.1_4136408_4136753_+	NA|595aa|up_9|NZ_CP053951.1_4125313_4127098_+	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase	NA|241aa|up_8|NZ_CP053951.1_4127237_4127960_+	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain	NA|183aa|up_7|NZ_CP053951.1_4127963_4128512_+	pfam13305, WHG, WHG domain	NA|238aa|up_6|NZ_CP053951.1_4128976_4129690_+	pfam02517, Abi, CAAX protease self-immunity	NA|62aa|up_5|NZ_CP053951.1_4129836_4130022_+	NA	NA|83aa|up_4|NZ_CP053951.1_4130035_4130284_+	pfam07875, Coat_F, Coat F domain	NA|368aa|up_3|NZ_CP053951.1_4130377_4131481_+	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases	NA|338aa|up_2|NZ_CP053951.1_4131503_4132517_+	pfam13303, PTS_EIIC_2, Phosphotransferase system, EIIC	NA|216aa|up_1|NZ_CP053951.1_4132582_4133230_-	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily	NA|176aa|up_0|NZ_CP053951.1_4133373_4133901_+	NA	NA|122aa|down_0|NZ_CP053951.1_4134312_4134678_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|128aa|down_1|NZ_CP053951.1_4134719_4135103_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|115aa|down_2|NZ_CP053951.1_4135599_4135944_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|103aa|down_3|NZ_CP053951.1_4135947_4136256_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|115aa|down_4|NZ_CP053951.1_4136408_4136753_+	NA	NA|342aa|down_5|NZ_CP053951.1_4137164_4138190_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|222aa|down_6|NZ_CP053951.1_4138182_4138848_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|271aa|down_7|NZ_CP053951.1_4138870_4139683_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|269aa|down_8|NZ_CP053951.1_4139752_4140559_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|262aa|down_9|NZ_CP053951.1_4140797_4141583_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]
GCF_013267255.1_ASM1326725v1	NZ_CP053951	Bacillus cereus strain FDAARGOS_799 chromosome, complete genome	5	5331139-5333442	1	CRT	no		DEDDh,WYL,cas14j,csa3,cas3,DinG,c2c9_V-U4	Orphan	AGTNGCACCNGTAGCNCC	18	0	0	NA	NA	NA	33	33	Orphan	DEDDh,WYL,cas14j,csa3,cas3,DinG,c2c9_V-U4,cas14k,RT	NA|106aa|up_9|NZ_CP053951.1_5321480_5321798_+,NA|82aa|up_2|NZ_CP053951.1_5328988_5329234_-,NA|46aa|down_2|NZ_CP053951.1_5336120_5336258_-	NA|106aa|up_9|NZ_CP053951.1_5321480_5321798_+	NA	NA|181aa|up_8|NZ_CP053951.1_5322115_5322658_+	COG2322, COG2322, Predicted membrane protein [Function unknown]	NA|388aa|up_7|NZ_CP053951.1_5322774_5323938_+	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process	NA|270aa|up_6|NZ_CP053951.1_5324038_5324848_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|304aa|up_5|NZ_CP053951.1_5324844_5325756_+	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases	NA|619aa|up_4|NZ_CP053951.1_5325769_5327626_+	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional	NA|317aa|up_3|NZ_CP053951.1_5327975_5328926_+	COG3584, COG3584, Uncharacterized protein conserved in bacteria [Function unknown]	NA|82aa|up_2|NZ_CP053951.1_5328988_5329234_-	NA	NA|318aa|up_1|NZ_CP053951.1_5329414_5330368_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|75aa|up_0|NZ_CP053951.1_5330389_5330614_+	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|322aa|down_0|NZ_CP053951.1_5334053_5335019_-	