The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP053908	Hymenobacter sp. BRD128 chromosome, complete genome	4604416	3838739	3909448	4604416	tRNA,transposase,protease	Orpheovirus(20.0%)	54	NA	NA
WP_173116912.1|3838739_3840251_+|tRNA	glycine--tRNA ligase	tRNA	A0A2I2L3K8	Orpheovirus	29.6	7.6e-42
WP_173116913.1|3840303_3842742_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_173116914.1|3842883_3846333_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	30.7	1.1e-152
WP_173118511.1|3846533_3847151_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_173116915.1|3847427_3849239_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.6	5.3e-18
WP_173116916.1|3849422_3851903_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	32.1	4.8e-62
WP_173118513.1|3852120_3852996_+	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_173118515.1|3853092_3853656_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_173116918.1|3853750_3854023_+	PLDc_N domain-containing protein	NA	NA	NA	NA	NA
WP_173116920.1|3854113_3854383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173116922.1|3854355_3854742_-	DUF2939 domain-containing protein	NA	NA	NA	NA	NA
WP_173116924.1|3854851_3855736_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
WP_173116926.1|3855909_3856296_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_173116928.1|3856790_3857108_-	DUF721 domain-containing protein	NA	NA	NA	NA	NA
WP_173116930.1|3857203_3858331_-	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_173116932.1|3858407_3859589_+	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA	NA
WP_173118517.1|3859779_3860448_+	cytochrome C biosynthesis protein	NA	NA	NA	NA	NA
WP_173116934.1|3860600_3861077_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	41.4	1.1e-20
WP_157563949.1|3861264_3861648_+	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA	NA
WP_173116936.1|3861813_3863784_+	pseudouridine synthase	NA	NA	NA	NA	NA
WP_173116938.1|3863880_3864639_+	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_173116940.1|3864625_3865954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173116942.1|3865956_3866529_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_173116944.1|3866540_3866795_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173116946.1|3866909_3869039_+	SurA N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_173116948.1|3869180_3871031_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_173116950.1|3871854_3873729_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.9	1.8e-64
WP_173116952.1|3873868_3874489_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173116954.1|3875433_3875898_-	TPM domain-containing protein	NA	NA	NA	NA	NA
WP_173116956.1|3876034_3876667_-	LemA family protein	NA	NA	NA	NA	NA
WP_173116958.1|3876848_3877862_+	NTP transferase domain-containing protein	NA	I7I009	Enterobacteria_phage	26.6	9.3e-12
WP_173116960.1|3877882_3878725_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_173116962.1|3878841_3879654_+	glycogen/starch synthase	NA	NA	NA	NA	NA
WP_173116964.1|3879875_3881711_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	40.1	1.3e-109
WP_173116966.1|3881811_3883248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173116968.1|3883302_3883686_+	RidA family protein	NA	NA	NA	NA	NA
WP_173116970.1|3883721_3885269_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_173116972.1|3885619_3886804_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA	NA
WP_173116974.1|3887299_3888787_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA	NA
WP_173116976.1|3889197_3897111_-	T9SS type A sorting domain-containing protein	NA	NA	NA	NA	NA
WP_173116978.1|3897667_3898081_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173116980.1|3899247_3899448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118519.1|3899681_3900596_+	histone deacetylase	NA	NA	NA	NA	NA
WP_173116982.1|3900656_3900923_-	CsbD family protein	NA	NA	NA	NA	NA
WP_173116984.1|3900989_3901646_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173116986.1|3901670_3902459_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173116988.1|3902702_3904253_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_173116990.1|3904389_3904800_-|transposase	transposase	transposase	A0A1V0SCG6	Indivirus	26.8	4.8e-07
WP_173116992.1|3904997_3905300_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_173116994.1|3905296_3906178_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	35.7	1.7e-33
WP_173118521.1|3906842_3907355_+|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
WP_173116996.1|3907559_3908582_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_173116998.1|3908720_3909227_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173117000.1|3909184_3909448_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP053908	Hymenobacter sp. BRD128 chromosome, complete genome	4604416	4533272	4598138	4604416	transposase,protease	Erwinia_phage(12.5%)	56	NA	NA
WP_173117945.1|4533272_4534700_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A2H5BJT2	Erwinia_phage	27.6	1.1e-42
WP_173117948.1|4534808_4535846_-	type IX secretion system protein PorQ	NA	NA	NA	NA	NA
WP_173117950.1|4535926_4538434_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	42.3	6.2e-166
WP_173118581.1|4538844_4540755_+	OmpA family protein	NA	NA	NA	NA	NA
WP_173117952.1|4541857_4543579_-	DNA polymerase/3'-5' exonuclease PolX	NA	NA	NA	NA	NA
WP_173117954.1|4543739_4544186_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173117956.1|4544232_4544643_+	EVE domain-containing protein	NA	NA	NA	NA	NA
WP_173117958.1|4544776_4546369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173117960.1|4546446_4547052_+	ribonuclease HII	NA	E3T5H8	Cafeteria_roenbergensis_virus	40.0	1.7e-24
WP_173118583.1|4547599_4549153_-	CHASE3 domain-containing protein	NA	W8CYF6	Bacillus_phage	27.1	9.6e-16
WP_173117962.1|4549174_4549546_-	CZB domain-containing protein	NA	NA	NA	NA	NA
WP_173117964.1|4549655_4550768_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_173118585.1|4550920_4551643_+	2-phosphosulfolactate phosphatase	NA	NA	NA	NA	NA
