assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013201825.1_ASM1320182v1	NZ_CP053836	Halarcobacter ebronensis strain LMG 27922 chromosome, complete genome	1	1423195-1423304	1	CRISPRCasFinder	no		cas3,cas4,PrimPol,DEDDh,RT,cas2,cas1,cas9,csa3	Orphan	TGCAAAACTTGAAAAAGAGAATAAAG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,cas4,PrimPol,DEDDh,RT,cas2,cas1,cas9,csa3	NA,NA	NA|293aa|up_9|NZ_CP053836.1_1413581_1414460_+	pfam00892, EamA, EamA-like transporter family	NA|193aa|up_8|NZ_CP053836.1_1414459_1415038_+	pfam02525, Flavodoxin_2, Flavodoxin-like fold	NA|250aa|up_7|NZ_CP053836.1_1415054_1415804_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|99aa|up_6|NZ_CP053836.1_1415821_1416118_+	pfam03992, ABM, Antibiotic biosynthesis monooxygenase	NA|378aa|up_5|NZ_CP053836.1_1416130_1417264_+	COG1979, COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]	NA|212aa|up_4|NZ_CP053836.1_1417279_1417915_+	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|344aa|up_3|NZ_CP053836.1_1417925_1418957_+	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain	NA|367aa|up_2|NZ_CP053836.1_1418980_1420081_-	cd17473, MFS_arabinose_efflux_permease_like, Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily	NA|487aa|up_1|NZ_CP053836.1_1420229_1421690_+	PRK01269, PRK01269, tRNA s(4)U8 sulfurtransferase; Provisional	NA|351aa|up_0|NZ_CP053836.1_1421751_1422804_+	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family	NA|243aa|down_0|NZ_CP053836.1_1424068_1424797_-	TIGR03915, putative_DNA_metabolism_protein, probable DNA metabolism protein	NA|415aa|down_1|NZ_CP053836.1_1424793_1426038_-	TIGR03916, hypothetical_protein, putative DNA modification/repair radical SAM protein	NA|513aa|down_2|NZ_CP053836.1_1426094_1427633_-	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|213aa|down_3|NZ_CP053836.1_1427643_1428282_-	TIGR00558, Pyridoxine/pyridoxamine_5'-phosphate_oxidase, pyridoxamine-phosphate oxidase	NA|90aa|down_4|NZ_CP053836.1_1428296_1428566_-	COG3937, COG3937, Uncharacterized conserved protein [Function unknown]	NA|122aa|down_5|NZ_CP053836.1_1428634_1429000_-	cd03416, CbiX_SirB_N, Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain	NA|207aa|down_6|NZ_CP053836.1_1429002_1429623_-	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|262aa|down_7|NZ_CP053836.1_1429607_1430393_-	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|532aa|down_8|NZ_CP053836.1_1430560_1432156_+	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|159aa|down_9|NZ_CP053836.1_1432173_1432650_-	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]
GCF_013201825.1_ASM1320182v1	NZ_CP053836	Halarcobacter ebronensis strain LMG 27922 chromosome, complete genome	2	2139879-2139962	2	CRISPRCasFinder	no		cas3,cas4,PrimPol,DEDDh,RT,cas2,cas1,cas9,csa3	Orphan	CAAATAGGGCAAATAGGGCGTCA	23	1	1	2139902-2139939	NZ_CP053836.1_2139949-2139986	NA	1	1	Orphan	cas3,cas4,PrimPol,DEDDh,RT,cas2,cas1,cas9,csa3	NA|97aa|up_9|NZ_CP053836.1_2127712_2128003_-,NA|229aa|up_1|NZ_CP053836.1_2138151_2138838_+,NA|316aa|up_0|NZ_CP053836.1_2138841_2139789_+,NA	NA|97aa|up_9|NZ_CP053836.1_2127712_2128003_-	NA	NA|669aa|up_8|NZ_CP053836.1_2128011_2130018_-	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|526aa|up_7|NZ_CP053836.1_2130083_2131661_-	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional	NA|698aa|up_6|NZ_CP053836.1_2131644_2133738_-	COG4773, FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]	NA|238aa|up_5|NZ_CP053836.1_2133814_2134528_+	cd17534, REC_DC-like, phosphoacceptor receiver (REC) domain of modulated diguanylate cyclase and similar domains	NA|608aa|up_4|NZ_CP053836.1_2134529_2136353_+	COG3920, COG3920, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|185aa|up_3|NZ_CP053836.1_2136349_2136904_-	pfam02659, Mntp, Putative manganese efflux pump	NA|281aa|up_2|NZ_CP053836.1_2136996_2137839_+	PRK04201, PRK04201, zinc transporter ZupT; Provisional	NA|229aa|up_1|NZ_CP053836.1_2138151_2138838_+	NA	NA|316aa|up_0|NZ_CP053836.1_2138841_2139789_+	NA	NA|347aa|down_0|NZ_CP053836.1_2140082_2141123_-	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|347aa|down_1|NZ_CP053836.1_2141126_2142167_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|116aa|down_2|NZ_CP053836.1_2142163_2142511_-	COG4925, COG4925, Uncharacterized conserved protein [Function unknown]	NA|331aa|down_3|NZ_CP053836.1_2142764_2143757_+	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|304aa|down_4|NZ_CP053836.1_2143799_2144711_-	pfam06719, AraC_N, AraC-type transcriptional regulator N-terminus	NA|146aa|down_5|NZ_CP053836.1_2144958_2145396_+	cd02233, cupin_HNL-like, Granulicella tundricola hydroxynitrile lyase (GtHNL) and related proteins, cupin domain	NA|373aa|down_6|NZ_CP053836.1_2145662_2146781_-	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|505aa|down_7|NZ_CP053836.1_2146777_2148292_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|357aa|down_8|NZ_CP053836.1_2148285_2149356_-	pfam10442, FIST_C, FIST C domain	NA|597aa|down_9|NZ_CP053836.1_2149367_2151158_-	COG3437, COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms]
GCF_013201825.1_ASM1320182v1	NZ_CP053836	Halarcobacter ebronensis strain LMG 27922 chromosome, complete genome	3	2180150-2183082	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	cas3,cas4,PrimPol,DEDDh,RT,cas2,cas1,cas9,csa3	Type II-C, or Type II-C?,Type II-B, Type II-B,Type II-A	GTTTTAATCTACTCTCAAATCCCCATTTGATATAAT,GTTTTAATCTACTCTCAAATCCCCATTTGATATAAT,GTTTTAATCTACTCTCAAATCCCCATTTGATATAAT	36,36,36	0	0	NA	NA	NA:NA:NA	44,44,17	44	orTypeII-C?,TypeII-C,TypeII-B,TypeII-B,TypeII-A	cas3,cas4,PrimPol,DEDDh,RT,cas2,cas1,cas9,csa3	NA,NA|126aa|down_9|NZ_CP053836.1_2194138_2194516_-	NA|301aa|up_9|NZ_CP053836.1_2164090_2164993_+	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism]	NA|318aa|up_8|NZ_CP053836.1_2164992_2165946_+	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|259aa|up_7|NZ_CP053836.1_2165945_2166722_+	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|241aa|up_6|NZ_CP053836.1_2166724_2167447_+	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|1190aa|up_5|NZ_CP053836.1_2167579_2171149_+	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA	NA|911aa|up_4|NZ_CP053836.1_2171258_2173991_+	cd01948, EAL, EAL domain	NA|484aa|up_3|NZ_CP053836.1_2173965_2175417_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|480aa|up_2|NZ_CP053836.1_2175504_2176944_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|147aa|up_1|NZ_CP053836.1_2177081_2177522_+	cd12107, Hemerythrin, Hemerythrin	NA|785aa|up_0|NZ_CP053836.1_2177652_2180007_-	PRK09793, PRK09793, methyl-accepting chemotaxis protein IV	