COG4974, XerD, Site-specific recombinase XerD [DNA replication, recombination, and repair]	NA|319aa|down_1|NZ_CP053951.1_5335132_5336089_+	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|46aa|down_2|NZ_CP053951.1_5336120_5336258_-	NA	NA|208aa|down_3|NZ_CP053951.1_5336357_5336981_-	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|425aa|down_4|NZ_CP053951.1_5337073_5338348_+	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|424aa|down_5|NZ_CP053951.1_5338340_5339612_+	pfam06838, Met_gamma_lyase, Methionine gamma-lyase	NA|130aa|down_6|NZ_CP053951.1_5339797_5340187_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|445aa|down_7|NZ_CP053951.1_5340235_5341570_+	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|108aa|down_8|NZ_CP053951.1_5342003_5342327_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|181aa|down_9|NZ_CP053951.1_5342319_5342862_+	pfam08006, DUF1700, Protein of unknown function (DUF1700)
GCF_013267255.1_ASM1326725v1	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	1	151631-151864	1	CRT	no	cas14k	csa3,cas14j,cas14k,RT	Unclear	AAAGCCAGAAACTAAGCCAGAGACAAAACC	30	2	2	151709-151726|151757-151786	NZ_CP053950.1_151613-151630|NZ_CP053950.1_151625-151654	NA	4	4	TypeV	DEDDh,WYL,cas14j,csa3,cas3,DinG,c2c9_V-U4,cas14k,RT	NA|110aa|up_7|NZ_CP053950.1_140654_140984_-,NA|103aa|up_5|NZ_CP053950.1_142729_143038_-,NA|318aa|up_3|NZ_CP053950.1_147359_148313_+,NA|500aa|up_2|NZ_CP053950.1_148332_149832_+,NA|150aa|up_1|NZ_CP053950.1_149848_150298_+,NA|782aa|down_0|NZ_CP053950.1_152489_154835_+,NA|54aa|down_1|NZ_CP053950.1_154966_155128_+,NA|62aa|down_2|NZ_CP053950.1_155314_155500_-,NA|311aa|down_6|NZ_CP053950.1_159012_159945_+,NA|289aa|down_7|NZ_CP053950.1_159946_160813_+,NA|68aa|down_8|NZ_CP053950.1_160854_161058_+,NA|68aa|down_9|NZ_CP053950.1_161124_161328_+	NA|429aa|up_9|NZ_CP053950.1_137585_138872_-	pfam13814, Replic_Relax, Replication-relaxation	NA|436aa|up_8|NZ_CP053950.1_139306_140614_-	pfam00091, Tubulin, Tubulin/FtsZ family, GTPase domain	NA|110aa|up_7|NZ_CP053950.1_140654_140984_-	NA	NA|202aa|up_6|NZ_CP053950.1_141582_142188_+	cd04765, HTH_MlrA-like_sg2, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators	NA|103aa|up_5|NZ_CP053950.1_142729_143038_-	NA	cas14k|490aa|up_4|NZ_CP053950.1_145034_146504_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|318aa|up_3|NZ_CP053950.1_147359_148313_+	NA	NA|500aa|up_2|NZ_CP053950.1_148332_149832_+	NA	NA|150aa|up_1|NZ_CP053950.1_149848_150298_+	NA	NA|132aa|up_0|NZ_CP053950.1_150323_150719_+	pfam14208, DUF4320, Domain of unknown function (DUF4320)	NA|782aa|down_0|NZ_CP053950.1_152489_154835_+	NA	NA|54aa|down_1|NZ_CP053950.1_154966_155128_+	NA	NA|62aa|down_2|NZ_CP053950.1_155314_155500_-	NA	NA|287aa|down_3|NZ_CP053950.1_155874_156735_+	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB	NA|273aa|down_4|NZ_CP053950.1_156751_157570_+	pfam13614, AAA_31, AAA domain	NA|478aa|down_5|NZ_CP053950.1_157586_159020_+	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion]	NA|311aa|down_6|NZ_CP053950.1_159012_159945_+	NA	NA|289aa|down_7|NZ_CP053950.1_159946_160813_+	NA	NA|68aa|down_8|NZ_CP053950.1_160854_161058_+	NA	NA|68aa|down_9|NZ_CP053950.1_161124_161328_+	NA