WP_173117966.1|4551647_4552562_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_173117968.1|4552641_4553637_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_173117970.1|4553770_4554820_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_173117972.1|4554945_4555452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118587.1|4555448_4556792_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_173117974.1|4557007_4557445_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173117976.1|4557708_4558620_+	LysR family transcriptional regulator	NA	A0A2H4J8I9	uncultured_Caudovirales_phage	36.0	1.5e-05
WP_173117978.1|4558704_4559721_+	putative sulfate exporter family transporter	NA	NA	NA	NA	NA
WP_173117980.1|4559744_4560119_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173117982.1|4560352_4561933_+	amino acid permease	NA	NA	NA	NA	NA
WP_173117984.1|4562015_4562447_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173117986.1|4562484_4562694_-	DUF2945 domain-containing protein	NA	A0A1L2BWQ1	Bacteriophage	50.0	2.0e-09
WP_173117988.1|4562861_4564880_+	RICIN domain-containing protein	NA	NA	NA	NA	NA
WP_173117990.1|4566401_4566677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173117992.1|4566782_4568435_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_173117994.1|4570039_4570255_-	DUF350 domain-containing protein	NA	NA	NA	NA	NA
WP_173117996.1|4570273_4570486_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173117998.1|4570497_4571829_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118589.1|4571825_4572185_-	S-adenosylmethionine decarboxylase	NA	NA	NA	NA	NA
WP_173118000.1|4572369_4572789_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118002.1|4572889_4575328_-	M4 family metallopeptidase	NA	NA	NA	NA	NA
WP_173118004.1|4575654_4576776_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_173118006.1|4576918_4577461_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_173118008.1|4577558_4578035_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_173118010.1|4578134_4578767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118012.1|4578778_4578889_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_173118013.1|4578978_4579422_+	DUF2750 domain-containing protein	NA	NA	NA	NA	NA
WP_173118015.1|4579435_4581535_+	glycoside hydrolase family 97 protein	NA	NA	NA	NA	NA
WP_173118591.1|4581432_4581768_-	mannonate dehydratase	NA	NA	NA	NA	NA
WP_173118017.1|4581799_4583662_-	beta-glucuronidase	NA	NA	NA	NA	NA
WP_173118019.1|4583850_4585518_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_173118021.1|4585670_4586621_-	alpha/beta hydrolase	NA	A0A0G3G493	Raccoon_poxvirus	22.9	3.3e-11
WP_173118023.1|4586941_4587223_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_173118025.1|4587219_4588086_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	35.1	2.1e-20
WP_173118027.1|4588174_4588516_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118029.1|4588580_4589993_+	DUF3375 family protein	NA	NA	NA	NA	NA
WP_173118031.1|4590005_4590629_+	DUF4194 domain-containing protein	NA	NA	NA	NA	NA
WP_173118033.1|4590659_4594148_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_173118035.1|4594163_4595408_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118037.1|4596262_4596562_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118039.1|4596968_4597271_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_173118041.1|4597267_4597771_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_173118043.1|4597865_4598138_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 1
NZ_CP053909	Hymenobacter sp. BRD128 plasmid unnamed1, complete sequence	141380	30634	64678	141380	integrase,transposase	Bacillus_phage(100.0%)	31	19911:19925	69975:69989
19911:19925	attL	GCTGGCGGCCGGCAA	NA	NA	NA	NA
WP_173118655.1|30634_31006_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_173118657.1|31025_31595_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_173118659.1|31600_31984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118661.1|32249_32651_+	recombinase family protein	NA	NA	NA	NA	NA
WP_173118663.1|32660_33566_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_173118665.1|33562_34441_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118667.1|34670_36710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118669.1|37135_37612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118864.1|37754_38657_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_173118671.1|38911_39757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118673.1|40292_41612_+	S8 family serine peptidase	NA	A0A127AWU5	Bacillus_phage	34.1	2.1e-24
WP_173118675.1|41659_41902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118677.1|41941_42970_+	S1/P1 nuclease	NA	NA	NA	NA	NA
WP_173118679.1|42992_43292_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118681.1|43408_43816_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_173118683.1|43828_45010_-	VCBS repeat-containing protein	NA	NA	NA	NA	NA
WP_173118685.1|45061_49477_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118687.1|49431_50661_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118689.1|50699_51242_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118691.1|51336_51837_-	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_173118693.1|51847_52393_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118695.1|52529_56102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118697.1|56128_57757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118699.1|58499_58763_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_173118701.1|58894_59134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_173118703.1|59503_59959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118705.1|59969_60398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118707.1|60434_60842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118709.1|60865_61345_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118711.1|62155_63688_+	hypothetical protein	NA	NA	NA	NA	NA
WP_173118713.1|63709_64678_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
69975:69989	attR	TTGCCGGCCGCCAGC	NA	NA	NA	NA