cas2|105aa|down_0|NZ_CP053836.1_2183130_2183445_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|291aa|down_1|NZ_CP053836.1_2183477_2184350_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1165aa|down_2|NZ_CP053836.1_2184457_2187952_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|496aa|down_3|NZ_CP053836.1_2188557_2190045_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|229aa|down_4|NZ_CP053836.1_2190051_2190738_-	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	NA|133aa|down_5|NZ_CP053836.1_2190740_2191139_-	PRK00202, nusB, transcription antitermination factor NusB	NA|157aa|down_6|NZ_CP053836.1_2191140_2191611_-	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|267aa|down_7|NZ_CP053836.1_2191639_2192440_-	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional	NA|564aa|down_8|NZ_CP053836.1_2192436_2194128_-	pfam02254, TrkA_N, TrkA-N domain	NA|126aa|down_9|NZ_CP053836.1_2194138_2194516_-	NA
GCF_013201825.1_ASM1320182v1	NZ_CP053836	Halarcobacter ebronensis strain LMG 27922 chromosome, complete genome	4	2409962-2410127	4	CRISPRCasFinder	no		cas3,cas4,PrimPol,DEDDh,RT,cas2,cas1,cas9,csa3	Orphan	TTTTAAAGGAATCCACTTCTTTTATAATTTCTTTCAACAAAATAGCGAAGCTATC	55	0	0	NA	NA	NA	1	1	Orphan	cas3,cas4,PrimPol,DEDDh,RT,cas2,cas1,cas9,csa3	NA,NA|147aa|down_1|NZ_CP053836.1_2412280_2412721_-	NA|295aa|up_9|NZ_CP053836.1_2399790_2400675_-	PRK00089, era, GTPase Era; Reviewed	NA|500aa|up_8|NZ_CP053836.1_2400726_2402226_-	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|172aa|up_7|NZ_CP053836.1_2402313_2402829_-	PRK00150, def, peptide deformylase; Reviewed	NA|195aa|up_6|NZ_CP053836.1_2402837_2403422_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|434aa|up_5|NZ_CP053836.1_2403437_2404739_-	PRK01490, tig, trigger factor; Provisional	NA|560aa|up_4|NZ_CP053836.1_2404885_2406565_+	cd01467, vWA_BatA_type, VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|374aa|up_3|NZ_CP053836.1_2406567_2407689_-	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|308aa|up_2|NZ_CP053836.1_2407695_2408619_-	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|381aa|up_1|NZ_CP053836.1_2408634_2409777_-	cd06829, PLPDE_III_CANSDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Carboxynorspermidine Decarboxylase	NA|56aa|up_0|NZ_CP053836.1_2409766_2409934_-	cd00730, rubredoxin, Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center	NA|399aa|down_0|NZ_CP053836.1_2410272_2411469_-	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|147aa|down_1|NZ_CP053836.1_2412280_2412721_-	NA	NA|229aa|down_2|NZ_CP053836.1_2412875_2413562_-	pfam16264, SatD, SatD family (SatD)	NA|224aa|down_3|NZ_CP053836.1_2414291_2414963_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|422aa|down_4|NZ_CP053836.1_2414983_2416249_-	PRK03868, PRK03868, glucose-6-phosphate isomerase; Provisional	NA|209aa|down_5|NZ_CP053836.1_2416264_2416891_-	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional	NA|607aa|down_6|NZ_CP053836.1_2416887_2418708_-	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|232aa|down_7|NZ_CP053836.1_2418704_2419400_-	cd01400, 6PGL, 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate	NA|488aa|down_8|NZ_CP053836.1_2419389_2420853_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|280aa|down_9|NZ_CP053836.1_2420906_2421746_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
